RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 CRHBPP24387 322 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 GSSP48637 474 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 CSNK2BP67870 215 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 NPRL3Q12980 569 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 RAPSNQ13702 412 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 TUBA3CQ13748 450 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 RAB39AQ14964 217 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 UBXN2BQ14CS0 331 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 PRSS53Q2L4Q9 553 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 COLEC12Q5KU26 742 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 SLC48A1Q6P1K1 146 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 TMEM107Q6UX40 140 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 SYT13Q7L8C5 426 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 ABI3BPQ7Z7G0 1075 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 LRRC25Q8N386 305 aaPredicted RBP10.17□□□□□ -0.78
SPIDR-222ENST00000524006 OR52J3Q8NH60 311 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 FAM81AQ8TBF8 368 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 SLC38A5Q8WUX1 472 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 NR4A3Q92570 626 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 C7orf34Q96L11 122 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 ZFYVE21Q9BQ24 234 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 MACROD1Q9BQ69 325 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 GABARAPL3Q9BY60 117 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 RBM38Q9H0Z9 239 aaKnown RBP10.17□□□□□ -0.78
SPIDR-222ENST00000524006 CXorf21Q9HAI6 301 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 PRDM7Q9NQW5 492 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 SLC2A4RGQ9NR83 387 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 SIRT3Q9NTG7 399 aaPredicted RBP10.17□□□□□ -0.78
SPIDR-222ENST00000524006 KLHL28Q9NXS3 571 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 NDUFAF4Q9P032 175 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 FBXL21Q9UKT6 434 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 CA14Q9ULX7 337 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 DUSP12Q9UNI6 340 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 CLCA2Q9UQC9 943 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 ASB4Q9Y574 426 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 PCDHGA8Q9Y5G5 932 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 CEPT1Q9Y6K0 416 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 CEP250Q9BV73 2442 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 GPR179Q6PRD1 2367 aa10.17□□□□□ -0.78
SPIDR-222ENST00000524006 A0A1W2PR48 441 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 OR2A25A4D2G3 310 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 ARRDC5A6NEK1 342 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 TRIM64A6NGJ6 449 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 A8MVJ9 347 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 PTGES3LE9PB15 166 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 H3BSA7 217 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 HMGN4O00479 90 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 FAAHO00519 579 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 RGS10O43665 173 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 PRAMEF10O60809 474 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 PRKRAO75569 313 aaKnown RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 TRMUO75648 421 aaKnown RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 CPNE6O95741 557 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 OXSR1O95747 527 aaPredicted RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 TBX6O95947 436 aaPredicted RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 IGLV3-19P01714 112 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 ALPPP05187 535 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 H1F0P07305 194 aaKnown RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 HOXB3P14651 431 aaPredicted RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 FMO3P31513 532 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 FEN1P39748 380 aaKnown RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 XCR1P46094 333 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 CDC42P60953 191 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 FOXK2Q01167 660 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 EEF1A2Q05639 463 aaKnown RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 GANABQ14697 944 aaKnown RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 LASP1Q14847 261 aaKnown RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 MICAQ29983 383 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 TPRG1LQ5T0D9 272 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 GPR107Q5VW38 600 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 C18orf63Q68DL7 685 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 ANKRD34AQ69YU3 496 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 MRM1Q6IN84 353 aaKnown RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 CCDC81Q6ZN84 652 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 Q6ZS52 159 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 GKN2Q86XP6 184 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 ERI1Q8IV48 349 aaKnown RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 NUP43Q8NFH3 380 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 OR4K14Q8NGD5 310 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 PSMA8Q8TAA3 256 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 CNIH3Q8TBE1 160 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 GPBAR1Q8TDU6 330 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 UTP15Q8TED0 518 aaKnown RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 IPCEF1Q8WWN9 437 aaPredicted RBP10.16□□□□□ -0.78
SPIDR-222ENST00000524006 RORBQ92753 470 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 ZNF566Q969W8 418 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 ISOC1Q96CN7 298 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 SHDQ96IW2 340 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 SPACA7Q96KW9 195 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 ZNF354BQ96LW1 612 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 MS4A4EQ96PG1 132 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 ALPK1Q96QP1 1244 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 OR2A14Q96R47 310 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 PITX2Q99697 317 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 MAPKAP1Q9BPZ7 522 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 FNDC11Q9BVV2 318 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 BTBD2Q9BX70 525 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 TIMMDC1Q9NPL8 285 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 EQTNQ9NQ60 294 aa10.16□□□□□ -0.78
SPIDR-222ENST00000524006 GPATCH2Q9NW75 528 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms