RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 CSNK1DP48730 415 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 RPL13AP3Q6NVV1 102 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 JPH3Q8WXH2 748 aaPredicted RBP16.57■□□□□ 0.24
PTPRU-202ENST00000373779 SLA2Q9H6Q3 261 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 MYNNQ9NPC7 610 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 POLE3Q9NRF9 147 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 ABCA3Q99758 1704 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 C12orf71A8MTZ7 269 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 M0R3H8 397 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 UBXN7O94888 489 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 CPNE6O95741 557 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 C1QAP02745 245 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 FPGSQ05932 587 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 RNF111Q6ZNA4 994 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 UBE2Q1Q7Z7E8 422 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 TMEM25Q86YD3 366 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 METTL4Q8N3J2 472 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 KXD1Q9BQD3 176 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 NUFIP1Q9UHK0 495 aaKnown RBP16.57■□□□□ 0.24
PTPRU-202ENST00000373779 CDK5RAP2Q96SN8 1893 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 A0A0G2JPF8 293 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 HNRNPCL3B7ZW38 293 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 HNRNPCL4P0DMR1 293 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 IGFALSP35858 605 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 CTSOP43234 321 aaPredicted RBP16.57■□□□□ 0.24
PTPRU-202ENST00000373779 PSMA6P60900 246 aaKnown RBP16.57■□□□□ 0.24
PTPRU-202ENST00000373779 ACTC1P68032 377 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 ACTA1P68133 377 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 ID2Q02363 134 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 SEC23BQ15437 767 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 ZNF791Q3KP31 576 aaPredicted RBP16.57■□□□□ 0.24
PTPRU-202ENST00000373779 CEP68Q76N32 757 aa16.57■□□□□ 0.24
PTPRU-202ENST00000373779 A0A1B0GVT2 93 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 LYRM1O43325 122 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 CACNG3O60359 315 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 C6P13671 934 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 ZNF823P16415 610 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 ACVR1Q04771 509 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 PUM1Q14671 1186 aaKnown RBP eCLIP16.56■□□□□ 0.24
PTPRU-202ENST00000373779 NTRK2Q16620 822 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 TMEM35AQ53FP2 167 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 ANKK1Q8NFD2 765 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 RNASE11Q8TAA1 199 aaKnown RBP16.56■□□□□ 0.24
PTPRU-202ENST00000373779 MAU2Q9Y6X3 613 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 MCCD1P59942 119 aaPredicted RBP16.56■□□□□ 0.24
PTPRU-202ENST00000373779 UBE2UQ5VVX9 321 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 ZNF227Q86WZ6 799 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 RPLP0P6Q8NHW5 317 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 C12orf4Q9NQ89 552 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 PSORS1C1Q9UIG5 152 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 ADORA3P0DMS8 318 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 TNFSF8P32971 234 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 FRMPD2BQ6IN97 320 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 TIGD4Q8IY51 512 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 OR8J2Q8NGG1 315 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 CHFRQ96EP1 664 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 OR4K3Q96R72 315 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 KDM4BO94953 1096 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 CFL1P23528 166 aaKnown RBP16.56■□□□□ 0.24
PTPRU-202ENST00000373779 MAPK3P27361 379 aaPredicted RBP16.56■□□□□ 0.24
PTPRU-202ENST00000373779 AKT2P31751 481 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 SLC25A24Q6NUK1 477 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 QSOX2Q6ZRP7 698 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 HSD11B1LQ7Z5J1 315 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 ZNF385DQ9H6B1 395 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 TAPBPO15533 448 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 DDCP20711 480 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 SYT6Q5T7P8 510 aaPredicted RBP16.56■□□□□ 0.24
PTPRU-202ENST00000373779 SLC44A3Q8N4M1 653 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 Q9N2J8 555 aa16.56■□□□□ 0.24
PTPRU-202ENST00000373779 SLC22A31A6NKX4 558 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 RHOP08100 348 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 HTR1AP08908 422 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 ADPRMQ3LIE5 342 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 SNAP47Q5SQN1 464 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 PGBD2Q6P3X8 592 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 TAS1R1Q7RTX1 841 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 NOXA1Q86UR1 476 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 ELMOD2Q8IZ81 293 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 ZNF527Q8NB42 609 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 DGAT2Q96PD7 388 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 INSL6Q9Y581 213 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 TCRBV5S2A0A599 114 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 ZNF234Q14588 700 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 TOMM20Q15388 145 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 TBC1D25Q3MII6 688 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 HSD17B12Q53GQ0 312 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 CNIH2Q6PI25 160 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 SDR16C5Q8N3Y7 309 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 CASD1Q96PB1 797 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 PELI2Q9HAT8 420 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 UBQLN2Q9UHD9 624 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 POU6F2P78424 691 aaPredicted RBP16.55■□□□□ 0.24
PTPRU-202ENST00000373779 BCL7AQ4VC05 210 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 PAQR7Q86WK9 346 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 HYLS1Q96M11 299 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 SLC2A11Q9BYW1 496 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 TMEM30AQ9NV96 361 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 FBXL12Q9NXK8 326 aa16.55■□□□□ 0.24
PTPRU-202ENST00000373779 KANTRA0A1W2PQU2 76 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms