RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 ZBTB7AO95365 584 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 FGGP02679 453 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CD8BP10966 210 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 PFKFB1P16118 471 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 MATN1P21941 496 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ITGA3P26006 1051 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ERP29P30040 261 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 C21orf33P30042 268 aaPredicted RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 TM4SF1P30408 202 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CEACAM8P31997 349 aaPredicted RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 FDFT1P37268 417 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 MAGEA2P43356 314 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 KCNJ3P48549 501 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 NRG3P56975 720 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 HERV-K104P63124 156 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 VLDLRP98155 873 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 MTAPQ13126 283 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 BFSP2Q13515 415 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 HNF4GQ14541 408 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 GPNMBQ14956 572 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 MAPK11Q15759 364 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 GPR19Q15760 415 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 RAB30Q15771 203 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 FAM153CQ494X1 144 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 VPS26BQ4G0F5 336 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 SBK1Q52WX2 424 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 C3orf38Q5JPI3 329 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ARL6IP4Q66PJ3 421 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 REP15Q6BDI9 236 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 C11orf63Q6NUN7 778 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CLEC18BQ6UXF7 455 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 KYAT3Q6YP21 454 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 HFE2Q6ZVN8 426 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 GALNT10Q86SR1 603 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 NLRX1Q86UT6 975 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ALYREFQ86V81 257 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ZC3HC1Q86WB0 502 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ECHDC2Q86YB7 292 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 IRF2BP1Q8IU81 584 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 SNX29P2Q8IUI4 249 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 NRMQ8IXM6 262 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CLEC18CQ8NCF0 446 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CCNYQ8ND76 341 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CCDC54Q8NEL0 328 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 OR56A3Q8NH54 315 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 SETD6Q8TBK2 473 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 FAM222BQ8WU58 562 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 S100ZQ8WXG8 99 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 HGDQ93099 445 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 TMBIM1Q969X1 311 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 FAM46BQ96A09 425 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 C14orf79Q96F83 325 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 PRRC1Q96M27 445 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 LINC00052Q96N35 136 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 PTCHD1Q96NR3 888 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 COL21A1Q96P44 957 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 IL12RB2Q99665 862 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 NAA11Q9BSU3 229 aaPredicted RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 COLEC11Q9BWP8 271 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CADM1Q9BY67 442 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ALOXE3Q9BYJ1 711 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 PRDM6Q9NQX0 595 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ZNF223Q9UK11 482 aaPredicted RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 HSF4Q9ULV5 492 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ANGEL1Q9UNK9 670 aaKnown RBP4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ST3GAL5Q9UNP4 418 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 DYRK1BQ9Y463 629 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 CLIC4Q9Y696 253 aa4.73□□□□□ -1.65
EPHA3-202ENST00000452448 ZMYM6O95789 1325 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 KLF18A0A0U1RQI7 1052 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 A0A1W2PNR3 127 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 A0A1W2PQL4 384 aaPredicted RBP4.72□□□□□ -1.65
EPHA3-202ENST00000452448 CXorf65A6NEN9 183 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 TRIM13O60858 407 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 GADD45GO95257 159 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 BCL10O95999 233 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 SRPRAP08240 638 aaKnown RBP4.72□□□□□ -1.65
EPHA3-202ENST00000452448 ATXN1LP0C7T5 689 aaKnown RBP4.72□□□□□ -1.65
EPHA3-202ENST00000452448 ACO1P21399 889 aaKnown RBP4.72□□□□□ -1.65
EPHA3-202ENST00000452448 CYP2F1P24903 491 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 NDUFS1P28331 727 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 CD80P33681 288 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 CEACAM6P40199 344 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 ETV4P43268 484 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 IKZF1Q13422 519 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 CTTNQ14247 550 aaKnown RBP4.72□□□□□ -1.65
EPHA3-202ENST00000452448 QSER1Q2KHR3 1735 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 RNASE10Q5GAN6 216 aaKnown RBP4.72□□□□□ -1.65
EPHA3-202ENST00000452448 PCID2Q5JVF3 399 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 WIPI1Q5MNZ9 446 aaPredicted RBP4.72□□□□□ -1.65
EPHA3-202ENST00000452448 FBXW9Q5XUX1 488 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 KLHL17Q6TDP4 642 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 RAD9BQ6WBX8 426 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 RIPOR1Q6ZS17 1223 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 DHDDSQ86SQ9 333 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 TC2NQ8N9U0 490 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 COLGALT1Q8NBJ5 622 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 NLGN4YQ8NFZ3 816 aaPredicted RBP4.72□□□□□ -1.65
EPHA3-202ENST00000452448 OR8J3Q8NGG0 315 aa4.72□□□□□ -1.65
EPHA3-202ENST00000452448 OR11L1Q8NGX0 322 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms