RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 CMTM6Q9NX76 183 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 ADA2Q9NZK5 511 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 MAT2BQ9NZL9 334 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 NXT1Q9UKK6 140 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 FARSAQ9Y285 508 aaKnown RBP13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 AHCTF1Q8WYP5 2266 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 CCDC88CQ9P219 2028 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 AKAP13Q12802 2813 aa13.18□□□□□ -0.3
HERPUD1-203ENST00000379792 RNF103-CHMP3A0A140T963 221 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 C17orf105B2RV13 164 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 NPPAP01160 153 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 ZCCHC18P0CG32 403 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 UQCRC2P22695 453 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 DLSTP36957 453 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 FOLR3P41439 243 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 OR4D2P58180 307 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 RPS26P62854 115 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 DNASE1L3Q13609 305 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 TP53BP2Q13625 1128 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 MAP7Q14244 749 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 SFT2D3Q587I9 215 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 ANGPTL8Q6UXH0 198 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 GALNT12Q8IXK2 581 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 SLC15A3Q8IY34 581 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 C10orf111Q8N326 155 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 OR2Y1Q8NGV0 311 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 DNAJB8Q8NHS0 232 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 ZFP90Q8TF47 636 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 PTPMT1Q8WUK0 201 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 METTL21AQ8WXB1 218 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 TMEM125Q96AQ2 219 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 HOPXQ9BPY8 73 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 CPPED1Q9BRF8 314 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 THTPAQ9BU02 230 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 CNPPD1Q9BV87 410 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 C1orf21Q9H246 121 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 LRMDAQ9H2I8 198 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 TPT1P8Q9HAU6 139 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 ZCCHC3Q9NUD5 404 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 EPG5Q9HCE0 2579 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 UPK1AO00322 258 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 NME4O00746 187 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 GSC2O15499 205 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 SSTR4P31391 388 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 SOX11P35716 441 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 RPS15P62841 145 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 COX20Q5RI15 118 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 IGF2-ASQ6U949 168 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 ASRGL1Q7L266 308 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 C6orf120Q7Z4R8 191 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 WDR53Q7Z5U6 358 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 VWA5B2Q8N398 1253 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 IL22RA1Q8N6P7 574 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 TRIML2Q8N7C3 387 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 ZNF321PQ8N8H1 164 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 OTUB1Q96FW1 271 aaPredicted RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 YIPF4Q9BSR8 244 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 EPS8L2Q9H6S3 715 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 EQTNQ9NQ60 294 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 THSD1Q9NS62 852 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 DDX18Q9NVP1 670 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 NDE1Q9NXR1 346 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 TCFL5Q9UL49 500 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 ERVK-19Q9WJR5 959 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 MRPS18BQ9Y676 258 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 CLCA3PQ9Y6N3 262 aa13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 MAP1BP46821 2468 aaKnown RBP13.17□□□□□ -0.3
HERPUD1-203ENST00000379792 ASPMQ8IZT6 3477 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 NUP210LQ5VU65 1888 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 EMC8O43402 210 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 PDE5AO76074 875 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 DXOO77932 396 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 SORBS2O94875 1100 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 RAB40ALP0C0E4 278 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 S1PR1P21453 382 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 CD82P27701 267 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 MSX2P35548 267 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 PGM1P36871 562 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 EEF1A2Q05639 463 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 MAP4K2Q12851 820 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 BIKQ13323 160 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 ELAVL1Q15717 326 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 FHL5Q5TD97 284 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 BNC2Q6ZN30 1099 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 RNF130Q86XS8 419 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 NUP43Q8NFH3 380 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 FBXO30Q8TB52 745 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 ZNF675Q8TD23 568 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 CTHRC1Q96CG8 243 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 C16orf58Q96GQ5 468 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 C3orf14Q9HBI5 128 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 SPAG4Q9NPE6 437 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 IL17BQ9UHF5 180 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 USP22Q9UPT9 525 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 L3MBTL1Q9Y468 752 aa13.16□□□□□ -0.3
HERPUD1-203ENST00000379792 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.15□□□□□ -0.3
HERPUD1-203ENST00000379792 PLOD2O00469 737 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms