RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 WDR49Q8IV35 697 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 LINC00518Q8N0U6 118 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 PARP8Q8N3A8 854 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 RTL3Q8N8U3 475 aaKnown RBP2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 MSANTD4Q8NCY6 345 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 CHDHQ8NE62 594 aaPredicted RBP2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 OR4F5Q8NH21 305 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 ZPLD1Q8TCW7 415 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 HIST1H2ACQ93077 130 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 PNPLA2Q96AD5 504 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 SLCO4A1Q96BD0 722 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 NTNG2Q96CW9 530 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 RAB39BQ96DA2 213 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 CXorf58Q96LI9 332 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 GPR137Q96N19 417 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 PRAM1Q96QH2 718 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 FUNDC2Q9BWH2 189 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 ZBP1Q9H171 429 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 DCTPP1Q9H773 170 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 DCLRE1BQ9H816 532 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 FAM212BQ9NTI7 297 aaPredicted RBP2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 PRR34Q9NV39 138 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 DNAJC11Q9NVH1 559 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 AKAP7Q9P0M2 348 aaPredicted RBP2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 MTRRQ9UBK8 725 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 ZNF107Q9UII5 783 aaPredicted RBP2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 SLC6A5Q9Y345 797 aa2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 ZNF646O15015 1829 aaPredicted RBP2.14□□□□□ -2.07
RNU6-48P-201ENST00000384161 ADAMTS9Q9P2N4 1935 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 IGLV3-10A0A075B6K4 115 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 TRBV2A0A0J9YWF9 115 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 ZNF487B1APH4 448 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 PHF1O43189 567 aaPredicted RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 SRPX2O60687 465 aaPredicted RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 ZNF354AO60765 605 aaPredicted RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 ATP6V1G1O75348 118 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 BAG2O95816 211 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 GOT2P00505 430 aaKnown RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 PIGRP01833 764 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 GSTA1P08263 222 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 AREGP15514 252 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 ZNF131P52739 623 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 ADARP55265 1226 aaKnown RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 HERV-K104P63124 156 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 RPA4Q13156 261 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 MSLNQ13421 630 aaPredicted RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 ITPK1Q13572 414 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 RUNX3Q13761 415 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 KRT31Q15323 416 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 C17orf58Q2M2W7 97 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 ATAD3CQ5T2N8 411 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 DCAF12Q5T6F0 453 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 C1QTNF12Q5T7M4 302 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 TAF3Q5VWG9 929 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 WDR25Q64LD2 544 aaPredicted RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 CDC42EP5Q6NZY7 148 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 MFSD7Q6UXD7 560 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 RAPH1Q70E73 1250 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 MOB2Q70IA6 237 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 ZNF410Q86VK4 478 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 SERPINA12Q8IW75 414 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 HSCBQ8IWL3 235 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 COLGALT1Q8NBJ5 622 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 SPC24Q8NBT2 197 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 OR4A16Q8NH70 328 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 ST7LQ8TDW4 575 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 TBCKQ8TEA7 893 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 U2AF1L4Q8WU68 220 aaKnown RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 ZBED6CLQ96FA7 236 aaPredicted RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 TTYH2Q9BSA4 534 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 CXXC4Q9H2H0 198 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 PIGVQ9NUD9 493 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 FAM120CQ9NX05 1096 aaKnown RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 RAI14Q9P0K7 980 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 NARFQ9UHQ1 456 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 ZNF346Q9UL40 294 aaKnown RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 DIMT1Q9UNQ2 313 aaKnown RBP2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 FAM205AQ6ZU69 1335 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 SYNJ2O15056 1496 aa2.13□□□□□ -2.07
RNU6-48P-201ENST00000384161 PTPRUQ92729 1446 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 IGHV3OR16-12A0A075B7B8 117 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 A0A0A6YYD4 124 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 SH3PXD2BA1X283 911 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 C5orf51A6NDU8 294 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 PHOX2AO14813 284 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 KINO60870 393 aaKnown RBP2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 HSF2BPO75031 334 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 PRAMEF12O95522 483 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 IGKV3-15P01624 115 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 P4HA1P13674 534 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 UGT1A6P19224 532 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 HLA-DPA1P20036 260 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 NUMBP49757 651 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 CASP9P55211 416 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 PPP1R8Q12972 351 aaKnown RBP2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 KLF5Q13887 457 aaPredicted RBP2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 CRMP1Q14194 572 aa2.12□□□□□ -2.07
RNU6-48P-201ENST00000384161 ABRAXAS2Q15018 415 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms