RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SSTR2P30874 369 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 SSTR4P31391 388 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 KRT6CP48668 564 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 MAN2A2P49641 1150 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 TMED10P49755 219 aaKnown RBP16.32■□□□□ 0.2
HDDC3-201ENST00000330334 PMPCAQ10713 525 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 UNC50Q53HI1 259 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 HLA-DQA1Q5Y7H0 255 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 SLC22A9Q8IVM8 553 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 EIF1ADQ8N9N8 165 aaKnown RBP16.32■□□□□ 0.2
HDDC3-201ENST00000330334 FAM13CQ8NE31 585 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 CHTF18Q8WVB6 975 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 OR10A5Q9H207 317 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 ZNF703Q9H7S9 590 aaPredicted RBP16.32■□□□□ 0.2
HDDC3-201ENST00000330334 PNPLA3Q9NST1 481 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 RNF6Q9Y252 685 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 CFL2Q9Y281 166 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 STK38LQ9Y2H1 464 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 NPFFR2Q9Y5X5 522 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 LIPGQ9Y5X9 500 aa16.32■□□□□ 0.2
HDDC3-201ENST00000330334 TRGV5A0A0B4J1U4 118 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 A0A1W2PS29 197 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 MANBAO00462 879 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 WDR1O75083 606 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 TRIM3O75382 744 aaPredicted RBP16.31■□□□□ 0.2
HDDC3-201ENST00000330334 SUPT7LO94864 414 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 SNX4O95219 450 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 CELA3AP09093 270 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 CT62P0C5K7 136 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 NAGAP17050 411 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 IGFBP2P18065 325 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 TSPAN8P19075 237 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 CSNK2A2P19784 350 aaPredicted RBP16.31■□□□□ 0.2
HDDC3-201ENST00000330334 PRKAA2P54646 552 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 NRG3P56975 720 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 MGAT2Q10469 447 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 SLC29A2Q14542 456 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 RPS6KA2Q15349 733 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 PRICKLE4Q2TBC4 344 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 TEX35Q5T0J7 233 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 C6orf163Q5TEZ5 329 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 GBP7Q8N8V2 638 aaPredicted RBP16.31■□□□□ 0.2
HDDC3-201ENST00000330334 L3HYPDHQ96EM0 354 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 TTYH2Q9BSA4 534 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 DOHHQ9BU89 302 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 FAIM2Q9BWQ8 316 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 LDAHQ9H6V9 325 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 ZNF639Q9UID6 485 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 ACAD8Q9UKU7 415 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 CSMD2Q7Z408 3487 aa16.31■□□□□ 0.2
HDDC3-201ENST00000330334 LRRC3CA6NJW4 275 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 CDH16O75309 829 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 ULK1O75385 1050 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 OR4F21O95013 312 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 SNRPB2P08579 225 aaKnown RBP16.3■□□□□ 0.2
HDDC3-201ENST00000330334 RFPL3SP0C7P2 107 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 NT5EP21589 574 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 DEKP35659 375 aaKnown RBP16.3■□□□□ 0.2
HDDC3-201ENST00000330334 NUP107P57740 925 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 RPP38P78345 283 aaKnown RBP16.3■□□□□ 0.2
HDDC3-201ENST00000330334 CSTF3Q12996 717 aaKnown RBP16.3■□□□□ 0.2
HDDC3-201ENST00000330334 WLSQ5T9L3 541 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 PRAMEF20Q5VT98 475 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 B3GNT6Q6ZMB0 384 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 GPRIN3Q6ZVF9 776 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 VWA5B2Q8N398 1253 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 RPRMLQ8N4K4 120 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 CDYL2Q8N8U2 506 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 OR5M9Q8NGP3 310 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 OR5M3Q8NGP4 307 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 SPPL2AQ8TCT8 520 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 CTHRC1Q96CG8 243 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 NTNG2Q96CW9 530 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 TMEM237Q96Q45 408 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 ANGPTL4Q9BY76 406 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 KCNJ16Q9NPI9 418 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 PSMC3IPQ9P2W1 217 aaPredicted RBP16.3■□□□□ 0.2
HDDC3-201ENST00000330334 B4GALT7Q9UBV7 327 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 DCDC2Q9UHG0 476 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 MCM8Q9UJA3 840 aa16.3■□□□□ 0.2
HDDC3-201ENST00000330334 EML6Q6ZMW3 1958 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 SERTM1A2A2V5 107 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 FAM47E-STBD1D6RA91 191 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 TOXO94900 526 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 FAM153BP0C7A2 387 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 GLI4P10075 376 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 DRD2P14416 443 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 GABRA1P14867 456 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 ELAVL4P26378 380 aaKnown RBP16.29■□□□□ 0.2
HDDC3-201ENST00000330334 PKNOX1P55347 436 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 NAA20P61599 178 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 TFF3Q07654 80 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 LCP2Q13094 533 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 FAM153CQ494X1 144 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 TMEM198Q66K66 360 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 RTL6Q6ICC9 239 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 ZNF585AQ6P3V2 769 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 TMEM81Q6P7N7 255 aa16.29■□□□□ 0.2
HDDC3-201ENST00000330334 C1orf52Q8N6N3 182 aaKnown RBP16.29■□□□□ 0.2
HDDC3-201ENST00000330334 NEIL3Q8TAT5 605 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms