RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 RAB28P51157 221 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 GK2Q14410 553 aaPredicted RBP15.73■□□□□ 0.11
PTCH1-201ENST00000331920 EOGTQ5NDL2 527 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 FCRLBQ6BAA4 426 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 ZNF767PQ75MW2 155 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 OR2T27Q8NH04 317 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 ZNF559Q9BR84 538 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 G6PC3Q9BUM1 346 aa15.73■□□□□ 0.11
PTCH1-201ENST00000331920 BTNL10A8MVZ5 291 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 DRD5P21918 477 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 GABRA2P47869 451 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 GRB2P62993 217 aaKnown RBP15.72■□□□□ 0.11
PTCH1-201ENST00000331920 LCN10Q6JVE6 187 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 INTS5Q6P9B9 1019 aaKnown RBP15.72■□□□□ 0.11
PTCH1-201ENST00000331920 OR52E2Q8NGJ4 325 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 KCNA7Q96RP8 456 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 CGREF1Q99674 301 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 SYT3Q9BQG1 590 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 RNF32Q9H0A6 362 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 UNC119BA6NIH7 251 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 TP53I11O14683 189 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 RAD1O60671 282 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 SYN1P17600 705 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 CLCN2P51788 898 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 NLRP8Q86W28 1048 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 ZNF679Q8IYX0 411 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 FAM83FQ8NEG4 500 aaPredicted RBP15.72■□□□□ 0.11
PTCH1-201ENST00000331920 BBS10Q8TAM1 723 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 ZNF514Q96K75 400 aaPredicted RBP15.72■□□□□ 0.11
PTCH1-201ENST00000331920 ARMC1Q9NVT9 282 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 NME7Q9Y5B8 376 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 A0A1W2PPV4 95 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 TSPAN6O43657 245 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 POP7O75817 140 aaKnown RBP15.72■□□□□ 0.11
PTCH1-201ENST00000331920 SCO1O75880 301 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 CRHBPP24387 322 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 C6orf141Q5SZD1 244 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 MBLAC2Q68D91 279 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 FAM198BQ6UWH4 519 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 ZSWIM9Q86XI8 627 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 SMIM28A0A1B0GU29 152 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 LRCH4O75427 683 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 CD9P21926 228 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 FADDQ13158 208 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 KHDC1LQ5JSQ8 128 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 OR2AP1Q8NGE2 309 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 KCTD13Q8WZ19 329 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 HDHD5Q9BXW7 423 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 JCADQ9P266 1359 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 C17orf113A0A1B0GUU1 675 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 FSCN2O14926 492 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 ARPC5O15511 151 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 PRPH2P23942 346 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 GPM6BQ13491 265 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 ACSBG2Q5FVE4 666 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 HES5Q5TA89 166 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 LCLAT1Q6UWP7 414 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 NPAS4Q8IUM7 802 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 FAM217AQ8IXS0 508 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 OR4F6Q8NGB9 312 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 OR4K14Q8NGD5 310 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 NUPL2O15504 423 aaKnown RBP15.72■□□□□ 0.11
PTCH1-201ENST00000331920 HOXD8P13378 290 aaPredicted RBP15.72■□□□□ 0.11
PTCH1-201ENST00000331920 TRAM1Q15629 374 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 STEAP4Q687X5 459 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 TMIGD1Q6UXZ0 262 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 NELL2Q99435 816 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 BTBD2Q9BX70 525 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 CNTNAP4Q9C0A0 1308 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 CHRNB2P17787 502 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 FCER1GP30273 86 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 PLCXD2Q0VAA5 305 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 TRMT10BQ6PF06 316 aaKnown RBP15.72■□□□□ 0.11
PTCH1-201ENST00000331920 VHLLQ6RSH7 139 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 TSPAN33Q86UF1 283 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 TICAM1Q8IUC6 712 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 ASCC1Q8N9N2 400 aaKnown RBP15.72■□□□□ 0.11
PTCH1-201ENST00000331920 SLC35F5Q8WV83 523 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 ARL11Q969Q4 196 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 ASB9Q96DX5 294 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 FAM86C1Q9NVL1 165 aa15.72■□□□□ 0.11
PTCH1-201ENST00000331920 MYH1P12882 1939 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 MYH2Q9UKX2 1941 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 MYH4Q9Y623 1939 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 HSPB6O14558 160 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 MAP2K3P46734 347 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 AGAP7PQ5VUJ5 663 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 AGAP6Q5VW22 663 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 LANCL3Q6ZV70 420 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 KCTD20Q7Z5Y7 419 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 GAB3Q8WWW8 586 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 AGAP4Q96P64 663 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 SMG9Q9H0W8 520 aaKnown RBP15.71■□□□□ 0.11
PTCH1-201ENST00000331920 OXSMQ9NWU1 459 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 HRASLS2Q9NWW9 162 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 RABL2BQ9UNT1 228 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 ATG4BQ9Y4P1 393 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 MYBPHLA2RUH7 354 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 E7ESA3 106 aa15.71■□□□□ 0.11
PTCH1-201ENST00000331920 MAOAP21397 527 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms