RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 GSTA4O15217 222 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 FGF5P12034 268 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 CCL4P13236 92 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 FBLP22087 321 aaKnown RBP17.44■□□□□ 0.38
CLN3-206ENST00000360019 PPP2R1BP30154 601 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 INSM1Q01101 510 aaPredicted RBP17.44■□□□□ 0.38
CLN3-206ENST00000360019 ARHGAP40Q5TG30 622 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 NSMCE2Q96MF7 247 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 CTRCQ99895 268 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 YIPF2Q9BWQ6 316 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 SLC7A5P2Q9GIP4 190 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 IRF2BPLQ9H1B7 796 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 TOR4AQ9NXH8 423 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 TRPC4Q9UBN4 977 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 RIF1Q5UIP0 2472 aaKnown RBP17.44■□□□□ 0.38
CLN3-206ENST00000360019 UPK1AO00322 258 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 PLOD2O00469 737 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 CLDN4O14493 209 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 SLC35E2P0CK97 266 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 BMP2P12643 396 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 MAOAP21397 527 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 POLE2P56282 527 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 CLDN6P56747 220 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 IGLV3-21P80748 117 aaPredicted RBP17.44■□□□□ 0.38
CLN3-206ENST00000360019 ILKQ13418 452 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 TNFAIP8L2Q6P589 184 aaPredicted RBP17.44■□□□□ 0.38
CLN3-206ENST00000360019 ERICH5Q6P6B1 374 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 FAM111BQ6SJ93 734 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 DGAT2L6Q6ZPD8 337 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 MED25Q71SY5 747 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 COX15Q7KZN9 410 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 PIP4P1Q86T03 277 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 HORMAD2Q8N7B1 307 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 SIMC1Q8NDZ2 872 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 NETO1Q8TDF5 533 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 PPWD1Q96BP3 646 aaKnown RBP17.44■□□□□ 0.38
CLN3-206ENST00000360019 MOAP1Q96BY2 351 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 OR1F2PQ96R84 312 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 SLC22A11Q9NSA0 550 aa17.44■□□□□ 0.38
CLN3-206ENST00000360019 FAF1Q9UNN5 650 aaPredicted RBP17.44■□□□□ 0.38
CLN3-206ENST00000360019 EMC8O43402 210 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 PRKAG1P54619 331 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 HSD17B7P56937 341 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 AP2B1P63010 937 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 PRR5P85299 388 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 MGAT2Q10469 447 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 IL11RAQ14626 422 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 SNCBQ16143 134 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 PRICKLE4Q2TBC4 344 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 GCNT6Q5T4J0 391 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 STPG1Q5TH74 334 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 CEACAM20Q6UY09 585 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 RNF111Q6ZNA4 994 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 BPHLQ86WA6 291 aaPredicted RBP17.43■□□□□ 0.38
CLN3-206ENST00000360019 OR56A1Q8NGH5 318 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 DOK4Q8TEW6 326 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 SLCO4A1Q96BD0 722 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 SLC35G5Q96KT7 338 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 NTMQ9P121 344 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 KIF26BQ2KJY2 2108 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 PCNX2A6NKB5 2137 aa17.43■□□□□ 0.38
CLN3-206ENST00000360019 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 POLR1CO15160 346 aaPredicted RBP17.42■□□□□ 0.38
CLN3-206ENST00000360019 CREG1O75629 220 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 BMP10O95393 424 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 HMGN2P05204 90 aaKnown RBP17.42■□□□□ 0.38
CLN3-206ENST00000360019 CT62P0C5K7 136 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 NT5EP21589 574 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 DSTNP60981 165 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 E2F1Q01094 437 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 MC2RQ01718 297 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 STX4Q12846 297 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 VEZF1Q14119 521 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 TRMT12Q53H54 448 aaKnown RBP17.42■□□□□ 0.38
CLN3-206ENST00000360019 VWA2Q5GFL6 755 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 FHL5Q5TD97 284 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 ZC3H7AQ8IWR0 971 aaKnown RBP17.42■□□□□ 0.38
CLN3-206ENST00000360019 OR2L13Q8N349 312 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 NUP43Q8NFH3 380 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 CANT1Q8WVQ1 401 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 NCLNQ969V3 563 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 GIMAP5Q96F15 307 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 DUS3LQ96G46 650 aaKnown RBP17.42■□□□□ 0.38
CLN3-206ENST00000360019 ALOXE3Q9BYJ1 711 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 ASPSCR1Q9BZE9 553 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 TMEM38AQ9H6F2 299 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 C3orf14Q9HBI5 128 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 NECTIN3Q9NQS3 549 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 DDX18Q9NVP1 670 aaKnown RBP17.42■□□□□ 0.38
CLN3-206ENST00000360019 MAT2BQ9NZL9 334 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 STX18Q9P2W9 335 aaKnown RBP17.42■□□□□ 0.38
CLN3-206ENST00000360019 DHRS12A0PJE2 317 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 HMGN4O00479 90 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 NME6O75414 186 aaPredicted RBP17.42■□□□□ 0.38
CLN3-206ENST00000360019 GMNNO75496 209 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 PCGF2P35227 344 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 EFNA3P52797 238 aa17.42■□□□□ 0.38
CLN3-206ENST00000360019 EEF1A2Q05639 463 aaKnown RBP17.42■□□□□ 0.38
CLN3-206ENST00000360019 LASP1Q14847 261 aaKnown RBP17.42■□□□□ 0.38
CLN3-206ENST00000360019 ZNF385CQ66K41 422 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms