RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 SGK494L7N484 410 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 MYO1CO00159 1063 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 PGRMC1O00264 195 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CES2O00748 559 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 HAT1O14929 419 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CTSVO60911 334 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 PSIP1O75475 530 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 SLC25A12O75746 678 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 TUSC2O75896 110 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ZFAND5O76080 213 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CLDN1O95832 211 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 GUCA1CO95843 209 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 SLC16A8O95907 504 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 P04436 131 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 SP1P08047 785 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ELANEP08246 267 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ZSCAN5DPP0CG00 497 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ITGAMP11215 1152 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 COX6A1P12074 109 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 RNH1P13489 461 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ETS1P14921 441 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 IL1RNP18510 177 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 PGAM1P18669 254 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 GNAZP19086 355 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 TNFRSF1AP19438 455 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 PEBP1P30086 187 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 TLX1P31314 330 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CXCR5P32302 372 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 PTGS2P35354 604 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 PEX19P40855 299 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 SLC26A3P40879 764 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 HNF4AP41235 474 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 RPL21P46778 160 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 KCNJ5P48544 419 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 SSR4P51571 173 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ADARP55265 1226 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 RIPPLY3P57055 190 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 TBPL1P62380 186 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 RPP38P78345 283 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 MXRA7P84157 204 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 MAT1AQ00266 395 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 RELAQ04206 551 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ACVR1Q04771 509 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 TBL3Q12788 808 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CALCOCO2Q13137 446 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CTBP1Q13363 440 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 MSLNQ13421 630 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 NAE1Q13564 534 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 FASTKQ14296 549 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 SPDYE7PQ495Y7 208 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 DEFB134Q4QY38 66 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 TIGD2Q4W5G0 525 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ACSBG2Q5FVE4 666 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 PAGE2BQ5JRK9 111 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 SPANXN3Q5MJ09 141 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 FNDC7Q5VTL7 733 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ATG9BQ674R7 924 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 DUPD1Q68J44 220 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 PLAG1Q6DJT9 500 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 FBXO42Q6P3S6 717 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ARHGAP11AQ6P4F7 1023 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 TRIM40Q6P9F5 258 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 PAPD4Q6PIY7 484 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CCDC137Q6PK04 289 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 AGTRAPQ6RW13 159 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 IGFL2Q6UWQ7 119 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CLEC18BQ6UXF7 455 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 RAD9BQ6WBX8 426 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 VRK3Q8IV63 474 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CPNE9Q8IYJ1 553 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 OR4N4Q8N0Y3 316 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 BEST3Q8N1M1 668 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 TCAIMQ8N3R3 496 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 NKAPQ8N5F7 415 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 LRRC57Q8N9N7 239 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CLEC18CQ8NCF0 446 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 PDPRQ8NCN5 879 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 BBOF1Q8ND07 529 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 PPFIBP2Q8ND30 876 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CHDHQ8NE62 594 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 SRFBP1Q8NEF9 429 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 OR5L2Q8NGL0 311 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 GOT1L1Q8NHS2 421 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CREB3L4Q8TEY5 395 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 LPGAT1Q92604 370 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 RND1Q92730 232 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 DAZLQ92904 295 aaKnown RBP3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 UBE2E3Q969T4 207 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 SDCCAG3Q96C92 435 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 LINGO1Q96FE5 620 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 TSNARE1Q96NA8 513 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 GPR21Q99679 349 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 SLX1AQ9BQ83 275 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ZNF559Q9BR84 538 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 KIFC1Q9BW19 673 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ROGDIQ9GZN7 287 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 ATG10Q9H0Y0 220 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 P2RY12Q9H244 342 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 CDCP1Q9H5V8 836 aa3.52□□□□□ -1.85
HMGN1P11-201ENST00000508668 WDR41Q9HAD4 459 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms