RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 BARD1Q99728 777 aaKnown RBP21.32■■□□□ 1
CDX1-201ENST00000231656 GLIPR2Q9H4G4 154 aa21.32■■□□□ 1
CDX1-201ENST00000231656 KLHL3Q9UH77 587 aa21.32■■□□□ 1
CDX1-201ENST00000231656 BAG5Q9UL15 447 aa21.32■■□□□ 1
CDX1-201ENST00000231656 PADI2Q9Y2J8 665 aa21.32■■□□□ 1
CDX1-201ENST00000231656 PCDHGB2Q9Y5G2 931 aa21.32■■□□□ 1
CDX1-201ENST00000231656 ASCC3Q8N3C0 2202 aaKnown RBP21.32■■□□□ 1
CDX1-201ENST00000231656 OTOGLQ3ZCN5 2332 aa21.31■■□□□ 1
CDX1-201ENST00000231656 WASHC1A8K0Z3 465 aa21.31■■□□□ 1
CDX1-201ENST00000231656 H0YGG7 62 aa21.31■■□□□ 1
CDX1-201ENST00000231656 GUCY1B2O75343 617 aa21.31■■□□□ 1
CDX1-201ENST00000231656 C9P02748 559 aa21.31■■□□□ 1
CDX1-201ENST00000231656 SLC35G6P0C7Q6 338 aa21.31■■□□□ 1
CDX1-201ENST00000231656 CKMT1AP12532 417 aa21.31■■□□□ 1
CDX1-201ENST00000231656 DNAJA1P31689 397 aaKnown RBP21.31■■□□□ 1
CDX1-201ENST00000231656 ARF3P61204 181 aaPredicted RBP21.31■■□□□ 1
CDX1-201ENST00000231656 WDR74Q6RFH5 385 aaPredicted RBP21.31■■□□□ 1
CDX1-201ENST00000231656 C6orf120Q7Z4R8 191 aa21.31■■□□□ 1
CDX1-201ENST00000231656 TSEN54Q7Z6J9 526 aaKnown RBP21.31■■□□□ 1
CDX1-201ENST00000231656 HORMAD2Q8N7B1 307 aa21.31■■□□□ 1
CDX1-201ENST00000231656 RERGQ96A58 199 aaPredicted RBP21.31■■□□□ 1
CDX1-201ENST00000231656 TCTN2Q96GX1 697 aa21.31■■□□□ 1
CDX1-201ENST00000231656 AMBRA1Q9C0C7 1298 aa21.31■■□□□ 1
CDX1-201ENST00000231656 A4GALTQ9NPC4 353 aa21.31■■□□□ 1
CDX1-201ENST00000231656 FAM118AQ9NWS6 357 aa21.31■■□□□ 1
CDX1-201ENST00000231656 TMEM9Q9P0T7 183 aa21.31■■□□□ 1
CDX1-201ENST00000231656 ANGPT4Q9Y264 503 aa21.31■■□□□ 1
CDX1-201ENST00000231656 MN1Q10571 1320 aaPredicted RBP21.31■■□□□ 1
CDX1-201ENST00000231656 P2RX6O15547 441 aa21.31■■□□□ 1
CDX1-201ENST00000231656 HCRTR1O43613 425 aa21.31■■□□□ 1
CDX1-201ENST00000231656 HS6ST1O60243 411 aa21.31■■□□□ 1
CDX1-201ENST00000231656 AIFM1O95831 613 aa21.31■■□□□ 1
CDX1-201ENST00000231656 OPN1SWP03999 348 aa21.31■■□□□ 1
CDX1-201ENST00000231656 FPR1P21462 350 aa21.31■■□□□ 1
CDX1-201ENST00000231656 GRK6P43250 576 aa21.31■■□□□ 1
CDX1-201ENST00000231656 RPS26P62854 115 aaKnown RBP21.31■■□□□ 1
CDX1-201ENST00000231656 RGS1Q08116 209 aa21.31■■□□□ 1
CDX1-201ENST00000231656 CEACAM20Q6UY09 585 aa21.31■■□□□ 1
CDX1-201ENST00000231656 KCT2Q8NC54 265 aa21.31■■□□□ 1
CDX1-201ENST00000231656 GAL3ST3Q96A11 431 aa21.31■■□□□ 1
CDX1-201ENST00000231656 NRBF2Q96F24 287 aa21.31■■□□□ 1
CDX1-201ENST00000231656 MUS81Q96NY9 551 aa21.31■■□□□ 1
CDX1-201ENST00000231656 CCDC3Q9BQI4 270 aa21.31■■□□□ 1
CDX1-201ENST00000231656 SMIM31A0A1B0GVY4 71 aa21.3■■□□□ 1
CDX1-201ENST00000231656 M0QX08 132 aa21.3■■□□□ 1
CDX1-201ENST00000231656 PGRMC2O15173 223 aa21.3■■□□□ 1
CDX1-201ENST00000231656 SEC24DO94855 1032 aaPredicted RBP21.3■■□□□ 1
CDX1-201ENST00000231656 DAB2P98082 770 aa21.3■■□□□ 1
CDX1-201ENST00000231656 TGM3Q08188 693 aa21.3■■□□□ 1
CDX1-201ENST00000231656 SPDYE7PQ495Y7 208 aa21.3■■□□□ 1
CDX1-201ENST00000231656 TTC23Q5W5X9 447 aa21.3■■□□□ 1
CDX1-201ENST00000231656 CAMKVQ8NCB2 501 aa21.3■■□□□ 1
CDX1-201ENST00000231656 GRIP2Q9C0E4 1043 aa21.3■■□□□ 1
CDX1-201ENST00000231656 FBXW2Q9UKT8 454 aa21.3■■□□□ 1
CDX1-201ENST00000231656 CES1P1Q9UKY3 287 aa21.3■■□□□ 1
CDX1-201ENST00000231656 GLOD5A6NK44 160 aa21.29■■□□□ 1
CDX1-201ENST00000231656 TRIM64CA6NLI5 447 aa21.29■■□□□ 1
CDX1-201ENST00000231656 MYO1GB0I1T2 1018 aa21.29■■□□□ 1
CDX1-201ENST00000231656 CDX4O14627 284 aaPredicted RBP21.29■■□□□ 1
CDX1-201ENST00000231656 ZBTB11O95625 1053 aaPredicted RBP21.29■■□□□ 1
CDX1-201ENST00000231656 SPTBP11277 2137 aa21.29■■□□□ 1
CDX1-201ENST00000231656 PIGAP37287 484 aa21.29■■□□□ 1
CDX1-201ENST00000231656 CCT3P49368 545 aaKnown RBP21.29■■□□□ 1
CDX1-201ENST00000231656 NR1H2P55055 460 aa21.29■■□□□ 1
CDX1-201ENST00000231656 TUBA4AP68366 448 aa21.29■■□□□ 1
CDX1-201ENST00000231656 SPEM2Q0P670 501 aa21.29■■□□□ 1
CDX1-201ENST00000231656 KCNAB2Q13303 367 aa21.29■■□□□ 1
CDX1-201ENST00000231656 SQSTM1Q13501 440 aa21.29■■□□□ 1
CDX1-201ENST00000231656 DEFB110Q30KQ9 67 aa21.29■■□□□ 1
CDX1-201ENST00000231656 NADK2Q4G0N4 442 aa21.29■■□□□ 1
CDX1-201ENST00000231656 IFI44LQ53G44 452 aa21.29■■□□□ 1
CDX1-201ENST00000231656 ZC3H12BQ5HYM0 836 aaKnown RBP21.29■■□□□ 1
CDX1-201ENST00000231656 C18orf63Q68DL7 685 aa21.29■■□□□ 1
CDX1-201ENST00000231656 TNFAIP8L2Q6P589 184 aaPredicted RBP21.29■■□□□ 1
CDX1-201ENST00000231656 PRR23CQ6ZRP0 262 aa21.29■■□□□ 1
CDX1-201ENST00000231656 DGLUCYQ7Z3D6 616 aa21.29■■□□□ 1
CDX1-201ENST00000231656 CARFQ8N187 725 aa21.29■■□□□ 1
CDX1-201ENST00000231656 DNAJC22Q8N4W6 341 aa21.29■■□□□ 1
CDX1-201ENST00000231656 NUDT22Q9BRQ3 303 aa21.29■■□□□ 1
CDX1-201ENST00000231656 SERHL2Q9H4I8 314 aa21.29■■□□□ 1
CDX1-201ENST00000231656 LYARQ9NX58 379 aaKnown RBP21.29■■□□□ 1
CDX1-201ENST00000231656 NDUFA13Q9P0J0 144 aa21.29■■□□□ 1
CDX1-201ENST00000231656 C3orf18Q9UK00 162 aa21.29■■□□□ 1
CDX1-201ENST00000231656 SCN3AQ9NY46 2000 aa21.29■■□□□ 1
CDX1-201ENST00000231656 PROM1O43490 865 aa21.28■■□□□ 1
CDX1-201ENST00000231656 EIF2S1P05198 315 aaKnown RBP21.28■■□□□ 1
CDX1-201ENST00000231656 NTSP30990 170 aa21.28■■□□□ 1
CDX1-201ENST00000231656 DUSP3P51452 185 aaPredicted RBP21.28■■□□□ 1
CDX1-201ENST00000231656 VSX2P58304 361 aaPredicted RBP21.28■■□□□ 1
CDX1-201ENST00000231656 LAPTM4AQ15012 233 aa21.28■■□□□ 1
CDX1-201ENST00000231656 RFX4Q33E94 735 aa21.28■■□□□ 1
CDX1-201ENST00000231656 INAVAQ3KP66 663 aa21.28■■□□□ 1
CDX1-201ENST00000231656 REEP3Q6NUK4 255 aa21.28■■□□□ 1
CDX1-201ENST00000231656 SLC48A1Q6P1K1 146 aa21.28■■□□□ 1
CDX1-201ENST00000231656 CYP4Z1Q86W10 505 aa21.28■■□□□ 1
CDX1-201ENST00000231656 IFI44Q8TCB0 444 aa21.28■■□□□ 1
CDX1-201ENST00000231656 UTP15Q8TED0 518 aaKnown RBP21.28■■□□□ 1
CDX1-201ENST00000231656 YIPF3Q9GZM5 350 aa21.28■■□□□ 1
CDX1-201ENST00000231656 CHRNA10Q9GZZ6 450 aa21.28■■□□□ 1
CDX1-201ENST00000231656 REEP1Q9H902 201 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms