RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SF3A2Q15428 464 aaKnown RBP15.71■□□□□ 0.11
PTCH1-201ENST00000331920 VSIG10LQ86VR7 867 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 ZNF821O75541 412 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-201ENST00000331920 MT-ND2P03891 347 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 HLA-DQB2P05538 268 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 G6PDP11413 515 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 APLNRP35414 380 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 TFGQ92734 400 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-201ENST00000331920 RPF2Q9H7B2 306 aaKnown RBP15.71■□□□□ 0.11
PTCH1-201ENST00000331920 RHBDD3Q9Y3P4 386 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 ASB3Q9Y575 518 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 HECW2Q9P2P5 1572 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 HK3P52790 923 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 SNTB2Q13425 540 aaKnown RBP15.71■□□□□ 0.11
PTCH1-201ENST00000331920 GINS1Q14691 196 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 ANKRD54Q6NXT1 300 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 CDH20Q9HBT6 801 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 LOXHD1Q8IVV2 1947 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 IMPDH1P20839 514 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 ART1P52961 327 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 TECPR1Q7Z6L1 1165 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 OR2B2Q9GZK3 357 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 SPATA31C2B4DYI2 1134 aa15.71■□□□□ 0.1
PTCH1-201ENST00000331920 CYB5BO43169 146 aa15.71■□□□□ 0.1
PTCH1-201ENST00000331920 KCNC1P48547 511 aa15.71■□□□□ 0.1
PTCH1-201ENST00000331920 CRYZQ08257 329 aaKnown RBP15.71■□□□□ 0.1
PTCH1-201ENST00000331920 CREB3L2Q70SY1 520 aa15.71■□□□□ 0.1
PTCH1-201ENST00000331920 C10orf82Q8WW14 230 aa15.71■□□□□ 0.1
PTCH1-201ENST00000331920 MYLIPQ8WY64 445 aa15.71■□□□□ 0.1
PTCH1-201ENST00000331920 IRGQQ8WZA9 623 aa15.71■□□□□ 0.1
PTCH1-201ENST00000331920 TXNDC15Q96J42 360 aa15.71■□□□□ 0.1
PTCH1-201ENST00000331920 FEZF1A0PJY2 475 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 RAB30Q15771 203 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 PCGF3Q3KNV8 242 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 SHFQ7M4L6 423 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 HS3ST5Q8IZT8 346 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 CCDC32Q9BV29 185 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 RBM24Q9BX46 236 aaKnown RBP15.7■□□□□ 0.1
PTCH1-201ENST00000331920 DEFB126Q9BYW3 111 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 VSTM2BA6NLU5 285 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 APOFQ13790 326 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 IRF2BP2Q7Z5L9 587 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 KREMEN1Q96MU8 473 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 F5H5K5 113 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 CRYZL1O95825 349 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 SNRNP70P08621 437 aaKnown RBP15.7■□□□□ 0.1
PTCH1-201ENST00000331920 LIPCP11150 499 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 HLA-EP13747 358 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 KITLGP21583 273 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 MPPED2Q15777 294 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 NPAS3Q8IXF0 933 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 NUP43Q8NFH3 380 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 IL31RAQ8NI17 732 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 NDNFQ8TB73 568 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 KCNJ16Q9NPI9 418 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 GHRLQ9UBU3 117 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 TTLL8A6PVC2 850 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 CEBPZOSA8MTT3 80 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 MMP8P22894 467 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 SFTPDP35247 375 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 LEG1Q6P5S2 330 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 EGFL6Q8IUX8 553 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 FAM122AQ96E09 287 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 GALPQ9UBC7 116 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 SCML2Q9UQR0 700 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 LRRC42Q9Y546 428 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 ZNF182P17025 639 aaPredicted RBP15.7■□□□□ 0.1
PTCH1-201ENST00000331920 PITPNBP48739 271 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 C3orf38Q5JPI3 329 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 OR14L1PQ8NHC6 308 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 FAM46AQ96IP4 442 aaKnown RBP15.7■□□□□ 0.1
PTCH1-201ENST00000331920 TNFSF4P23510 183 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 SLAMF1Q13291 335 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 KCNIP4Q6PIL6 250 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 C3P1Q6ZMU1 363 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 CARM1Q86X55 608 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 TUBA1CQ9BQE3 449 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 SDHAF2Q9NX18 166 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 ACSL6Q9UKU0 697 aa15.7■□□□□ 0.1
PTCH1-201ENST00000331920 P04436 131 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 BPIP17213 487 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 WDR53Q7Z5U6 358 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-201ENST00000331920 ZBTB20Q9HC78 741 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-201ENST00000331920 MYO3AQ8NEV4 1616 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 TXNDC12O95881 172 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 TLDC1Q6P9B6 456 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 SERPINA12Q8IW75 414 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 SDCBP2Q9H190 292 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 PREBQ9HCU5 417 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 DLGAP4Q9Y2H0 992 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 RAB27BO00194 218 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 SERPINE2P07093 398 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 OR4D2P58180 307 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 PTCHD3Q3KNS1 767 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 REEP3Q6NUK4 255 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 TMEM71Q6P5X7 295 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 RNF111Q6ZNA4 994 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 ADAM19Q9H013 955 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 KCNK13Q9HB14 408 aa15.69■□□□□ 0.1
PTCH1-201ENST00000331920 FAM171A2A8MVW0 826 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms