RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ATXN1LP0C7T5 689 aaKnown RBP16.4■□□□□ 0.22
CDCP1-201ENST00000296129 GRPRP30550 384 aa16.4■□□□□ 0.22
CDCP1-201ENST00000296129 MAZP56270 477 aaKnown RBP16.4■□□□□ 0.22
CDCP1-201ENST00000296129 GAS6Q14393 721 aa16.4■□□□□ 0.22
CDCP1-201ENST00000296129 OR8J1Q8NGP2 316 aa16.4■□□□□ 0.22
CDCP1-201ENST00000296129 ACTRT3Q9BYD9 372 aa16.4■□□□□ 0.22
CDCP1-201ENST00000296129 H0YJX3 145 aa16.4■□□□□ 0.22
CDCP1-201ENST00000296129 GPX3P22352 226 aa16.4■□□□□ 0.22
CDCP1-201ENST00000296129 CLDN2P57739 230 aa16.4■□□□□ 0.22
CDCP1-201ENST00000296129 MAD2L1BPQ15013 274 aaPredicted RBP16.4■□□□□ 0.22
CDCP1-201ENST00000296129 CDKL4Q5MAI5 379 aa16.4■□□□□ 0.22
CDCP1-201ENST00000296129 FGF13Q92913 245 aa16.4■□□□□ 0.22
CDCP1-201ENST00000296129 LRR1Q96L50 414 aa16.4■□□□□ 0.22
CDCP1-201ENST00000296129 FARSAQ9Y285 508 aaKnown RBP16.4■□□□□ 0.22
CDCP1-201ENST00000296129 DLGAP1O14490 977 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 LILRB3O75022 631 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 CCR7P32248 378 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 CSNK1DP48730 415 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 CTSCP53634 463 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 ZNF33BQ06732 778 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 ZNF283Q8N7M2 679 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 SPERTQ8NA61 448 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 NEIL3Q8TAT5 605 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 DHRS1Q96LJ7 313 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 SERINC2Q96SA4 455 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 UCKL1Q9NWZ5 548 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 CNOT11Q9UKZ1 510 aaKnown RBP16.39■□□□□ 0.21
CDCP1-201ENST00000296129 NPIPA2E9PIF3 369 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 NPIPA3F8WFD2 350 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 RLN2P04090 185 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 NDUFV2P19404 249 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 HOXD9P28356 352 aaPredicted RBP16.39■□□□□ 0.21
CDCP1-201ENST00000296129 CDK3Q00526 305 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 SPRED3Q2MJR0 410 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 ZNF829Q3KNS6 432 aaPredicted RBP16.39■□□□□ 0.21
CDCP1-201ENST00000296129 PLXDC1Q8IUK5 500 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 SLC44A3Q8N4M1 653 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 ADAMTS18Q8TE60 1221 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 FUZQ9BT04 418 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 TIGARQ9NQ88 270 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 TAF1P21675 1872 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 SLC19A2O60779 497 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 ADORA3P0DMS8 318 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 HS3ST5Q8IZT8 346 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDCP1-201ENST00000296129 MED11Q9P086 117 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 A0A1W2PPK0 400 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 CYP17A1P05093 508 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 PGCP20142 388 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 DRD1P21728 446 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 IST1P53990 364 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 IRF4Q15306 451 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 PLEKHG7Q6ZR37 379 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 SLC39A13Q96H72 371 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 ZNF717Q9BY31 904 aaPredicted RBP16.39■□□□□ 0.21
CDCP1-201ENST00000296129 METTL8Q9H825 291 aaKnown RBP16.39■□□□□ 0.21
CDCP1-201ENST00000296129 SRA1Q9HD15 236 aaKnown RBP16.39■□□□□ 0.21
CDCP1-201ENST00000296129 HTR3EA5X5Y0 456 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 RORAP35398 523 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 ACTC1P68032 377 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 ACTA1P68133 377 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 Q6ZSR6 202 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 MYLIPQ8WY64 445 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 KIAA1143Q96AT1 154 aaPredicted RBP16.39■□□□□ 0.21
CDCP1-201ENST00000296129 MSLNLQ96KJ4 702 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 ACPTQ9BZG2 426 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 ZNF696Q9H7X3 374 aa16.39■□□□□ 0.21
CDCP1-201ENST00000296129 PPP6CO00743 305 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 SLITRK5O94991 958 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 SDC1P18827 310 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 ARPC4P59998 168 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 FAM69BQ5VUD6 431 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 DTWD1Q8N5C7 304 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 OR4C15Q8NGM1 316 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 ZBTB20Q9HC78 741 aaPredicted RBP16.38■□□□□ 0.21
CDCP1-201ENST00000296129 VNN3Q9NY84 501 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 CD207Q9UJ71 328 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 SLC1A7O00341 560 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 PNCKQ6P2M8 343 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 DGLUCYQ7Z3D6 616 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 TMIEQ8NEW7 156 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 OR9A2Q8NGT5 310 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 ARNT2Q9HBZ2 717 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 PAK1IP1Q9NWT1 392 aaPredicted RBP16.38■□□□□ 0.21
CDCP1-201ENST00000296129 GPR83Q9NYM4 423 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 TMEM181Q9P2C4 612 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 SUSD2Q9UGT4 822 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 LAMA4Q16363 1823 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 PRH1P02810 166 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 C1SP09871 688 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 T-ENOLP0DO92 83 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 S1PR1P21453 382 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 HLA-FP30511 346 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 GRM7Q14831 915 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 SLC5A8Q8N695 610 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 SAMD12Q8N8I0 201 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 SLC37A3Q8NCC5 494 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 MMP27Q9H306 513 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 H2BFMP0C1H6 154 aa16.38■□□□□ 0.21
CDCP1-201ENST00000296129 PRKCAP17252 672 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms