RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ZNF692Q9BU19 519 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-253ENST00000637927 JAG2Q9Y219 1238 aa19.62■□□□□ 0.73
CACNA1A-253ENST00000637927 A0A1W2PRG0 241 aa19.62■□□□□ 0.73
CACNA1A-253ENST00000637927 IFIT1P09914 478 aaKnown RBP19.62■□□□□ 0.73
CACNA1A-253ENST00000637927 TRMT112Q9UI30 125 aaKnown RBP19.62■□□□□ 0.73
CACNA1A-253ENST00000637927 SYCE3A1L190 88 aa19.62■□□□□ 0.73
CACNA1A-253ENST00000637927 IQSEC3Q9UPP2 1182 aaPredicted RBP19.62■□□□□ 0.73
CACNA1A-253ENST00000637927 URI1O94763 535 aaPredicted RBP19.62■□□□□ 0.73
CACNA1A-253ENST00000637927 ERCC5P28715 1186 aaPredicted RBP19.62■□□□□ 0.73
CACNA1A-253ENST00000637927 BIRC2Q13490 618 aa19.62■□□□□ 0.73
CACNA1A-253ENST00000637927 NGLY1Q96IV0 654 aa19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 UIMC1Q96RL1 719 aa19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 CBFA2T2O43439 604 aa19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 TPD52P55327 224 aaPredicted RBP19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 ARID5AQ03989 594 aa19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 ZBTB3Q9H5J0 574 aa19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 NSD3Q9BZ95 1437 aa19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 SPATA24Q86W54 205 aa19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 MRRFQ96E11 262 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 IGF1RP08069 1367 aa19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 IDEP14735 1019 aa19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 FKBP15Q5T1M5 1219 aa19.61■□□□□ 0.73
CACNA1A-253ENST00000637927 NBPF8Q3BBV2 869 aa19.6■□□□□ 0.73
CACNA1A-253ENST00000637927 NAPBQ9H115 298 aa19.6■□□□□ 0.73
CACNA1A-253ENST00000637927 PKD2L1Q9P0L9 805 aa19.6■□□□□ 0.73
CACNA1A-253ENST00000637927 GNL1P36915 607 aaPredicted RBP19.6■□□□□ 0.73
CACNA1A-253ENST00000637927 TSHZ3Q63HK5 1081 aa19.6■□□□□ 0.73
CACNA1A-253ENST00000637927 ZNF652Q9Y2D9 606 aa19.6■□□□□ 0.73
CACNA1A-253ENST00000637927 KIF4BQ2VIQ3 1234 aa19.6■□□□□ 0.73
CACNA1A-253ENST00000637927 HAND2P61296 217 aa19.59■□□□□ 0.73
CACNA1A-253ENST00000637927 PPP2R5DQ14738 602 aa19.59■□□□□ 0.73
CACNA1A-253ENST00000637927 KIF21BO75037 1637 aa19.59■□□□□ 0.73
CACNA1A-253ENST00000637927 IQCEQ6IPM2 695 aa19.59■□□□□ 0.73
CACNA1A-253ENST00000637927 ATP5J2-PTCD1G3V325 749 aa19.59■□□□□ 0.73
CACNA1A-253ENST00000637927 CTNNA3Q9UI47 895 aa19.59■□□□□ 0.73
CACNA1A-253ENST00000637927 RASA3Q14644 834 aa19.59■□□□□ 0.73
CACNA1A-253ENST00000637927 ODF2LQ9ULJ1 636 aa19.59■□□□□ 0.73
CACNA1A-253ENST00000637927 BANK1Q8NDB2 785 aa19.58■□□□□ 0.73
CACNA1A-253ENST00000637927 PHACTR2O75167 634 aa19.58■□□□□ 0.73
CACNA1A-253ENST00000637927 FAM160A1Q05DH4 1040 aa19.58■□□□□ 0.73
CACNA1A-253ENST00000637927 CCDC65Q8IXS2 484 aa19.58■□□□□ 0.73
CACNA1A-253ENST00000637927 CEBPAP49715 358 aaPredicted RBP19.58■□□□□ 0.72
CACNA1A-253ENST00000637927 SHTN1A0MZ66 631 aa19.58■□□□□ 0.72
CACNA1A-253ENST00000637927 MTIF2P46199 727 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-253ENST00000637927 NAA25Q14CX7 972 aa19.58■□□□□ 0.72
CACNA1A-253ENST00000637927 C9orf84Q5VXU9 1444 aa19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 FOXO3O43524 673 aa19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 NME9Q86XW9 330 aa19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 GRPEL1Q9HAV7 217 aa19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 VEZTQ9HBM0 779 aa19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 SNRKQ9NRH2 765 aa19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 CCDC40Q4G0X9 1142 aa19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 SF3A3Q12874 501 aaKnown RBP eCLIP19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 TAF7Q15545 349 aaPredicted RBP19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 HAUS7Q99871 368 aa19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 PFDN4Q9NQP4 134 aa19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 GCOM1H8Y6P7 765 aaPredicted RBP19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 MYZAPP0CAP1 466 aa19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 GIGYF2Q6Y7W6 1299 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 SYNJ2O15056 1496 aa19.57■□□□□ 0.72
CACNA1A-253ENST00000637927 ERCC3P19447 782 aa19.56■□□□□ 0.72
CACNA1A-253ENST00000637927 TMPOP42166 694 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-253ENST00000637927 PRKG1Q13976 671 aa19.56■□□□□ 0.72
CACNA1A-253ENST00000637927 IFIT5Q13325 482 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-253ENST00000637927 EEF2P13639 858 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-253ENST00000637927 GSTA5Q7RTV2 222 aa19.55■□□□□ 0.72
CACNA1A-253ENST00000637927 IKBKGQ9Y6K9 419 aa19.55■□□□□ 0.72
CACNA1A-253ENST00000637927 ANKRD18BA2A2Z9 1011 aa19.55■□□□□ 0.72
CACNA1A-253ENST00000637927 SATB1Q01826 763 aa19.55■□□□□ 0.72
CACNA1A-253ENST00000637927 CEP131Q9UPN4 1083 aa19.55■□□□□ 0.72
CACNA1A-253ENST00000637927 SLC12A7Q9Y666 1083 aa19.55■□□□□ 0.72
CACNA1A-253ENST00000637927 FSD2A1L4K1 749 aa19.54■□□□□ 0.72
CACNA1A-253ENST00000637927 HARSP12081 509 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-253ENST00000637927 TXLNBQ8N3L3 684 aa19.54■□□□□ 0.72
CACNA1A-253ENST00000637927 CCDC175P0C221 793 aa19.54■□□□□ 0.72
CACNA1A-253ENST00000637927 WASF1Q92558 559 aa19.54■□□□□ 0.72
CACNA1A-253ENST00000637927 NFE2L2Q16236 605 aa19.54■□□□□ 0.72
CACNA1A-253ENST00000637927 CALM1P0DP23 149 aa19.53■□□□□ 0.72
CACNA1A-253ENST00000637927 CALM2P0DP24 149 aa19.53■□□□□ 0.72
CACNA1A-253ENST00000637927 CALM3P0DP25 149 aa19.53■□□□□ 0.72
CACNA1A-253ENST00000637927 SLC5A1P13866 664 aa19.53■□□□□ 0.72
CACNA1A-253ENST00000637927 SSRP1Q08945 709 aaKnown RBP19.53■□□□□ 0.72
CACNA1A-253ENST00000637927 CCDC50Q8IVM0 306 aa19.53■□□□□ 0.72
CACNA1A-253ENST00000637927 MYCP01106 439 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-253ENST00000637927 ZNF213O14771 459 aa19.53■□□□□ 0.72
CACNA1A-253ENST00000637927 CHRNA2Q15822 529 aa19.53■□□□□ 0.72
CACNA1A-253ENST00000637927 JADE2Q9NQC1 790 aa19.53■□□□□ 0.72
CACNA1A-253ENST00000637927 UTP14AQ9BVJ6 771 aaKnown RBP19.53■□□□□ 0.72
CACNA1A-253ENST00000637927 IFIT3O14879 490 aaKnown RBP19.52■□□□□ 0.72
CACNA1A-253ENST00000637927 RIMBP2O15034 1052 aa19.52■□□□□ 0.72
CACNA1A-253ENST00000637927 FBLN1P23142 703 aa19.52■□□□□ 0.72
CACNA1A-253ENST00000637927 AKAP2Q9Y2D5 859 aa19.52■□□□□ 0.72
CACNA1A-253ENST00000637927 PTGS1P23219 599 aa19.52■□□□□ 0.72
CACNA1A-253ENST00000637927 GEN1Q17RS7 908 aa19.52■□□□□ 0.72
CACNA1A-253ENST00000637927 MAP3K2Q9Y2U5 619 aa19.52■□□□□ 0.72
CACNA1A-253ENST00000637927 GABPAQ06546 454 aa19.52■□□□□ 0.72
CACNA1A-253ENST00000637927 GDPD2Q9HCC8 539 aa19.52■□□□□ 0.72
CACNA1A-253ENST00000637927 GJA3Q9Y6H8 435 aa19.52■□□□□ 0.71
CACNA1A-253ENST00000637927 PDE3AQ14432 1141 aa19.51■□□□□ 0.71
CACNA1A-253ENST00000637927 GINS2Q9Y248 185 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms