RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CCDC173Q0VFZ6 552 aa20.36■□□□□ 0.85
PHGDH-223ENST00000641597 CCDC8Q9H0W5 538 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-223ENST00000641597 HOXB7P09629 217 aa20.35■□□□□ 0.85
PHGDH-223ENST00000641597 KSR2Q6VAB6 950 aa20.35■□□□□ 0.85
PHGDH-223ENST00000641597 AACSQ86V21 672 aa20.35■□□□□ 0.85
PHGDH-223ENST00000641597 BICC1Q9H694 974 aaKnown RBP20.35■□□□□ 0.85
PHGDH-223ENST00000641597 CASTP20810 708 aaKnown RBP20.34■□□□□ 0.85
PHGDH-223ENST00000641597 TTC14Q96N46 770 aa20.34■□□□□ 0.85
PHGDH-223ENST00000641597 RPAP1Q9BWH6 1393 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-223ENST00000641597 PRPF40BQ6NWY9 871 aaKnown RBP20.34■□□□□ 0.85
PHGDH-223ENST00000641597 CLASRPQ8N2M8 674 aaKnown RBP20.34■□□□□ 0.85
PHGDH-223ENST00000641597 FAM227BQ96M60 508 aa20.34■□□□□ 0.85
PHGDH-223ENST00000641597 LMO7Q8WWI1 1683 aa20.33■□□□□ 0.85
PHGDH-223ENST00000641597 SASH1O94885 1247 aa20.33■□□□□ 0.85
PHGDH-223ENST00000641597 INTS4Q96HW7 963 aaKnown RBP20.33■□□□□ 0.85
PHGDH-223ENST00000641597 DIAPH3Q9NSV4 1193 aa20.33■□□□□ 0.85
PHGDH-223ENST00000641597 PDIA6Q15084 440 aa20.33■□□□□ 0.84
PHGDH-223ENST00000641597 USP48Q86UV5 1035 aa20.33■□□□□ 0.84
PHGDH-223ENST00000641597 EAF2Q96CJ1 260 aaPredicted RBP20.33■□□□□ 0.84
PHGDH-223ENST00000641597 RGPD5Q99666 1765 aa20.32■□□□□ 0.84
PHGDH-223ENST00000641597 IFIT2P09913 472 aaKnown RBP20.32■□□□□ 0.84
PHGDH-223ENST00000641597 AMOTQ4VCS5 1084 aa20.32■□□□□ 0.84
PHGDH-223ENST00000641597 KIAA1211Q6ZU35 1233 aa20.32■□□□□ 0.84
PHGDH-223ENST00000641597 CABLES1Q8TDN4 633 aa20.32■□□□□ 0.84
PHGDH-223ENST00000641597 CNPY2Q9Y2B0 182 aa20.32■□□□□ 0.84
PHGDH-223ENST00000641597 GLRX3O76003 335 aaKnown RBP20.31■□□□□ 0.84
PHGDH-223ENST00000641597 IGKV5-2P06315 115 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 EPHA10Q5JZY3 1008 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 KRT28Q7Z3Y7 464 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 EDC3Q96F86 508 aaKnown RBP20.31■□□□□ 0.84
PHGDH-223ENST00000641597 TCEANC2Q96MN5 208 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 ECHDC1Q9NTX5 307 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 TAF6LQ9Y6J9 622 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 NDUFB9Q9Y6M9 179 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 CHGBP05060 677 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 LRSAM1Q6UWE0 723 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 MPNDQ8N594 471 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 NFATC2IPQ8NCF5 419 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 IL17RAQ96F46 866 aa20.31■□□□□ 0.84
PHGDH-223ENST00000641597 GRM8O00222 908 aa20.3■□□□□ 0.84
PHGDH-223ENST00000641597 MTX1Q13505 466 aa20.3■□□□□ 0.84
PHGDH-223ENST00000641597 ANP32BQ92688 251 aaKnown RBP20.3■□□□□ 0.84
PHGDH-223ENST00000641597 JAKMIP1Q96N16 626 aaKnown RBP20.3■□□□□ 0.84
PHGDH-223ENST00000641597 NLRP2Q9NX02 1062 aa20.3■□□□□ 0.84
PHGDH-223ENST00000641597 CCDC83Q8IWF9 413 aa20.29■□□□□ 0.84
PHGDH-223ENST00000641597 BOLA2Q9H3K6 86 aa20.29■□□□□ 0.84
PHGDH-223ENST00000641597 HEG1Q9ULI3 1381 aa20.29■□□□□ 0.84
PHGDH-223ENST00000641597 NECAB1Q8N987 351 aa20.29■□□□□ 0.84
PHGDH-223ENST00000641597 SYT1P21579 422 aa20.28■□□□□ 0.84
PHGDH-223ENST00000641597 HSP90AB4PQ58FF6 505 aa20.28■□□□□ 0.84
PHGDH-223ENST00000641597 HYPKQ9NX55 129 aa20.28■□□□□ 0.84
PHGDH-223ENST00000641597 TTC41PQ6P2S7 1318 aa20.27■□□□□ 0.84
PHGDH-223ENST00000641597 ALDH1L1O75891 902 aa20.27■□□□□ 0.84
PHGDH-223ENST00000641597 ST3GAL1Q11201 340 aa20.27■□□□□ 0.84
PHGDH-223ENST00000641597 RIC3Q7Z5B4 369 aa20.27■□□□□ 0.84
PHGDH-223ENST00000641597 ERBB3P21860 1342 aa20.27■□□□□ 0.84
PHGDH-223ENST00000641597 USP42Q9H9J4 1324 aaKnown RBP20.27■□□□□ 0.84
PHGDH-223ENST00000641597 NMIQ13287 307 aaPredicted RBP20.27■□□□□ 0.83
PHGDH-223ENST00000641597 CHRNA2Q15822 529 aa20.27■□□□□ 0.83
PHGDH-223ENST00000641597 LINS1Q8NG48 757 aa20.27■□□□□ 0.83
PHGDH-223ENST00000641597 XAGE3Q8WTP9 111 aa20.27■□□□□ 0.83
PHGDH-223ENST00000641597 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.27■□□□□ 0.83
PHGDH-223ENST00000641597 LIMCH1Q9UPQ0 1083 aa20.27■□□□□ 0.83
PHGDH-223ENST00000641597 ZNF790Q6PG37 636 aa20.26■□□□□ 0.83
PHGDH-223ENST00000641597 COPS6Q7L5N1 327 aa20.26■□□□□ 0.83
PHGDH-223ENST00000641597 ZSCAN30Q86W11 494 aa20.26■□□□□ 0.83
PHGDH-223ENST00000641597 PROSER2Q86WR7 435 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-223ENST00000641597 USP16Q9Y5T5 823 aa20.26■□□□□ 0.83
PHGDH-223ENST00000641597 A0A0D9SFI3 127 aa20.26■□□□□ 0.83
PHGDH-223ENST00000641597 ZNF496Q96IT1 587 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-223ENST00000641597 DDX21Q9NR30 783 aaKnown RBP eCLIP20.26■□□□□ 0.83
PHGDH-223ENST00000641597 CCDC9Q9Y3X0 531 aaKnown RBP20.26■□□□□ 0.83
PHGDH-223ENST00000641597 WDR33Q9C0J8 1336 aaKnown RBP20.25■□□□□ 0.83
PHGDH-223ENST00000641597 FIBPO43427 364 aa20.25■□□□□ 0.83
PHGDH-223ENST00000641597 MYD88Q99836 296 aa20.25■□□□□ 0.83
PHGDH-223ENST00000641597 MBD3O95983 291 aa20.25■□□□□ 0.83
PHGDH-223ENST00000641597 PDLIM2Q96JY6 352 aa20.24■□□□□ 0.83
PHGDH-223ENST00000641597 KDM6AO15550 1401 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-223ENST00000641597 STX6O43752 255 aa20.24■□□□□ 0.83
PHGDH-223ENST00000641597 G3BP1Q13283 466 aaKnown RBP eCLIP20.24■□□□□ 0.839e-7■■■□□ 18.4
PHGDH-223ENST00000641597 PDRG1Q9NUG6 133 aa20.24■□□□□ 0.83
PHGDH-223ENST00000641597 RBM8AQ9Y5S9 174 aaKnown RBP20.24■□□□□ 0.83
PHGDH-223ENST00000641597 ZSCAN22P10073 491 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-223ENST00000641597 ME3Q16798 604 aa20.23■□□□□ 0.83
PHGDH-223ENST00000641597 SMC3Q9UQE7 1217 aa20.23■□□□□ 0.83
PHGDH-223ENST00000641597 CRYBG1Q9Y4K1 1723 aa20.23■□□□□ 0.83
PHGDH-223ENST00000641597 ATP5J2-PTCD1G3V325 749 aa20.23■□□□□ 0.83
PHGDH-223ENST00000641597 PTCD1O75127 700 aaKnown RBP20.23■□□□□ 0.83
PHGDH-223ENST00000641597 GJB2P29033 226 aa20.23■□□□□ 0.83
PHGDH-223ENST00000641597 NPHP4O75161 1426 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-223ENST00000641597 SLIT3O75094 1523 aa20.22■□□□□ 0.83
PHGDH-223ENST00000641597 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
PHGDH-223ENST00000641597 KCNJ4P48050 445 aa20.22■□□□□ 0.83
PHGDH-223ENST00000641597 NECTIN1Q15223 517 aa20.22■□□□□ 0.83
PHGDH-223ENST00000641597 ZNF589Q86UQ0 364 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-223ENST00000641597 RAPGEF4Q8WZA2 1011 aa20.22■□□□□ 0.83
PHGDH-223ENST00000641597 CCDC171Q6TFL3 1326 aa20.22■□□□□ 0.83
PHGDH-223ENST00000641597 NCAPD2Q15021 1401 aa20.22■□□□□ 0.83
PHGDH-223ENST00000641597 FAM173BQ6P4H8 233 aa20.22■□□□□ 0.83
PHGDH-223ENST00000641597 NPHP3Q7Z494 1330 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms