RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	PNT1	P38969	423 aa		5.09	□□□□□ -1.59
RKM3	YBR030W	CAF16	P43569	289 aa		5.09	□□□□□ -1.59
RKM3	YBR030W	ESF2	P53743	316 aa	Known RBP	5.09	□□□□□ -1.59
RKM3	YBR030W	MLC2	Q06580	163 aa		5.09	□□□□□ -1.59
RKM3	YBR030W	GUD1	Q07729	489 aa		5.09	□□□□□ -1.59
RKM3	YBR030W	AI1	P03875	834 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	DAL3	P32459	195 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	ATG14	P38270	344 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	RIM4	P38741	713 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	GPP2	P40106	250 aa	Known RBP	5.08	□□□□□ -1.6
RKM3	YBR030W	TOK1	P40310	691 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	GZF3	P42944	551 aa	Known RBP	5.08	□□□□□ -1.6
RKM3	YBR030W	SPO74	P45819	413 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	SNP1	Q00916	300 aa	Predicted RBP	5.08	□□□□□ -1.6
RKM3	YBR030W	ADE8	P04161	214 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	YER152C	P10356	443 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	DBP2	P24783	546 aa	Known RBP	5.08	□□□□□ -1.6
RKM3	YBR030W	KCC4	P25389	1037 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	SSH4	P32343	579 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	STO1	P34160	861 aa	Known RBP	5.08	□□□□□ -1.6
RKM3	YBR030W	NEO1	P40527	1151 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	YGR283C	P53336	341 aa	Predicted RBP	5.08	□□□□□ -1.6
RKM3	YBR030W	COG8	Q04632	607 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	TDA6	Q06466	467 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	RSC3	Q06639	885 aa		5.08	□□□□□ -1.6
RKM3	YBR030W	RPL11A	P0C0W9	174 aa	Known RBP	5.07	□□□□□ -1.6
RKM3	YBR030W	HMG1	P12683	1054 aa		5.07	□□□□□ -1.6
RKM3	YBR030W	CDC12	P32468	407 aa	Known RBP	5.07	□□□□□ -1.6
RKM3	YBR030W	MCD4	P36051	919 aa		5.07	□□□□□ -1.6
RKM3	YBR030W	YKL133C	P36066	463 aa		5.07	□□□□□ -1.6
RKM3	YBR030W	YBR238C	P38330	731 aa	Known RBP	5.07	□□□□□ -1.6
RKM3	YBR030W	YHL041W	P38730	149 aa		5.07	□□□□□ -1.6
RKM3	YBR030W	PHM6	Q05637	104 aa		5.07	□□□□□ -1.6
RKM3	YBR030W	ATG33	Q06485	197 aa		5.07	□□□□□ -1.6
RKM3	YBR030W	RRI2	Q12348	645 aa		5.07	□□□□□ -1.6
RKM3	YBR030W	RPL11B	Q3E757	174 aa	Predicted RBP	5.07	□□□□□ -1.6
RKM3	YBR030W	NPP1	P25353	742 aa		5.06	□□□□□ -1.6
RKM3	YBR030W	KTR4	P38131	464 aa		5.06	□□□□□ -1.6
RKM3	YBR030W	ICP55	P40051	511 aa		5.06	□□□□□ -1.6
RKM3	YBR030W	MNN11	P46985	422 aa	Known RBP	5.06	□□□□□ -1.6
RKM3	YBR030W	AIM14	P53109	570 aa		5.06	□□□□□ -1.6
RKM3	YBR030W	GUP1	P53154	560 aa		5.06	□□□□□ -1.6
RKM3	YBR030W	MEC3	Q02574	474 aa		5.06	□□□□□ -1.6
RKM3	YBR030W	ATP25	Q03153	612 aa		5.06	□□□□□ -1.6
RKM3	YBR030W	PSR2	Q07949	397 aa		5.06	□□□□□ -1.6
RKM3	YBR030W	DBF20	P32328	564 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	KNS1	P32350	737 aa	Predicted RBP	5.05	□□□□□ -1.6
RKM3	YBR030W	HOG1	P32485	435 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	REC104	P33323	182 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	EMC3	P36039	253 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	HOS4	P40480	1083 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	GCV1	P48015	400 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	MDM1	Q01846	1127 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	YML131W	Q03102	365 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	RMP1	Q12530	201 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	HEM12	P32347	362 aa	Predicted RBP	5.05	□□□□□ -1.6
RKM3	YBR030W	REI1	P38344	393 aa	Predicted RBP	5.05	□□□□□ -1.6
RKM3	YBR030W	BIT2	P38346	545 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	YAR028W	P39548	234 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	MXR1	P40029	184 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	HIS6	P40545	261 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	SOK2	P53438	785 aa	Predicted RBP	5.05	□□□□□ -1.6
RKM3	YBR030W	SRP1	Q02821	542 aa	Known RBP	5.05	□□□□□ -1.6
RKM3	YBR030W	YDR338C	Q05497	695 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	MET7	Q08645	548 aa		5.05	□□□□□ -1.6
RKM3	YBR030W	NFU1	P32860	256 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	YAP1801	P38856	637 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	RPT2	P40327	437 aa	Known RBP	5.04	□□□□□ -1.6
RKM3	YBR030W	SAP185	P40856	1058 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	IES1	P43579	692 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	VPS53	P47061	822 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	DAM1	P53267	343 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	PAP2	P53632	584 aa	Known RBP	5.04	□□□□□ -1.6
RKM3	YBR030W	GUP2	Q08929	609 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	YPL260W	Q08977	551 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	LAP2	Q10740	671 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	ENV7	Q12003	364 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	PHM7	Q12252	991 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	ERP4	Q12450	207 aa		5.04	□□□□□ -1.6
RKM3	YBR030W	YCK2	P23292	546 aa	Known RBP	5.03	□□□□□ -1.6
RKM3	YBR030W	NFS1	P25374	497 aa		5.03	□□□□□ -1.6
RKM3	YBR030W	PER1	P25625	357 aa		5.03	□□□□□ -1.6
RKM3	YBR030W	YKL151C	P36059	337 aa		5.03	□□□□□ -1.6
RKM3	YBR030W	LEM3	P42838	414 aa		5.03	□□□□□ -1.6
RKM3	YBR030W	CCM1	P48237	864 aa	Predicted RBP	5.03	□□□□□ -1.6
RKM3	YBR030W	YGR153W	P48238	217 aa		5.03	□□□□□ -1.6
RKM3	YBR030W	ECM9	Q02202	377 aa		5.03	□□□□□ -1.6
RKM3	YBR030W	HRQ1	Q05549	1077 aa		5.03	□□□□□ -1.6
RKM3	YBR030W	SPO21	Q12411	609 aa		5.03	□□□□□ -1.6
RKM3	YBR030W	MSS18	P08593	268 aa		5.02	□□□□□ -1.61
RKM3	YBR030W	HSC82	P15108	705 aa	Known RBP	5.02	□□□□□ -1.61
RKM3	YBR030W	DID4	P36108	232 aa		5.02	□□□□□ -1.61
RKM3	YBR030W	CCT5	P40413	562 aa	Known RBP	5.02	□□□□□ -1.61
RKM3	YBR030W	TAF1	P46677	1066 aa		5.02	□□□□□ -1.61
RKM3	YBR030W	UBA2	P52488	636 aa		5.02	□□□□□ -1.61
RKM3	YBR030W	TAN1	P53072	289 aa	Predicted RBP	5.02	□□□□□ -1.61
RKM3	YBR030W	YNR014W	P53719	212 aa		5.02	□□□□□ -1.61
RKM3	YBR030W	GIS4	Q04233	774 aa		5.02	□□□□□ -1.61
RKM3	YBR030W	ALG6	Q12001	544 aa	Known RBP	5.02	□□□□□ -1.61
RKM3	YBR030W	YOL087C	Q99247	1116 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 155.7 ms