RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 SLC6A5Q9Y345 797 aa3.36□□□□□ -1.87
C1GALT1-202ENST00000402468 ZNF175Q9Y473 711 aa3.36□□□□□ -1.87
C1GALT1-202ENST00000402468 KIF3AQ9Y496 699 aa3.36□□□□□ -1.87
C1GALT1-202ENST00000402468 TMEM89A2RUT3 159 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 RNF212BA8MTL3 300 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 LGALS8O00214 317 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 NTN3O00634 580 aaPredicted RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 ZNF749O43361 778 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 NOL3O60936 208 aaKnown RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 POP4O95707 220 aaKnown RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 DPEP1P16444 411 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 DNAJB1P25685 340 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 PPP2R1BP30154 601 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 CD86P42081 329 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 MTIF2P46199 727 aaKnown RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 NPY2RP49146 381 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 GPC3P51654 580 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 MTTPP55157 894 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 RPS4XP62701 263 aaKnown RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 RPS27AP62979 156 aaKnown RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 GABPB1Q06547 395 aaPredicted RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 HYAL1Q12794 435 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 ELAVL2Q12926 359 aaKnown RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 NFATC2Q13469 925 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 DPYSQ14117 519 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 PDIA5Q14554 519 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 CLPPQ16740 277 aaPredicted RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 HKDC1Q2TB90 917 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 AGKQ53H12 422 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 STEAP1BQ6NZ63 245 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 ZNF613Q6PF04 617 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 ARSKQ6UWY0 536 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 TMEM26Q6ZUK4 368 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 GOLGA7Q7Z5G4 137 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 RANBP3LQ86VV4 465 aaPredicted RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 GPBP1Q86WP2 473 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 SAMD12Q8N8I0 201 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 Q8NBF4 154 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 OR1K1Q8NGR3 316 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 C11orf52Q96A22 123 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 MOCOSQ96EN8 888 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 PRICKLE1Q96MT3 831 aaPredicted RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 DEFB118Q96PH6 123 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 RCHY1Q96PM5 261 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 TSPAN18Q96SJ8 248 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 PSMB7Q99436 277 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 NDUFAF3Q9BU61 184 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 WRAP53Q9BUR4 548 aaKnown RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 CXXC4Q9H2H0 198 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 PANK3Q9H999 370 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 IL1RAPQ9NPH3 570 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 SOHLH2Q9NX45 425 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 CNOT2Q9NZN8 540 aaKnown RBP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 MUTYHQ9UIF7 546 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 NIP7Q9Y221 180 aaKnown RBP eCLIP3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 RALGAPA1Q6GYQ0 2036 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 RAD54L2Q9Y4B4 1467 aa3.35□□□□□ -1.87
C1GALT1-202ENST00000402468 CACNA1FO60840 1977 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 TRGV8A0A0C4DH27 118 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 MEX3AA1L020 520 aaKnown RBP3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 ARHGEF33A8MVX0 844 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 A8MXK9 166 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 H7C423 109 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 AKR7A3O95154 331 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 ZNF10P21506 573 aaPredicted RBP3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 RPA1P27694 616 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 PRDX6P30041 224 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 SLC7A2P52569 658 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 HERVK_113P63132 956 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 ERVK-8P63133 956 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 NOP14P78316 857 aaKnown RBP3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 BNIP1Q12981 228 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 SCGB2A2Q13296 93 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 FAM182AQ5T1J6 154 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 RHBDD2Q6NTF9 364 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 METTL7BQ6UX53 244 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 UNC5DQ6UXZ4 953 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 DPY19L2P2Q6ZN68 376 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 NUFIP2Q7Z417 695 aaKnown RBP3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 P4HA3Q7Z4N8 544 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 CARM1Q86X55 608 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 MISPQ8IVT2 679 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 TEX9Q8N6V9 391 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 ZNF781Q8N8C0 355 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 OR1B1Q8NGR6 318 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 C11orf45Q8TAV5 145 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 NCLNQ969V3 563 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 RBM18Q96H35 190 aaKnown RBP3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 ACCSQ96QU6 501 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 JPH2Q9BR39 696 aaPredicted RBP3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 CHCHD5Q9BSY4 110 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 RBM24Q9BX46 236 aaKnown RBP3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 ERVK-6Q9BXR3 956 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 OCR1Q9BZK8 76 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 DPH5Q9H2P9 285 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 RPAP3Q9H6T3 665 aaPredicted RBP3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 NT5DC2Q9H857 520 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 VAT1LQ9HCJ6 419 aa3.34□□□□□ -1.87
C1GALT1-202ENST00000402468 GTSE1Q9NYZ3 720 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms