RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 NADK2Q4G0N4 442 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 HSP90AA5PQ58FG0 334 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 PAPPA-AS1Q5QFB9 102 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 GTF2H2CQ6P1K8 395 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 BHLHB9Q6PI77 547 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 NHLRC1Q6VVB1 395 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 ARHGAP22Q7Z5H3 698 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 PIGWQ7Z7B1 504 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 TMPRSS11BQ86T26 416 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 FJX1Q86VR8 437 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 CDR2LQ86X02 465 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 MEX3DQ86XN8 651 aaKnown RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 KMT5CQ86Y97 462 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 KLHDC8AQ8IYD2 350 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 CFAP206Q8IYR0 622 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 MUC20Q8N307 709 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 THAP8Q8NA92 274 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 ST7LQ8TDW4 575 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 SCFD1Q8WVM8 642 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 ABTB1Q969K4 478 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 AP2M1Q96CW1 435 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 CCDC51Q96ER9 411 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 THOC1Q96FV9 657 aaKnown RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 TMEM19Q96HH6 336 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 TM6SF1Q9BZW5 370 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 STRADBQ9C0K7 418 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 VN1R1Q9GZP7 353 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 UBTD1Q9HAC8 227 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 OLFML3Q9NRN5 406 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 PKD2L2Q9NZM6 624 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 TRIM10Q9UDY6 481 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 TRIP11Q15643 1979 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 ANK2Q01484 3957 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 TRAV19A0A0A6YYK7 116 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 A0A0B4J203 849 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 LY6G6EA0A0G2JKS1 128 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 A0A0G2JNG1 304 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 O00370 1275 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 GAPDHSO14556 408 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 CTDSPLO15194 276 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 MID1O15344 667 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 NVLO15381 856 aaKnown RBP4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 SSX5O60225 188 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 NOL3O60936 208 aaKnown RBP4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 HSF2BPO75031 334 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 WDR1O75083 606 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 SEMA4FO95754 770 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 TFAP2AP05549 437 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 DAOP14920 347 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 LIFP15018 202 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 FERP16591 822 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 CYP2A7P20853 494 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 LMO1P25800 156 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 HTR1EP28566 365 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 MARCKSP29966 332 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 AXLP30530 894 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 MNDAP41218 407 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 GLIPR1P48060 266 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 CASP9P55211 416 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 CX3CL1P78423 397 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 FOLH1Q04609 750 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 SLC34A1Q06495 639 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 IL10RBQ08334 325 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 CDC20Q12834 499 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 GAGE5Q13069 117 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 GAGE6Q13070 117 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 MFAP5Q13361 173 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 GAMTQ14353 236 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 KIR2DS5Q14953 304 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 CDKN3Q16667 212 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 ODF4Q2M2E3 257 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 TEX35Q5T0J7 233 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 ATF7IP2Q5U623 682 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 ZNF626Q68DY1 528 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 CYB5D1Q6P9G0 228 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 ABRAXAS1Q6UWZ7 409 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 ZNF517Q6ZMY9 492 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 PRSS42Q7Z5A4 293 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 ARHGAP24Q8N264 748 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 RBMXL3Q8N7X1 1067 aaKnown RBP4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 ZNF548Q8NEK5 533 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 OR4K1Q8NGD4 311 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 KIAA1524Q8TCG1 905 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 C16orf45Q96MC5 204 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 CYP2S1Q96SQ9 504 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 PKP4Q99569 1192 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 FAM213AQ9BRX8 229 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 OSBPL8Q9BZF1 889 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 API5Q9BZZ5 524 aaKnown RBP4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 ACTL8Q9H568 366 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 DNAJC4Q9NNZ3 241 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 PPANQ9NQ55 473 aaKnown RBP4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 GPR173Q9NS66 373 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 KLHL9Q9P2J3 617 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 DEC1Q9P2X7 70 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 LRWD1Q9UFC0 647 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 POU2F3Q9UKI9 436 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 MYO6Q9UM54 1294 aa4.31□□□□□ -1.72
HMGB1P23-201ENST00000518743 EXOC6BQ9Y2D4 811 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms