RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 TO15178 435 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 SLC16A5O15375 505 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 NAPRTQ6XQN6 538 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 ASRGL1Q7L266 308 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 TRIM46Q7Z4K8 759 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 NPAS4Q8IUM7 802 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 PCED1BQ96HM7 432 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 A8MV72 311 aaPredicted RBP8.03□□□□□ -1.12
HSPG2-203ENST00000374695 SPATA31C1P0DKV0 1188 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 TAS2R39P59534 338 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 FLI1Q01543 452 aaPredicted RBP8.03□□□□□ -1.12
HSPG2-203ENST00000374695 APOBEC3HQ6NTF7 200 aaKnown RBP8.03□□□□□ -1.12
HSPG2-203ENST00000374695 FUT10Q6P4F1 479 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 TEX26Q8N6G2 289 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 CHDHQ8NE62 594 aaPredicted RBP8.03□□□□□ -1.12
HSPG2-203ENST00000374695 SLC22A8Q8TCC7 542 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 C2orf42Q9NWW7 574 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 CNTN5O94779 1100 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 C6orf47O95873 294 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 ODF4Q2M2E3 257 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 VARS2Q5ST30 1063 aaKnown RBP8.03□□□□□ -1.12
HSPG2-203ENST00000374695 TMEM139Q8IV31 216 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 OR9A1PQ8NGU1 263 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 SAMD11Q96NU1 681 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 ACTRT3Q9BYD9 372 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 LUZP4Q9P127 313 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 BPIP17213 487 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 LINGO4Q6UY18 593 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 GALNT10Q86SR1 603 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 DEDD2Q8WXF8 326 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 CENPOQ9BU64 300 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 IRS2Q9Y4H2 1338 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 UPK3BL1B0FP48 263 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 UPK3BL2E5RIL1 263 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 HAS3O00219 553 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 KIAA0513O60268 411 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 MPP7Q5T2T1 576 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 AWAT2Q6E213 333 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 IQCF1Q8N6M8 205 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 SLC25A44Q96H78 314 aaPredicted RBP8.03□□□□□ -1.12
HSPG2-203ENST00000374695 ZNF559Q9BR84 538 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 A0A0A6YYH2 397 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 A6NJ64 397 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 STMND1H3BQB6 276 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 MEN1O00255 615 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 MITFO75030 526 aaPredicted RBP8.03□□□□□ -1.12
HSPG2-203ENST00000374695 CCNOP22674 350 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 RNASE10Q5GAN6 216 aaKnown RBP8.03□□□□□ -1.12
HSPG2-203ENST00000374695 CCNJQ5T5M9 372 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 SLC2A7Q6PXP3 512 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 CILP2Q8IUL8 1156 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 LGALS12Q96DT0 336 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 ZNF382Q96SR6 550 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 WDR77Q9BQA1 342 aaPredicted RBP8.03□□□□□ -1.12
HSPG2-203ENST00000374695 SUV39H2Q9H5I1 410 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 REEP4Q9H6H4 257 aa8.03□□□□□ -1.12
HSPG2-203ENST00000374695 A8MT66 165 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 CSF2P04141 144 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 ZNF136P52737 540 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 DTLQ9NZJ0 730 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 TMEM59LQ9UK28 342 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 GOSR2O14653 212 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 LEPRP48357 1165 aaKnown RBP8.02□□□□□ -1.12
HSPG2-203ENST00000374695 SEC13P55735 322 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 PER3P56645 1201 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 ZNF776Q68DI1 518 aaPredicted RBP8.02□□□□□ -1.12
HSPG2-203ENST00000374695 C15orf52Q6ZUT6 534 aaKnown RBP8.02□□□□□ -1.12
HSPG2-203ENST00000374695 OR10T2Q8NGX3 314 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 SPTSSAQ969W0 71 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 PGAM5Q96HS1 289 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 CDK15Q96Q40 435 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 ZNF286AQ9HBT8 521 aa8.02□□□□□ -1.12
HSPG2-203ENST00000374695 HTRA2O43464 458 aaPredicted RBP8.02□□□□□ -1.13
HSPG2-203ENST00000374695 NRROSQ86YC3 692 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 FRZBQ92765 325 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 ZNF597Q96LX8 424 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 DPCDQ9BVM2 203 aaPredicted RBP8.02□□□□□ -1.13
HSPG2-203ENST00000374695 CARS2Q9HA77 564 aaKnown RBP8.02□□□□□ -1.13
HSPG2-203ENST00000374695 SLC22A14Q9Y267 594 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 CELP19835 753 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 CLCNKBP51801 687 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 RPL23AP62750 156 aaKnown RBP8.02□□□□□ -1.13
HSPG2-203ENST00000374695 BBS1Q8NFJ9 593 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 PHOSPHO1Q8TCT1 267 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 SFXN5Q8TD22 340 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 NANOS1Q8WY41 292 aaKnown RBP8.02□□□□□ -1.13
HSPG2-203ENST00000374695 KCNJ9Q92806 393 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 MAL2Q969L2 176 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 KIAA1143Q96AT1 154 aaPredicted RBP8.02□□□□□ -1.13
HSPG2-203ENST00000374695 RNF32Q9H0A6 362 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 DOCK6Q96HP0 2047 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 RNF212BA8MTL3 300 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 SOX1O00570 391 aaPredicted RBP8.02□□□□□ -1.13
HSPG2-203ENST00000374695 TMEM225Q6GV28 225 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 SHDQ96IW2 340 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.02□□□□□ -1.137e-7■■■□□ 15.5
HSPG2-203ENST00000374695 MEAF6Q9HAF1 191 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 PPP4R1LQ9P1A2 415 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 SMIM28A0A1B0GU29 152 aa8.02□□□□□ -1.13
HSPG2-203ENST00000374695 P2RX6O15547 441 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms