RNA–Protein interactions for RNA: ENST00000535728.5

SPOCK3-225, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

APPRIS ALT2 TSL 5 BASIC

Gene SPOCK3, Length 2,007 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-225	ENST00000535728	TTLL4	Q14679	1199 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	TRAM1	Q15629	374 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	TPSAB1	Q15661	275 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	PTCHD3	Q3KNS1	767 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	SV2C	Q496J9	727 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	USP39	Q53GS9	565 aa	Known RBP	4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	AKIRIN2	Q53H80	203 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	SGO1	Q5FBB7	561 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	RNASE10	Q5GAN6	216 aa	Known RBP	4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	FAM69A	Q5T7M9	428 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	COL13A1	Q5TAT6	717 aa	Predicted RBP	4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	ZNF691	Q5VV52	312 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	HEPHL1	Q6MZM0	1159 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	AFTPH	Q6ULP2	937 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	CYHR1	Q6ZMK1	362 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	TMPRSS11A	Q6ZMR5	421 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	C16orf59	Q7L2K0	433 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	DCXR	Q7Z4W1	244 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	NAA40	Q86UY6	237 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	TMEM17	Q86X19	198 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	RNF130	Q86XS8	419 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	TP53INP2	Q8IXH6	220 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	TMEM192	Q8IY95	271 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	NRSN1	Q8IZ57	195 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	PELI3	Q8N2H9	469 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	SVBP	Q8N300	66 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	PRSS35	Q8N3Z0	413 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	NAT16	Q8N8M0	369 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	GPRC5A	Q8NFJ5	357 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	DNAJB8	Q8NHS0	232 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	C1orf216	Q8TAB5	229 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	BTN2A2	Q8WVV5	523 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	SLAMF9	Q96A28	289 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	LRR1	Q96L50	414 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	MRGPRX4	Q96LA9	322 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	SGCZ	Q96LD1	299 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	C3orf30	Q96M34	536 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	H2AFJ	Q9BTM1	129 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	HTATIP2	Q9BUP3	242 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	ADGRE3	Q9BY15	652 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	MRPL4	Q9BYD3	311 aa	Known RBP	4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	B3GNT5	Q9BYG0	378 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	TRIM54	Q9BYV2	358 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	ELOVL4	Q9GZR5	314 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	NIF3L1	Q9GZT8	377 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	TOLLIP	Q9H0E2	274 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	OSBPL2	Q9H1P3	480 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	SLC26A1	Q9H2B4	701 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	FZD8	Q9H461	694 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	NANS	Q9NR45	359 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	SIRT7	Q9NRC8	400 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	ZSCAN32	Q9NX65	697 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	CACNA2D2	Q9NY47	1150 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	SCN3B	Q9NY72	215 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	TAS2R10	Q9NYW0	307 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	NLGN3	Q9NZ94	848 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	ERVW-1	Q9UQF0	538 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	ZNF451	Q9Y4E5	1061 aa		4.59	□□□□□ -1.67
SPOCK3-225	ENST00000535728	CCL15-CCL14	A0A0B4J2E2	113 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728		A0A1W2PN81	502 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728		A0A1W2PPQ1	181 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	OR2AT4	A6NND4	320 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	AHRR	A9YTQ3	701 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	TSTD3	H0UI37	97 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	MASP2	O00187	686 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	ACKR2	O00590	384 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	SDHD	O14521	159 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	RGS10	O43665	173 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	LZTS3	O60299	673 aa	Predicted RBP	4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	HBP1	O60381	514 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	WBP4	O75554	376 aa	Known RBP	4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	RECQL5	O94762	991 aa	Predicted RBP	4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	PRSS23	O95084	383 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	NXPH2	O95156	264 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	PCDH8	O95206	1070 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	HSPA4L	O95757	839 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	SNAI1	O95863	264 aa	Predicted RBP	4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	IGHV2-5	P01817	119 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	LGALS2	P05162	132 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	HOXC6	P09630	235 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	CSF3	P09919	207 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	CYP4B1	P13584	511 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	HSD17B1	P14061	328 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	INSRR	P14616	1297 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	IFNGR1	P15260	489 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	HIST1H2AD	P20671	130 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	CNTF	P26441	200 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	PPP2R1B	P30154	601 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	FMO3	P31513	532 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	CHRNA7	P36544	502 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	ADCYAP1R1	P41586	468 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	MAPK9	P45984	424 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	RENBP	P51606	427 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	LIMK2	P53671	638 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	RPS7	P62081	194 aa	Known RBP	4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	HOXC5	Q00444	222 aa		4.58	□□□□□ -1.68
SPOCK3-225	ENST00000535728	FABP9	Q0Z7S8	132 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms