RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 OR4E2Q8NGC2 313 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 SUN3Q8TAQ9 357 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 APOOQ9BUR5 198 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 POLR2J3Q9H1A7 115 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 IRAK4Q9NWZ3 460 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 SLC17A4Q9Y2C5 497 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 ISM1B1AKI9 464 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 FAAHO00519 579 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 UGT2B17O75795 530 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 AIFM1O95831 613 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 EPPINO95925 133 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 ATP5A1P25705 553 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 PPP2R1BP30154 601 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 BUD31P41223 144 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 KIR2DL1P43626 348 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 XKP51811 444 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 LBX1P52954 281 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 PODNL1Q6PEZ8 512 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 SYCE2Q6PIF2 218 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 Q96MT0 163 aa17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 TRNAU1APQ9NX07 287 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-201ENST00000291842 KPNA4O00629 521 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 CKMT1AP12532 417 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 EIF2DP41214 584 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 UGT2B15P54855 530 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 PPP2CBP62714 309 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 TRA2BP62995 288 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 SNRPNP63162 240 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 PPP2CAP67775 309 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 TEKQ02763 1124 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 MLC1Q15049 377 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 TSTQ16762 297 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 ZNF404Q494X3 552 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 TMEM35AQ53FP2 167 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 TTLQ8NG68 377 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 OR6T1Q8NGN1 323 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 APOBEC3BQ9UH17 382 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 MGAT4BQ9UQ53 548 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 POM121BA6NF01 834 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 EFCAB10A6NFE3 127 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 DSCR3O14972 297 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 PRICKLE3O43900 615 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 AK4P27144 223 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 RAB15P59190 212 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 ILKQ13418 452 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 OXA1LQ15070 435 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 GPAT3Q53EU6 434 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 PLAG1Q6DJT9 500 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 KRT73Q86Y46 540 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 TCEANCQ8N8B7 351 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 RNF217Q8TC41 542 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 PPP1R14BQ96C90 147 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 DACH2Q96NX9 599 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 MGLLQ99685 303 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 CLEC2DQ9UHP7 191 aa17.31■□□□□ 0.36
SHKBP1-201ENST00000291842 CEP290O15078 2479 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 SH3D21A4FU49 640 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 H0Y8X5 98 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 ADPRHP54922 357 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 TMEM196Q5HYL7 178 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 NIPAL1Q6NVV3 410 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 USP43Q70EL4 1123 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 KCT2Q8NC54 265 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 RASSF5Q8WWW0 418 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 ZG16BQ96DA0 208 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 ZNF764Q96H86 408 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 DHRS1Q96LJ7 313 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 FNDC11Q9BVV2 318 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 MROQ9BYG7 248 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 CD93Q9NPY3 652 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 EHD3Q9NZN3 535 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 TBC1D29Q9UFV1 150 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 METTL15A6NJ78 407 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 FRS3O43559 492 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 PLRG1O43660 514 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 MPZL2O60487 215 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 DNTTP04053 509 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 CDH3P22223 829 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 UGT2B10P36537 528 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 GSTM5P46439 218 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 KHKP50053 298 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 TUBA1BP68363 451 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 FBXO43Q4G163 708 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 LINC00299Q6ZSB3 139 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 TUBA1AQ71U36 451 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 OR2L5Q8NG80 312 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 CRELD1Q96HD1 420 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 RAB11FIP5Q9BXF6 653 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 CDCA4Q9BXL8 241 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 TVP23BQ9NYZ1 205 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 ACAD8Q9UKU7 415 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 PCDHGA3Q9Y5H0 932 aa17.3■□□□□ 0.36
SHKBP1-201ENST00000291842 CACNB4O00305 520 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-201ENST00000291842 NTN1O95631 604 aa17.29■□□□□ 0.36
SHKBP1-201ENST00000291842 OXSR1O95747 527 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-201ENST00000291842 MC3RP41968 323 aa17.29■□□□□ 0.36
SHKBP1-201ENST00000291842 RELAQ04206 551 aa17.29■□□□□ 0.36
SHKBP1-201ENST00000291842 SHHQ15465 462 aa17.29■□□□□ 0.36
SHKBP1-201ENST00000291842 CASP12Q6UXS9 341 aa17.29■□□□□ 0.36
SHKBP1-201ENST00000291842 C11orf74Q86VG3 221 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms