RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 GTPBP2Q9BX10 602 aaKnown RBP3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 RAD21L1Q9H4I0 556 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 TXLNGQ9NUQ3 528 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 PARVAQ9NVD7 372 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 TAAR2Q9P1P5 351 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 RCC2Q9P258 522 aaKnown RBP3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 IL36AQ9UHA7 158 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 B3GALT5Q9Y2C3 310 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 MFHAS1Q9Y4C4 1052 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 NEUROG3Q9Y4Z2 214 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 BZW2Q9Y6E2 419 aaKnown RBP3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 SLCO1B1Q9Y6L6 691 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 SCN8AQ9UQD0 1980 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 FRYQ5TBA9 3013 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 KIF26BQ2KJY2 2108 aa3.37□□□□□ -1.87
CKS1BP3-201ENST00000600888 IGLV5-45A0A087WSX0 123 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 A6NCN8 305 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 K7ERQ8 282 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 TLR4O00206 839 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 GRID2O43424 1007 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 BUD23O43709 281 aaKnown RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 POP4O95707 220 aaKnown RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 GSRP00390 522 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 IGHV4-39P01824 125 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 PROS1P07225 676 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 SP1P08047 785 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 MYBL1P10243 752 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 NR1D1P20393 614 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 ANOS1P23352 680 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 HNRNPH3P31942 346 aaKnown RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 PCK1P35558 622 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 PSMB10P40306 273 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 PSMD8P48556 350 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 CSNK1DP48730 415 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 ARRB1P49407 418 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 CCNHP51946 323 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 NDST2P52849 883 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 METAP1P53582 386 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 MLLT10P55197 1068 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 C21orf59P57076 290 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 CD81P60033 236 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 SNRPD1P62314 119 aaKnown RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 TPM4P67936 248 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 OGDHQ02218 1023 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 KLHL30Q0D2K2 578 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 CNTN1Q12860 1018 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 IRF3Q14653 427 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 RFTN1Q14699 578 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 MEP1AQ16819 746 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 CDO1Q16878 200 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 PARP15Q460N3 678 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 ERMARDQ5T6L9 678 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 DNAJC24Q6P3W2 148 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 DCUN1D2Q6PH85 259 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 PLXDC2Q6UX71 529 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 CYP4V2Q6ZWL3 525 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZNF534Q76KX8 674 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 ERN2Q76MJ5 926 aaKnown RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 MARK2Q7KZI7 788 aaKnown RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZNF571Q7Z3V5 609 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 ABI3BPQ7Z7G0 1075 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 VPS36Q86VN1 386 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 HORMAD1Q86X24 394 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 EPHX4Q8IUS5 362 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 GBGT1Q8N5D6 347 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 CCDC185Q8N715 623 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 NIPA2Q8N8Q9 360 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 RBM15BQ8NDT2 890 aaKnown RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 DENND6BQ8NEG7 585 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 OR2AP1Q8NGE2 309 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 SAP25Q8TEE9 199 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 GANCQ8TET4 914 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 PPP4R1Q8TF05 950 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 HES6Q96HZ4 224 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 MCEEQ96PE7 176 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 BARD1Q99728 777 aaKnown RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 GHITMQ9H3K2 345 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 HAUS4Q9H6D7 363 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 LRRC19Q9H756 370 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 PDFQ9HBH1 243 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 MRPL47Q9HD33 250 aaKnown RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 DYRK4Q9NR20 520 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 GDF3Q9NR23 364 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 TAS2R14Q9NYV8 317 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 HPCAL4Q9UM19 191 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 FAF1Q9UNN5 650 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 EXO1Q9UQ84 846 aaKnown RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 PCDHGA1Q9Y5H4 931 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 SNX10Q9Y5X0 201 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 DMXL2Q8TDJ6 3036 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZFYVE26Q68DK2 2539 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 DSPP15924 2871 aaKnown RBP3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 PTPRQQ9UMZ3 2332 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 SPEGQ15772 3267 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 ZZEF1O43149 2961 aa3.36□□□□□ -1.87
CKS1BP3-201ENST00000600888 A0A087X0T9 212 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 A0A0G2JNG1 304 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 SPAARA0A1B0GVQ0 90 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 TSPAN11A1L157 253 aa3.35□□□□□ -1.87
CKS1BP3-201ENST00000600888 SYCE3A1L190 88 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms