RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 PPP2R1AP30153 589 aa12.54□□□□□ -0.4
KCNMA1-259ENST00000639406 ARHGAP25P42331 645 aa12.54□□□□□ -0.4
KCNMA1-259ENST00000639406 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
KCNMA1-259ENST00000639406 FAM200AQ8TCP9 573 aa12.54□□□□□ -0.4
KCNMA1-259ENST00000639406 STMN4Q9H169 189 aaPredicted RBP12.54□□□□□ -0.4
KCNMA1-259ENST00000639406 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
KCNMA1-259ENST00000639406 MKRN1Q9UHC7 482 aaKnown RBP12.54□□□□□ -0.4
KCNMA1-259ENST00000639406 WDHD1O75717 1129 aaPredicted RBP12.54□□□□□ -0.4
KCNMA1-259ENST00000639406 SLC3A2P08195 630 aaKnown RBP12.54□□□□□ -0.4
KCNMA1-259ENST00000639406 TDRD12Q587J7 1177 aaKnown RBP12.54□□□□□ -0.4
KCNMA1-259ENST00000639406 SMC6Q96SB8 1091 aa12.54□□□□□ -0.4
KCNMA1-259ENST00000639406 PPP1R12BO60237 982 aaPredicted RBP12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 RHOXF2BP0C7M4 288 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 MX1P20591 662 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 FAM160A1Q05DH4 1040 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 PDE1CQ14123 709 aaPredicted RBP12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 ZSCAN26Q16670 478 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 ARFGAP2Q8N6H7 521 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 RHOXF2Q9BQY4 288 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 SIL1Q9H173 461 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 HOMER2Q9NSB8 354 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 PROSER2Q86WR7 435 aaPredicted RBP12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 TTC5Q8N0Z6 440 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 PUF60Q9UHX1 559 aaKnown RBP12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 TOP2AP11388 1531 aaKnown RBP12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 HMOX1P09601 288 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 TSNAXIP1Q2TAA8 658 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 TBC1D2BQ9UPU7 963 aa12.53□□□□□ -0.4
KCNMA1-259ENST00000639406 IFT74Q96LB3 600 aa12.52□□□□□ -0.4
KCNMA1-259ENST00000639406 CWC25Q9NXE8 425 aaPredicted RBP12.52□□□□□ -0.4
KCNMA1-259ENST00000639406 NDUFAB1O14561 156 aa12.52□□□□□ -0.4
KCNMA1-259ENST00000639406 STX6O43752 255 aa12.52□□□□□ -0.4
KCNMA1-259ENST00000639406 CCDC172P0C7W6 258 aa12.52□□□□□ -0.4
KCNMA1-259ENST00000639406 PEX19P40855 299 aa12.52□□□□□ -0.4
KCNMA1-259ENST00000639406 DBN1Q16643 649 aa12.52□□□□□ -0.4
KCNMA1-259ENST00000639406 CCDC184Q52MB2 194 aa12.52□□□□□ -0.4
KCNMA1-259ENST00000639406 CCDC158Q5M9N0 1113 aa12.52□□□□□ -0.4
KCNMA1-259ENST00000639406 TSR2Q969E8 191 aaKnown RBP12.52□□□□□ -0.4
KCNMA1-259ENST00000639406 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.4
KCNMA1-259ENST00000639406 PSME1Q06323 249 aa12.52□□□□□ -0.41
KCNMA1-259ENST00000639406 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
KCNMA1-259ENST00000639406 STMN2Q93045 179 aa12.52□□□□□ -0.41
KCNMA1-259ENST00000639406 SETDB1Q15047 1291 aa12.52□□□□□ -0.41
KCNMA1-259ENST00000639406 TWISTNBQ3B726 338 aaPredicted RBP12.52□□□□□ -0.41
KCNMA1-259ENST00000639406 CNNM3Q8NE01 707 aa12.52□□□□□ -0.41
KCNMA1-259ENST00000639406 UBASH3AP57075 661 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 EVCP57679 992 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 SH2D4BQ5SQS7 431 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 MICAL1Q8TDZ2 1067 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 WASF1Q92558 559 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 OAS2P29728 719 aaKnown RBP12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 CCDC96Q2M329 555 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 TRIM7Q9C029 511 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 RABGAP1Q9Y3P9 1069 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 UACAQ9BZF9 1416 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 PRPF4BQ13523 1007 aaKnown RBP12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 ZNF365Q70YC5 407 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 TUBBP07437 444 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 ANAPC15P60006 121 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 SYT1P21579 422 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 GJB2P29033 226 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 PPP2R5AQ15172 486 aa12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 RPUSD2Q8IZ73 545 aaKnown RBP12.51□□□□□ -0.41
KCNMA1-259ENST00000639406 PPP2R3AQ06190 1150 aa12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 GBP7Q8N8V2 638 aaPredicted RBP12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 RLBP1P12271 317 aa12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 C20orf194Q5TEA3 1177 aa12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 C16orf71Q8IYS4 520 aaPredicted RBP12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 LIMCH1Q9UPQ0 1083 aa12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 ELF2Q15723 593 aa12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 CCDC38Q502W7 563 aa12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 USP48Q86UV5 1035 aa12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 TMEM57Q8N5G2 664 aa12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 PPP1R14CQ8TAE6 165 aa12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 TSG101Q99816 390 aa12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 EFCC1Q9HA90 598 aa12.5□□□□□ -0.41
KCNMA1-259ENST00000639406 ZBTB16Q05516 673 aa12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 CCDC30Q5VVM6 783 aa12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 PAF1Q8N7H5 531 aa12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 TFIP11Q9UBB9 837 aaKnown RBP12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 RAB3IL1Q8TBN0 382 aa12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 TOM1O60784 492 aa12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 TMEM132AQ24JP5 1023 aa12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 KIAA0753Q2KHM9 967 aa12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 APBB1IPQ7Z5R6 666 aaPredicted RBP12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 MIA2Q96PC5 1412 aa12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 FERP16591 822 aa12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 SYTL4Q96C24 671 aaPredicted RBP12.49□□□□□ -0.41
KCNMA1-259ENST00000639406 CCT4P50991 539 aaKnown RBP12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 AIMP1Q12904 312 aaKnown RBP12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 PRPF40BQ6NWY9 871 aaKnown RBP12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 THEMISQ8N1K5 641 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 TRIM4Q9C037 500 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 CASQ2O14958 399 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 SOGA3Q5TF21 947 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 ISM2Q6H9L7 571 aa12.48□□□□□ -0.41
KCNMA1-259ENST00000639406 PIBF1Q8WXW3 757 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms