RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 CDH10Q9Y6N8 788 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 KIDINS220Q9ULH0 1771 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 DNM1LO00429 736 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 GRB7Q14451 532 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 RAB30Q15771 203 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 ZNF517Q6ZMY9 492 aaPredicted RBP11.57□□□□□ -0.56
PCF11-201ENST00000298281 FAM43BQ6ZT52 329 aaPredicted RBP11.57□□□□□ -0.56
PCF11-201ENST00000298281 OR4K15Q8NH41 348 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 HAS2Q92819 552 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 HSPBAP1Q96EW2 488 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 DMAC2Q9NW81 257 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 RIPK3Q9Y572 518 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 IRS2Q9Y4H2 1338 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 A0A0G2JLL6 359 aaPredicted RBP11.57□□□□□ -0.56
PCF11-201ENST00000298281 GJE1A6NN92 205 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 TSPAN6O43657 245 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 HTR2AP28223 471 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 AQP4P55087 323 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 HES1Q14469 280 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 LTC4SQ16873 150 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 TMEM201Q5SNT2 666 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 TPRG1Q6ZUI0 275 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 PRRT2Q7Z6L0 340 aaPredicted RBP11.57□□□□□ -0.56
PCF11-201ENST00000298281 DCUN1D3Q8IWE4 304 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 HERC2P3Q9BVR0 1158 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 POLDIP3Q9BY77 421 aaKnown RBP11.57□□□□□ -0.56
PCF11-201ENST00000298281 TRBC2A0A5B9 178 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 EDN3P14138 238 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 SYN1P17600 705 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 ERP29P30040 261 aaKnown RBP11.57□□□□□ -0.56
PCF11-201ENST00000298281 TRAM1Q15629 374 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 KHDC1Q4VXA5 237 aaKnown RBP11.57□□□□□ -0.56
PCF11-201ENST00000298281 TPRG1LQ5T0D9 272 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 CST9LP1Q5W188 147 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 TMIGD1Q6UXZ0 262 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 SLC35F5Q8WV83 523 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 ITPAQ9BY32 194 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 PLAGL1Q9UM63 463 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 INHAP05111 366 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 ZBED5Q49AG3 693 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 BCL2L15Q5TBC7 163 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 CEACAM20Q6UY09 585 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 C12orf42Q96LP6 360 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 DPCDQ9BVM2 203 aaPredicted RBP11.57□□□□□ -0.56
PCF11-201ENST00000298281 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 RABL2AQ9UBK7 228 aaPredicted RBP11.57□□□□□ -0.56
PCF11-201ENST00000298281 ACSL5Q9ULC5 683 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 RABL2BQ9UNT1 228 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 SCML2Q9UQR0 700 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 ECI2O75521 394 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 HOXB2P14652 356 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 SF3A2Q15428 464 aaKnown RBP11.57□□□□□ -0.56
PCF11-201ENST00000298281 FAM214AQ32MH5 1076 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 TIGD5Q53EQ6 642 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 PIGWQ7Z7B1 504 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 OR9A4Q8NGU2 314 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 TFGQ92734 400 aaPredicted RBP11.57□□□□□ -0.56
PCF11-201ENST00000298281 ZNF358Q9NW07 568 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 UBQLN2Q9UHD9 624 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 LRRC42Q9Y546 428 aa11.57□□□□□ -0.56
PCF11-201ENST00000298281 A0A1W2PPK0 400 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 C8orf89P0DMQ9 161 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 ACRP10323 421 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 LMO2P25791 158 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 PREPP48147 710 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 MLLT10P55197 1068 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 HSD17B7P56937 341 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 ZNF45Q02386 682 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 GLT8D1Q68CQ7 371 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 IL20RBQ6UXL0 311 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 SLC51AQ86UW1 340 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 RBMXL3Q8N7X1 1067 aaKnown RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 ZNF675Q8TD23 568 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 DCSTAMPQ9H295 470 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 FAM230AA0A1W2PPH8 454 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 A0A1W2PRU2 124 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 CRXO43186 299 aaPredicted RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 NIPSNAP2O75323 286 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 EBLN1P0CF75 366 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 KITLGP21583 273 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 ART1P52961 327 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 ID2Q02363 134 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 RNF151Q2KHN1 245 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 CNKSR3Q6P9H4 555 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 PRSS55Q6UWB4 352 aaPredicted RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 OR4N5Q8IXE1 308 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 PTBP2Q9UKA9 531 aaKnown RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 ATG2BQ96BY7 2078 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 UNCXA6NJT0 531 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 ANKRD66B4E2M5 251 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 OXSR1O95747 527 aaPredicted RBP11.56□□□□□ -0.56
PCF11-201ENST00000298281 PIGRP01833 764 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 FPR1P21462 350 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 EDNRBP24530 442 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 HRH2P25021 359 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 SLC18A2Q05940 514 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 CLEC20AQ6ZU45 233 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 IGFN1Q86VF2 1251 aa11.56□□□□□ -0.56
PCF11-201ENST00000298281 ZFP82Q8N141 532 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms