RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 RBPJQ06330 500 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 MGAT2Q10469 447 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 PCLAFQ15004 111 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 ERCC6LQ2NKX8 1250 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 ZNF791Q3KP31 576 aaPredicted RBP20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 LIPMQ5VYY2 423 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 Q6ZPB1 254 aaPredicted RBP20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 FGD2Q7Z6J4 655 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 C10orf107Q8IVU9 208 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 GALNT12Q8IXK2 581 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 ZNF615Q8N8J6 731 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 ZNF441Q8N8Z8 693 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 BANPQ8N9N5 519 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 CCDC63Q8NA47 563 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 GOLM1Q8NBJ4 401 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 OR2M7Q8NG81 312 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 SH2D2AQ9NP31 389 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 MKS1Q9NXB0 559 aa20.62■□□□□ 0.89
GTF2F1-204ENST00000594965 OR6C76A6NM76 312 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 G3V3Y1 287 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 HS6ST1O60243 411 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 PCDH7O60245 1069 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 ZG16O60844 167 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 CCL3P10147 92 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 SERPINB3P29508 390 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 PTGER1P34995 402 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 PER3P56645 1201 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 C3AR1Q16581 482 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.61■□□□□ 0.898e-8■□□□□ 11
GTF2F1-204ENST00000594965 FAM180BQ6P0A1 224 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 SLC29A4Q7RTT9 530 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 SPPL2CQ8IUH8 684 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 GHDCQ8N2G8 530 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 SLC15A4Q8N697 577 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 SLC22A8Q8TCC7 542 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 APOPT1Q96IL0 206 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 SGCZQ96LD1 299 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 ZNF681Q96N22 645 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 GAL3ST4Q96RP7 486 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 ROPN1BQ9BZX4 212 aaPredicted RBP20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 ROPN1Q9HAT0 212 aaPredicted RBP20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 SIRT5Q9NXA8 310 aa20.61■□□□□ 0.89
GTF2F1-204ENST00000594965 CCDC151A5D8V7 595 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 ERAL1O75616 437 aaKnown RBP20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 CNR1P21554 472 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 NT5EP21589 574 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 TIA1P31483 386 aaKnown RBP eCLIP20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 FEN1P39748 380 aaKnown RBP20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 NR0B1P51843 470 aaKnown RBP20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 BTKQ06187 659 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 PRICKLE4Q2TBC4 344 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 SPIN4Q56A73 249 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 CMPK2Q5EBM0 449 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 GALNT18Q6P9A2 607 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 FAM111BQ6SJ93 734 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 OR52N2Q8NGI0 321 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 SPACA9Q96E40 222 aaPredicted RBP20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 CNRIP1Q96F85 164 aaPredicted RBP20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 FAIM2Q9BWQ8 316 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 GATA5Q9BWX5 397 aaPredicted RBP20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 EBPLQ9BY08 206 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 PARD6BQ9BYG5 372 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 SHCBP1LQ9BZQ2 653 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 OR10A5Q9H207 317 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 MAT2BQ9NZL9 334 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 SH3BGRL2Q9UJC5 107 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 TINAGQ9UJW2 476 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 DLGAP4Q9Y2H0 992 aa20.6■□□□□ 0.89
GTF2F1-204ENST00000594965 ZNF407Q9C0G0 2248 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 ESPNB1AK53 854 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 H3BQF6 201 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 CCL21O00585 134 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 TFECO14948 347 aaPredicted RBP20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 ATP1B1P05026 303 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 IL3P08700 152 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 FBXO45P0C2W1 286 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 CSNK2A2P19784 350 aaPredicted RBP20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 DEKP35659 375 aaKnown RBP20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 ALDH9A1P49189 494 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 ACSM2AQ08AH3 577 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 IFFO1Q0D2I5 559 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 DUSP8Q13202 625 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 CFAP157Q5JU67 520 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 ACSM2BQ68CK6 577 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 BNC2Q6ZN30 1099 aaPredicted RBP20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 MAMDC2Q7Z304 686 aaPredicted RBP20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 TRIM46Q7Z4K8 759 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 MREGQ8N565 214 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 SIMC1Q8NDZ2 872 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 C16orf78Q8WTQ4 265 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 ADIPOR1Q96A54 375 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 KLHL29Q96CT2 875 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 CCDC120Q96HB5 630 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 SACM1LQ9NTJ5 587 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 SLC17A7Q9P2U7 560 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 ZNF639Q9UID6 485 aa20.59■□□□□ 0.89
GTF2F1-204ENST00000594965 C2orf92A0A1B0GVN3 265 aa20.58■□□□□ 0.89
GTF2F1-204ENST00000594965 GOLGA6L10A6NI86 522 aa20.58■□□□□ 0.89
GTF2F1-204ENST00000594965 GLSO94925 669 aaPredicted RBP20.58■□□□□ 0.89
GTF2F1-204ENST00000594965 CREB1P16220 341 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms