RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ZNF223Q9UK11 482 aaPredicted RBP13.95□□□□□ -0.18
RNF4-210ENST00000508235 MAPRE3Q9UPY8 281 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 ERVK-19Q9WJR5 959 aa13.95□□□□□ -0.18
RNF4-210ENST00000508235 YARS2Q9Y2Z4 477 aaKnown RBP13.95□□□□□ -0.18
RNF4-210ENST00000508235 NBEAQ8NFP9 2946 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 TBX19O60806 448 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 BCAS2O75934 225 aaPredicted RBP13.94□□□□□ -0.18
RNF4-210ENST00000508235 SLITRK5O94991 958 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 TACR1P25103 407 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 NTSP30990 170 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 HPCAL1P37235 193 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 CD97P48960 835 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 FUT7Q11130 342 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 MAP4K2Q12851 820 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 ZNF169Q14929 603 aaPredicted RBP13.94□□□□□ -0.18
RNF4-210ENST00000508235 CEBPEQ15744 281 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 PRICKLE4Q2TBC4 344 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 IL23RQ5VWK5 629 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 DGAT2L6Q6ZPD8 337 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 LIX1Q8N485 282 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 ARFGAP2Q8N6H7 521 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 AMER2Q8N7J2 671 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 PIWIL2Q8TC59 973 aaKnown RBP13.94□□□□□ -0.18
RNF4-210ENST00000508235 ZNF675Q8TD23 568 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 PPCDCQ96CD2 204 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 EGLN2Q96KS0 407 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 C7orf26Q96N11 449 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 NPAS2Q99743 824 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 NUF2Q9BZD4 464 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 BRINP2Q9C0B6 783 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 REEP4Q9H6H4 257 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 ASIC5Q9NY37 505 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 PLA2G3Q9NZ20 509 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 CFL2Q9Y281 166 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 ATMQ13315 3056 aa13.94□□□□□ -0.18
RNF4-210ENST00000508235 A0A1W2PS29 197 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 ITGA10O75578 1167 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 JUNP05412 331 aaKnown RBP13.93□□□□□ -0.18
RNF4-210ENST00000508235 KITP10721 976 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 LBPP18428 481 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 PRPS1L1P21108 318 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 TRHRP34981 398 aaPredicted RBP13.93□□□□□ -0.18
RNF4-210ENST00000508235 CYB561P49447 251 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 TNFSF10P50591 281 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 SSR4P51571 173 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 SLC37A1P57057 533 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 OC90Q02509 493 aaPredicted RBP13.93□□□□□ -0.18
RNF4-210ENST00000508235 TUBA3CQ13748 450 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 MPEG1Q2M385 716 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 ZNF750Q32MQ0 723 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 TUBA3EQ6PEY2 450 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 PRICKLE2Q7Z3G6 844 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 GPALPP1Q8IXQ4 340 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 CCDC116Q8IYX3 515 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 TMEM156Q8N614 296 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 NATD1Q8N6N6 113 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 ZNF321PQ8N8H1 164 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 ZFP28Q8NHY6 868 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 THAP3Q8WTV1 239 aaPredicted RBP13.93□□□□□ -0.18
RNF4-210ENST00000508235 CTHRC1Q96CG8 243 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 PPP1R36Q96LQ0 422 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 PRPF18Q99633 342 aaKnown RBP13.93□□□□□ -0.18
RNF4-210ENST00000508235 C1orf50Q9BV19 199 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 AKTIPQ9H8T0 292 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 MAT2BQ9NZL9 334 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 GIMAP2Q9UG22 337 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 BAIAP2L1Q9UHR4 511 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 IGSF10Q6WRI0 2623 aa13.93□□□□□ -0.18
RNF4-210ENST00000508235 TTLL8A6PVC2 850 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 MYO1GB0I1T2 1018 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 AKAP10O43572 662 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 PRAMEF2O60811 474 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 SORBS2O94875 1100 aaKnown RBP13.92□□□□□ -0.18
RNF4-210ENST00000508235 CD96P40200 585 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 HLCSP50747 726 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 NCBP2P52298 156 aaKnown RBP eCLIP13.92□□□□□ -0.18
RNF4-210ENST00000508235 INAQ16352 499 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 PLEKHN1Q494U1 663 aaPredicted RBP13.92□□□□□ -0.18
RNF4-210ENST00000508235 HLA-DQA1Q5Y7H0 255 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 OGFOD2Q6N063 350 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 RPUSD3Q6P087 351 aaKnown RBP13.92□□□□□ -0.18
RNF4-210ENST00000508235 ZNF605Q86T29 641 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 WDR75Q8IWA0 830 aaKnown RBP13.92□□□□□ -0.18
RNF4-210ENST00000508235 C9orf40Q8IXQ3 194 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 SLC15A4Q8N697 577 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 SLC22A8Q8TCC7 542 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 CKAP2Q8WWK9 683 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 ASB15Q8WXK1 588 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 GFM2Q969S9 779 aaKnown RBP13.92□□□□□ -0.18
RNF4-210ENST00000508235 TP53INP1Q96A56 240 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 ZBED6CLQ96FA7 236 aaPredicted RBP13.92□□□□□ -0.18
RNF4-210ENST00000508235 MAGEB18Q96M61 343 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 OR10A5Q9H207 317 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 TRIM45Q9H8W5 580 aaPredicted RBP13.92□□□□□ -0.18
RNF4-210ENST00000508235 ATAD3AQ9NVI7 634 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 SH3BP4Q9P0V3 963 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 MARCOQ9UEW3 520 aaPredicted RBP13.92□□□□□ -0.18
RNF4-210ENST00000508235 PRODH2Q9UF12 536 aa13.92□□□□□ -0.18
RNF4-210ENST00000508235 EXO1Q9UQ84 846 aaKnown RBP13.92□□□□□ -0.18
RNF4-210ENST00000508235 PCDHGB6Q9Y5F9 930 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms