RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 NEK4P51957 841 aa20.79■□□□□ 0.92
PHGDH-211ENST00000641213 ERC1Q8IUD2 1116 aa20.79■□□□□ 0.92
PHGDH-211ENST00000641213 CLASRPQ8N2M8 674 aaKnown RBP20.79■□□□□ 0.92
PHGDH-211ENST00000641213 BICC1Q9H694 974 aaKnown RBP20.79■□□□□ 0.92
PHGDH-211ENST00000641213 BRPF3Q9ULD4 1205 aa20.79■□□□□ 0.92
PHGDH-211ENST00000641213 EPB41L2O43491 1005 aaKnown RBP20.79■□□□□ 0.92
PHGDH-211ENST00000641213 CLEC17AQ6ZS10 378 aa20.79■□□□□ 0.92
PHGDH-211ENST00000641213 LRP10Q7Z4F1 713 aa20.79■□□□□ 0.92
PHGDH-211ENST00000641213 CNTROBQ8N137 903 aa20.79■□□□□ 0.92
PHGDH-211ENST00000641213 IL17RAQ96F46 866 aa20.79■□□□□ 0.92
PHGDH-211ENST00000641213 FMNL2Q96PY5 1086 aa20.79■□□□□ 0.92
PHGDH-211ENST00000641213 GZF1Q9H116 711 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-211ENST00000641213 NEURL1BA8MQ27 555 aa20.78■□□□□ 0.92
PHGDH-211ENST00000641213 CABP4P57796 275 aa20.78■□□□□ 0.92
PHGDH-211ENST00000641213 NEXNQ0ZGT2 675 aa20.78■□□□□ 0.92
PHGDH-211ENST00000641213 METTL22Q9BUU2 404 aaPredicted RBP20.78■□□□□ 0.92
PHGDH-211ENST00000641213 CWC22Q9HCG8 908 aaKnown RBP20.77■□□□□ 0.92
PHGDH-211ENST00000641213 WDR17Q8IZU2 1322 aa20.77■□□□□ 0.92
PHGDH-211ENST00000641213 UBR2Q8IWV8 1755 aa20.77■□□□□ 0.92
PHGDH-211ENST00000641213 GLRX3O76003 335 aaKnown RBP20.77■□□□□ 0.92
PHGDH-211ENST00000641213 PRDM11Q9NQV5 511 aa20.77■□□□□ 0.92
PHGDH-211ENST00000641213 SOS2Q07890 1332 aaPredicted RBP20.77■□□□□ 0.91
PHGDH-211ENST00000641213 NUCB2P80303 420 aa20.76■□□□□ 0.91
PHGDH-211ENST00000641213 GCKRQ14397 625 aa20.76■□□□□ 0.91
PHGDH-211ENST00000641213 IL27Q8NEV9 243 aa20.76■□□□□ 0.91
PHGDH-211ENST00000641213 MYD88Q99836 296 aa20.76■□□□□ 0.91
PHGDH-211ENST00000641213 SGSM2O43147 1006 aa20.76■□□□□ 0.91
PHGDH-211ENST00000641213 ANKRD13DQ6ZTN6 518 aa20.76■□□□□ 0.91
PHGDH-211ENST00000641213 ZGPATQ8N5A5 531 aaKnown RBP20.76■□□□□ 0.91
PHGDH-211ENST00000641213 SLAIN2Q9P270 581 aa20.76■□□□□ 0.91
PHGDH-211ENST00000641213 SHANK3Q9BYB0 1731 aa20.76■□□□□ 0.91
PHGDH-211ENST00000641213 CYP2E1P05181 493 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-211ENST00000641213 PTMSP20962 102 aa20.75■□□□□ 0.91
PHGDH-211ENST00000641213 PIP4K2AP48426 406 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-211ENST00000641213 ECHDC1Q9NTX5 307 aa20.75■□□□□ 0.91
PHGDH-211ENST00000641213 COL5A2P05997 1499 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-211ENST00000641213 SASH1O94885 1247 aa20.74■□□□□ 0.91
PHGDH-211ENST00000641213 IFIT2P09913 472 aaKnown RBP20.74■□□□□ 0.91
PHGDH-211ENST00000641213 HSPA4P34932 840 aa20.74■□□□□ 0.91
PHGDH-211ENST00000641213 MCM2P49736 904 aa20.74■□□□□ 0.91
PHGDH-211ENST00000641213 L1TD1Q5T7N2 865 aaKnown RBP20.74■□□□□ 0.91
PHGDH-211ENST00000641213 TOM1L2Q6ZVM7 507 aa20.74■□□□□ 0.91
PHGDH-211ENST00000641213 FSD2A1L4K1 749 aa20.73■□□□□ 0.91
PHGDH-211ENST00000641213 BAG4O95429 457 aaKnown RBP20.73■□□□□ 0.91
PHGDH-211ENST00000641213 G3BP1Q13283 466 aaKnown RBP eCLIP20.73■□□□□ 0.919e-7■■■□□ 18.4
PHGDH-211ENST00000641213 GPATCH3Q96I76 525 aa20.73■□□□□ 0.91
PHGDH-211ENST00000641213 TMX3Q96JJ7 454 aa20.73■□□□□ 0.91
PHGDH-211ENST00000641213 PCDH11XQ9BZA7 1347 aa20.73■□□□□ 0.91
PHGDH-211ENST00000641213 PCDH11YQ9BZA8 1340 aa20.73■□□□□ 0.91
PHGDH-211ENST00000641213 PAPPAQ13219 1627 aa20.73■□□□□ 0.91
PHGDH-211ENST00000641213 SKOR2Q2VWA4 1001 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-211ENST00000641213 AACSQ86V21 672 aa20.73■□□□□ 0.91
PHGDH-211ENST00000641213 ZCRB1Q8TBF4 217 aaKnown RBP20.73■□□□□ 0.91
PHGDH-211ENST00000641213 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.73■□□□□ 0.91
PHGDH-211ENST00000641213 RAD50Q92878 1312 aa20.72■□□□□ 0.91
PHGDH-211ENST00000641213 PKP1Q13835 747 aa20.72■□□□□ 0.91
PHGDH-211ENST00000641213 ZNF335Q9H4Z2 1342 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-211ENST00000641213 GOLGA6L3A6NEY3 463 aa20.71■□□□□ 0.91
PHGDH-211ENST00000641213 EPHA10Q5JZY3 1008 aa20.71■□□□□ 0.91
PHGDH-211ENST00000641213 LSG1Q9H089 658 aaKnown RBP20.71■□□□□ 0.91
PHGDH-211ENST00000641213 CWC27Q6UX04 472 aaKnown RBP20.71■□□□□ 0.91
PHGDH-211ENST00000641213 NUP188Q5SRE5 1749 aa20.71■□□□□ 0.91
PHGDH-211ENST00000641213 GOLGA6L22H0YM25 854 aa20.7■□□□□ 0.9
PHGDH-211ENST00000641213 EAF2Q96CJ1 260 aaPredicted RBP20.7■□□□□ 0.9
PHGDH-211ENST00000641213 SIL1Q9H173 461 aa20.69■□□□□ 0.9
PHGDH-211ENST00000641213 CUL4AQ13619 759 aa20.69■□□□□ 0.9
PHGDH-211ENST00000641213 KLHDC4Q8TBB5 520 aa20.69■□□□□ 0.9
PHGDH-211ENST00000641213 UPF3BQ9BZI7 483 aaKnown RBP20.69■□□□□ 0.9
PHGDH-211ENST00000641213 NHSL1Q5SYE7 1610 aa20.69■□□□□ 0.9
PHGDH-211ENST00000641213 ERVV-2B6SEH9 535 aa20.68■□□□□ 0.9
PHGDH-211ENST00000641213 DIAPH3Q9NSV4 1193 aa20.68■□□□□ 0.9
PHGDH-211ENST00000641213 ZDHHC9Q9Y397 364 aa20.68■□□□□ 0.9
PHGDH-211ENST00000641213 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
PHGDH-211ENST00000641213 PLBD2Q8NHP8 589 aa20.68■□□□□ 0.9
PHGDH-211ENST00000641213 EVI5LQ96CN4 794 aa20.68■□□□□ 0.9
PHGDH-211ENST00000641213 CARD10Q9BWT7 1032 aa20.68■□□□□ 0.9
PHGDH-211ENST00000641213 CCDC8Q9H0W5 538 aaPredicted RBP20.68■□□□□ 0.9
PHGDH-211ENST00000641213 COL15A1P39059 1388 aa20.67■□□□□ 0.9
PHGDH-211ENST00000641213 NKX1-1Q15270 411 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-211ENST00000641213 KIAA1211Q6ZU35 1233 aa20.67■□□□□ 0.9
PHGDH-211ENST00000641213 RUFY2Q8WXA3 655 aa20.67■□□□□ 0.9
PHGDH-211ENST00000641213 JARID2Q92833 1246 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-211ENST00000641213 SNX14Q9Y5W7 946 aa20.67■□□□□ 0.9
PHGDH-211ENST00000641213 ERBB4Q15303 1308 aa20.66■□□□□ 0.9
PHGDH-211ENST00000641213 IL2RBP14784 551 aa20.66■□□□□ 0.9
PHGDH-211ENST00000641213 NBPF26B4DH59 902 aa20.66■□□□□ 0.9
PHGDH-211ENST00000641213 NBPF14Q5TI25 921 aa20.66■□□□□ 0.9
PHGDH-211ENST00000641213 NBPF10Q6P3W6 841 aaKnown RBP20.66■□□□□ 0.9
PHGDH-211ENST00000641213 NOL8Q76FK4 1167 aaKnown RBP20.66■□□□□ 0.9
PHGDH-211ENST00000641213 UBE3BQ7Z3V4 1068 aa20.66■□□□□ 0.9
PHGDH-211ENST00000641213 NBPF15Q8N660 670 aa20.66■□□□□ 0.9
PHGDH-211ENST00000641213 TLR7Q9NYK1 1049 aaKnown RBP20.66■□□□□ 0.9
PHGDH-211ENST00000641213 TOGARAM1Q9Y4F4 1720 aa20.66■□□□□ 0.9
PHGDH-211ENST00000641213 ATP5J2-PTCD1G3V325 749 aa20.65■□□□□ 0.9
PHGDH-211ENST00000641213 PTCD1O75127 700 aaKnown RBP20.65■□□□□ 0.9
PHGDH-211ENST00000641213 XRCC6P12956 609 aaKnown RBP eCLIP20.65■□□□□ 0.95e-6■■□□□ 11.5
PHGDH-211ENST00000641213 RFX5P48382 616 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-211ENST00000641213 INTS4Q96HW7 963 aaKnown RBP20.65■□□□□ 0.9
PHGDH-211ENST00000641213 ARXQ96QS3 562 aa20.65■□□□□ 0.9
PHGDH-211ENST00000641213 COPRSQ9NQ92 184 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms