RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 DBF4Q9UBU7 674 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-224ENST00000641711 NARFQ9UHQ1 456 aa12.99□□□□□ -0.33
PHGDH-224ENST00000641711 PSDA5PKW4 1024 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-224ENST00000641711 IPO8O15397 1037 aaKnown RBP12.98□□□□□ -0.33
PHGDH-224ENST00000641711 A1BGP04217 495 aa12.98□□□□□ -0.33
PHGDH-224ENST00000641711 MVPQ14764 893 aaKnown RBP12.98□□□□□ -0.33
PHGDH-224ENST00000641711 DZIP1LQ8IYY4 767 aaKnown RBP12.98□□□□□ -0.33
PHGDH-224ENST00000641711 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
PHGDH-224ENST00000641711 BCL2L13Q9BXK5 485 aa12.98□□□□□ -0.33
PHGDH-224ENST00000641711 BACH2Q9BYV9 841 aa12.98□□□□□ -0.33
PHGDH-224ENST00000641711 HYPKQ9NX55 129 aa12.98□□□□□ -0.33
PHGDH-224ENST00000641711 NUP98P52948 1817 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 ANKRD36CQ5JPF3 1778 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 NBPF26B4DH59 902 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 ZPR1O75312 459 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 PHF14O94880 888 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 PDE4AP27815 886 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 NBPF10Q6P3W6 841 aaKnown RBP12.97□□□□□ -0.33
PHGDH-224ENST00000641711 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 ATF7IPQ6VMQ6 1270 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 NLGN1Q8N2Q7 840 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 NBPF15Q8N660 670 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 C8orf58Q8NAV2 365 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 STK31Q9BXU1 1019 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 SPON1Q9HCB6 807 aa12.97□□□□□ -0.33
PHGDH-224ENST00000641711 ERVV-1B6SEH8 477 aa12.96□□□□□ -0.33
PHGDH-224ENST00000641711 VAMP4O75379 141 aa12.96□□□□□ -0.33
PHGDH-224ENST00000641711 TRIM27P14373 513 aa12.96□□□□□ -0.33
PHGDH-224ENST00000641711 EIF2S2P20042 333 aaKnown RBP12.96□□□□□ -0.33
PHGDH-224ENST00000641711 PDIA6Q15084 440 aa12.96□□□□□ -0.33
PHGDH-224ENST00000641711 LRP10Q7Z4F1 713 aa12.96□□□□□ -0.33
PHGDH-224ENST00000641711 AMIGO3Q86WK7 504 aa12.96□□□□□ -0.33
PHGDH-224ENST00000641711 ZNF652Q9Y2D9 606 aa12.96□□□□□ -0.33
PHGDH-224ENST00000641711 IGHDP01880 384 aa12.95□□□□□ -0.34
PHGDH-224ENST00000641711 DZIP3Q86Y13 1208 aaKnown RBP12.95□□□□□ -0.34
PHGDH-224ENST00000641711 TSPYL6Q8N831 410 aa12.95□□□□□ -0.34
PHGDH-224ENST00000641711 ARHGAP45Q92619 1136 aa12.95□□□□□ -0.34
PHGDH-224ENST00000641711 CHPF2Q9P2E5 772 aa12.95□□□□□ -0.34
PHGDH-224ENST00000641711 TNNQ9UQP3 1299 aa12.95□□□□□ -0.34
PHGDH-224ENST00000641711 NRXN2Q9P2S2 1712 aa12.95□□□□□ -0.34
PHGDH-224ENST00000641711 ATP10DQ9P241 1426 aa12.95□□□□□ -0.34
PHGDH-224ENST00000641711 ARFGEF2Q9Y6D5 1785 aa12.94□□□□□ -0.34
PHGDH-224ENST00000641711 MAP3K15Q6ZN16 1313 aa12.94□□□□□ -0.34
PHGDH-224ENST00000641711 CAMTA2O94983 1202 aa12.94□□□□□ -0.34
PHGDH-224ENST00000641711 GYS1P13807 737 aa12.94□□□□□ -0.34
PHGDH-224ENST00000641711 POLD1P28340 1107 aa12.94□□□□□ -0.34
PHGDH-224ENST00000641711 KIF6Q6ZMV9 814 aa12.94□□□□□ -0.34
PHGDH-224ENST00000641711 FTSJ3Q8IY81 847 aaKnown RBP12.94□□□□□ -0.34
PHGDH-224ENST00000641711 NOB1Q9ULX3 412 aaKnown RBP12.94□□□□□ -0.34
PHGDH-224ENST00000641711 DDX19BQ9UMR2 479 aa12.94□□□□□ -0.34
PHGDH-224ENST00000641711 KIF13BQ9NQT8 1826 aa12.93□□□□□ -0.34
PHGDH-224ENST00000641711 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
PHGDH-224ENST00000641711 ZNF330Q9Y3S2 320 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-224ENST00000641711 PCDHB15Q9Y5E8 787 aa12.93□□□□□ -0.34
PHGDH-224ENST00000641711 IBTKQ9P2D0 1353 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-224ENST00000641711 ELL2O00472 640 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-224ENST00000641711 DDX58O95786 925 aaKnown RBP12.92□□□□□ -0.34
PHGDH-224ENST00000641711 MYL6BP14649 208 aa12.92□□□□□ -0.34
PHGDH-224ENST00000641711 HSP90AB3PQ58FF7 597 aa12.92□□□□□ -0.34
PHGDH-224ENST00000641711 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
PHGDH-224ENST00000641711 SGIP1Q9BQI5 828 aa12.92□□□□□ -0.34
PHGDH-224ENST00000641711 RWDD1Q9H446 243 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-224ENST00000641711 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
PHGDH-224ENST00000641711 CARMIL3Q8ND23 1372 aa12.92□□□□□ -0.34
PHGDH-224ENST00000641711 ZBTB7AO95365 584 aa12.91□□□□□ -0.34
PHGDH-224ENST00000641711 ANP32AP39687 249 aaKnown RBP12.91□□□□□ -0.34
PHGDH-224ENST00000641711 PROSER3Q2NL68 480 aa12.91□□□□□ -0.34
PHGDH-224ENST00000641711 GIGYF2Q6Y7W6 1299 aaKnown RBP12.91□□□□□ -0.34
PHGDH-224ENST00000641711 PLBD2Q8NHP8 589 aa12.91□□□□□ -0.34
PHGDH-224ENST00000641711 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-224ENST00000641711 N4BP2Q86UW6 1770 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-224ENST00000641711 PTGER2P43116 358 aa12.9□□□□□ -0.34
PHGDH-224ENST00000641711 PIP4K2AP48426 406 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-224ENST00000641711 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-224ENST00000641711 XAGE3Q8WTP9 111 aa12.9□□□□□ -0.34
PHGDH-224ENST00000641711 CHMP4BQ9H444 224 aaKnown RBP12.9□□□□□ -0.34
PHGDH-224ENST00000641711 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
PHGDH-224ENST00000641711 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
PHGDH-224ENST00000641711 TBC1D2BQ9UPU7 963 aa12.9□□□□□ -0.34
PHGDH-224ENST00000641711 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
PHGDH-224ENST00000641711 PARP10Q53GL7 1025 aa12.89□□□□□ -0.35
PHGDH-224ENST00000641711 COPS6Q7L5N1 327 aa12.89□□□□□ -0.35
PHGDH-224ENST00000641711 SKAP1Q86WV1 359 aa12.89□□□□□ -0.35
PHGDH-224ENST00000641711 TMEM57Q8N5G2 664 aa12.89□□□□□ -0.35
PHGDH-224ENST00000641711 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
PHGDH-224ENST00000641711 ZBTB40Q9NUA8 1239 aa12.89□□□□□ -0.35
PHGDH-224ENST00000641711 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 ANXA1P04083 346 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 MMP10P09238 476 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 TM4SF1P30408 202 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 FLIIQ13045 1269 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 TTLL7Q6ZT98 887 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 PXDNLA1KZ92 1463 aa12.88□□□□□ -0.35
PHGDH-224ENST00000641711 ABCC4O15439 1325 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms