RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 NUDCD3Q8IVD9 361 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 DDIASQ8IXT1 998 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 OR5L2Q8NGL0 311 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 OR6Y1Q8NGX8 325 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 OR2T11Q8NH01 316 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 FAR1Q8WVX9 515 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 ASB15Q8WXK1 588 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 NR4A3Q92570 626 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 TMEM125Q96AQ2 219 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 METTL2AQ96IZ6 378 aaKnown RBP11.96□□□□□ -0.49
COL5A1-206ENST00000465877 FRMD6Q96NE9 622 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 TUBB1Q9H4B7 451 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 MYNNQ9NPC7 610 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 UTS2RQ9UKP6 389 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 ENTPD4Q9Y227 616 aa11.96□□□□□ -0.49
COL5A1-206ENST00000465877 WDR91A4D1P6 747 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 OR6C76A6NM76 312 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 A8MVJ9 347 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 PIP5K1BO14986 540 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 BIRC5O15392 142 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 SKAP2O75563 359 aaPredicted RBP11.95□□□□□ -0.5
COL5A1-206ENST00000465877 OR6B1O95007 311 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 SP1P08047 785 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 FGF4P08620 206 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 CSNK2A2P19784 350 aaPredicted RBP11.95□□□□□ -0.5
COL5A1-206ENST00000465877 FEN1P39748 380 aaKnown RBP11.95□□□□□ -0.5
COL5A1-206ENST00000465877 CASP8Q14790 479 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 HEPACAMQ14CZ8 416 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 CHI3L2Q15782 390 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 CES4AQ5XG92 561 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 SLC25A25Q6KCM7 469 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 GPALPP1Q8IXQ4 340 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 LRRC25Q8N386 305 aaPredicted RBP11.95□□□□□ -0.5
COL5A1-206ENST00000465877 VWA5B2Q8N398 1253 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 FAM98AQ8NCA5 519 aaKnown RBP11.95□□□□□ -0.5
COL5A1-206ENST00000465877 ST6GALNAC3Q8NDV1 305 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 PPP1R14CQ8TAE6 165 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 FAM76AQ8TAV0 307 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 SLC22A8Q8TCC7 542 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 EXOSC8Q96B26 276 aaKnown RBP11.95□□□□□ -0.5
COL5A1-206ENST00000465877 FCRL1Q96LA6 429 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 BRINP2Q9C0B6 783 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 WWTR1Q9GZV5 400 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 LRTM1Q9HBL6 345 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 PFDN4Q9NQP4 134 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 HPF1Q9NWY4 346 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 C1orf109Q9NX04 203 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 MAT2BQ9NZL9 334 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 EHD3Q9NZN3 535 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 PSME2Q9UL46 239 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 ERVK-11Q9UQG0 969 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 KLF13Q9Y2Y9 288 aaPredicted RBP11.95□□□□□ -0.5
COL5A1-206ENST00000465877 TRAF6Q9Y4K3 522 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF780BQ9Y6R6 833 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 NCKAP5O14513 1909 aa11.95□□□□□ -0.5
COL5A1-206ENST00000465877 UTP20O75691 2785 aaKnown RBP11.94□□□□□ -0.5
COL5A1-206ENST00000465877 ASPDHA6ND91 283 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 ANKUB1A6NFN9 424 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 LSM1O15116 133 aaKnown RBP11.94□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF354AO60765 605 aaPredicted RBP11.94□□□□□ -0.5
COL5A1-206ENST00000465877 SEC22BO75396 215 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 LYPLA1O75608 230 aaPredicted RBP11.94□□□□□ -0.5
COL5A1-206ENST00000465877 ZIC2O95409 532 aaPredicted RBP11.94□□□□□ -0.5
COL5A1-206ENST00000465877 CBX6O95503 412 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 NADKO95544 446 aaPredicted RBP11.94□□□□□ -0.5
COL5A1-206ENST00000465877 HSPA4LO95757 839 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 CRYABP02511 175 aaKnown RBP11.94□□□□□ -0.5
COL5A1-206ENST00000465877 SERPINE1P05121 402 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 LINC00032P0C843 101 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 DDCP20711 480 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 FUT7Q11130 342 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 MPP2Q14168 576 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 ELOAQ14241 798 aaKnown RBP11.94□□□□□ -0.5
COL5A1-206ENST00000465877 KIAA0040Q15053 153 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 LTB4RQ15722 352 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 MAPKAPK3Q16644 382 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 MPEG1Q2M385 716 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 PRICKLE4Q2TBC4 344 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 XKR7Q5GH72 579 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF324BQ6AW86 544 aaPredicted RBP11.94□□□□□ -0.5
COL5A1-206ENST00000465877 FAM71E1Q6IPT2 247 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 NOXRED1Q6NXP6 359 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 Q6ZSR9 355 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 IKBIPQ70UQ0 350 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 MDGA2Q7Z553 956 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 HOMEZQ8IX15 550 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 CLYBLQ8N0X4 340 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 CPSF7Q8N684 471 aaKnown RBP11.94□□□□□ -0.5
COL5A1-206ENST00000465877 ANKRD42Q8N9B4 389 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 PSD4Q8NDX1 1056 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF681Q96N22 645 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 CCT7Q99832 543 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 KCNK9Q9NPC2 374 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 TIMMDC1Q9NPL8 285 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 MIEF1Q9NQG6 463 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 GIMAP4Q9NUV9 329 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 ZDHHC2Q9UIJ5 367 aa11.94□□□□□ -0.5
COL5A1-206ENST00000465877 DOPEY2Q9Y3R5 2298 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 TMEM120BA0PK00 339 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 CLEC18AA5D8T8 446 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms