RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 NBL1P41271 181 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 CCR2P41597 374 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 GPR1P46091 355 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 RPS5P46782 204 aaKnown RBP9.53□□□□□ -0.88
USP11-203ENST00000377080 CCR8P51685 355 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 MAPK12P53778 367 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 MANFP55145 182 aaKnown RBP9.53□□□□□ -0.88
USP11-203ENST00000377080 LIM2P55344 173 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 REEP5Q00765 189 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 MC1RQ01726 317 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 AGERQ15109 404 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 MED22Q15528 200 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 TEAD2Q15562 447 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 SSX1Q16384 188 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 TSTQ16762 297 aaKnown RBP9.53□□□□□ -0.88
USP11-203ENST00000377080 PRSS53Q2L4Q9 553 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 C3orf38Q5JPI3 329 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 ZNF648Q5T619 568 aaPredicted RBP9.53□□□□□ -0.88
USP11-203ENST00000377080 C1orf94Q6P1W5 598 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 METAP1DQ6UB28 335 aaPredicted RBP9.53□□□□□ -0.88
USP11-203ENST00000377080 FAM83HQ6ZRV2 1179 aaPredicted RBP9.53□□□□□ -0.88
USP11-203ENST00000377080 ERN2Q76MJ5 926 aaKnown RBP9.53□□□□□ -0.88
USP11-203ENST00000377080 C17orf64Q86WR6 236 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 NUDT13Q86X67 352 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 UBQLNLQ8IYU4 475 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 MRPL43Q8N983 215 aaKnown RBP9.53□□□□□ -0.88
USP11-203ENST00000377080 TOR1AIP2Q8NFQ8 470 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 VN1R2Q8NFZ6 395 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 OR9Q2Q8NGE9 314 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 WDR36Q8NI36 951 aaKnown RBP9.53□□□□□ -0.88
USP11-203ENST00000377080 BBS10Q8TAM1 723 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 SFXN5Q8TD22 340 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 OR8D1Q8WZ84 308 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 SMPDL3AQ92484 453 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 FGF11Q92914 225 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 RGMAQ96B86 450 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 COX14Q96I36 57 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 MSLNLQ96KJ4 702 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 CEP19Q96LK0 163 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 OPALINQ96PE5 141 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 SNX18Q96RF0 628 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 ASPNQ9BXN1 380 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 POLR2J3Q9H1A7 115 aaKnown RBP9.53□□□□□ -0.88
USP11-203ENST00000377080 LINC00597Q9H2U6 94 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 HHATLQ9HCP6 504 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 AMBNQ9NP70 447 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 QPCTLQ9NXS2 382 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 TESQ9UGI8 421 aaKnown RBP9.53□□□□□ -0.88
USP11-203ENST00000377080 KLF15Q9UIH9 416 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 HCN2Q9UL51 889 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 SSR3Q9UNL2 185 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 RWDD3Q9Y3V2 267 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 CACNA1GO43497 2377 aa9.53□□□□□ -0.88
USP11-203ENST00000377080 A0A0G2JPF8 293 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 LOC100506127A0A0U1RQW1 187 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 TMEM129A0AVI4 362 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 KRT87PA6NCN2 255 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 HNRNPCL2B2RXH8 293 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 HNRNPCL3B7ZW38 293 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 SYT5O00445 386 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 PLPP1O14494 284 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 SPINT1O43278 529 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
USP11-203ENST00000377080 ENTPD6O75354 484 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 DLGAP3O95886 979 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 ADH1CP00326 375 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 HNRNPCL4P0DMR1 293 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 GJA1P17302 382 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 ALOX12P18054 663 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 PPP2R1BP30154 601 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 FGF9P31371 208 aaPredicted RBP9.52□□□□□ -0.89
USP11-203ENST00000377080 CRYBB2P43320 205 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 TSFMP43897 325 aaKnown RBP9.52□□□□□ -0.89
USP11-203ENST00000377080 GIPRP48546 466 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 CCT3P49368 545 aaKnown RBP9.52□□□□□ -0.89
USP11-203ENST00000377080 PCYT1AP49585 367 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 XKP51811 444 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 NUDT6P53370 316 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 NUBP1P53384 320 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 CDK5Q00535 292 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 RUNX1T1Q06455 604 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 HYAL1Q12794 435 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 RAB40BQ12829 278 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 SLC13A2Q13183 592 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 TPBGQ13641 420 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 ELAVL3Q14576 367 aaKnown RBP9.52□□□□□ -0.89
USP11-203ENST00000377080 DHCR24Q15392 516 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 MAPK11Q15759 364 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 HNRNPA1L2Q32P51 320 aaKnown RBP9.52□□□□□ -0.89
USP11-203ENST00000377080 LRRC73Q5JTD7 316 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 METRNLQ641Q3 311 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 PGBD2Q6P3X8 592 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 TMC5Q6UXY8 1006 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 C11orf96Q7Z7L8 435 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 DSG4Q86SJ6 1040 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 HEATR4Q86WZ0 1026 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 ZNF547Q8IVP9 402 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 RAB42Q8N4Z0 105 aa9.52□□□□□ -0.89
USP11-203ENST00000377080 LILRA3Q8N6C8 439 aaPredicted RBP9.52□□□□□ -0.89
USP11-203ENST00000377080 CELF5Q8N6W0 485 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms