RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PARP4Q9UKK3 1724 aaKnown RBP14.13□□□□□ -0.15
CLN6-217ENST00000636964 ERVV-2B6SEH9 535 aa14.13□□□□□ -0.15
CLN6-217ENST00000636964 SURF6O75683 361 aaKnown RBP14.13□□□□□ -0.15
CLN6-217ENST00000636964 HSP90AA1P07900 732 aaKnown RBP14.13□□□□□ -0.15
CLN6-217ENST00000636964 JARID2Q92833 1246 aaPredicted RBP14.13□□□□□ -0.15
CLN6-217ENST00000636964 LRRCC1Q9C099 1032 aa14.13□□□□□ -0.15
CLN6-217ENST00000636964 LTBP4Q8N2S1 1624 aa14.13□□□□□ -0.15
CLN6-217ENST00000636964 PLCD3Q8N3E9 789 aa14.13□□□□□ -0.15
CLN6-217ENST00000636964 KAT6BQ8WYB5 2073 aa14.13□□□□□ -0.15
CLN6-217ENST00000636964 MRC1P22897 1456 aa14.13□□□□□ -0.15
CLN6-217ENST00000636964 NKX1-1Q15270 411 aaPredicted RBP14.13□□□□□ -0.15
CLN6-217ENST00000636964 SSH3Q8TE77 659 aa14.13□□□□□ -0.15
CLN6-217ENST00000636964 MYD88Q99836 296 aa14.13□□□□□ -0.15
CLN6-217ENST00000636964 CNPY4Q8N129 248 aa14.12□□□□□ -0.15
CLN6-217ENST00000636964 A1BGP04217 495 aa14.12□□□□□ -0.15
CLN6-217ENST00000636964 IGKV5-2P06315 115 aa14.12□□□□□ -0.15
CLN6-217ENST00000636964 ANKRD13DQ6ZTN6 518 aa14.12□□□□□ -0.15
CLN6-217ENST00000636964 LINS1Q8NG48 757 aa14.12□□□□□ -0.15
CLN6-217ENST00000636964 ALDH1L1O75891 902 aa14.12□□□□□ -0.15
CLN6-217ENST00000636964 TEX2Q8IWB9 1127 aa14.12□□□□□ -0.15
CLN6-217ENST00000636964 LRP10Q7Z4F1 713 aa14.11□□□□□ -0.15
CLN6-217ENST00000636964 PLEKHG2Q9H7P9 1386 aa14.11□□□□□ -0.15
CLN6-217ENST00000636964 PDE1AP54750 535 aa14.11□□□□□ -0.15
CLN6-217ENST00000636964 GZF1Q9H116 711 aaPredicted RBP14.11□□□□□ -0.15
CLN6-217ENST00000636964 TMOD3Q9NYL9 352 aa14.11□□□□□ -0.15
CLN6-217ENST00000636964 IBTKQ9P2D0 1353 aaPredicted RBP14.11□□□□□ -0.15
CLN6-217ENST00000636964 NBPF26B4DH59 902 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 ATP5J2-PTCD1G3V325 749 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 SDSP20132 328 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 NBPF14Q5TI25 921 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 NBPF10Q6P3W6 841 aaKnown RBP14.1□□□□□ -0.15
CLN6-217ENST00000636964 NBPF15Q8N660 670 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 GRM8O00222 908 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 NEXNQ0ZGT2 675 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 POLA2Q14181 598 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 SUCLG2Q96I99 432 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 ASAP1Q9ULH1 1129 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 CDC45O75419 566 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 NUTM1Q86Y26 1132 aa14.1□□□□□ -0.15
CLN6-217ENST00000636964 SYTL4Q96C24 671 aaPredicted RBP14.1□□□□□ -0.15
CLN6-217ENST00000636964 PA2G4Q9UQ80 394 aaKnown RBP14.1□□□□□ -0.15
CLN6-217ENST00000636964 N4BP2Q86UW6 1770 aaPredicted RBP14.09□□□□□ -0.15
CLN6-217ENST00000636964 ZNF330Q9Y3S2 320 aaPredicted RBP14.09□□□□□ -0.15
CLN6-217ENST00000636964 A0A0G2JS52 829 aa14.09□□□□□ -0.15
CLN6-217ENST00000636964 GOLGA6L3A6NEY3 463 aa14.09□□□□□ -0.15
CLN6-217ENST00000636964 PIGBQ92521 554 aa14.09□□□□□ -0.15
CLN6-217ENST00000636964 METTL22Q9BUU2 404 aaPredicted RBP14.09□□□□□ -0.15
CLN6-217ENST00000636964 PRDM4Q9UKN5 801 aa14.09□□□□□ -0.15
CLN6-217ENST00000636964 NEURL1BA8MQ27 555 aa14.08□□□□□ -0.15
CLN6-217ENST00000636964 KAZALD1Q96I82 304 aa14.08□□□□□ -0.15
CLN6-217ENST00000636964 OS9Q13438 667 aaPredicted RBP14.08□□□□□ -0.16
CLN6-217ENST00000636964 TTLL7Q6ZT98 887 aa14.08□□□□□ -0.16
CLN6-217ENST00000636964 TBC1D2Q9BYX2 928 aa14.08□□□□□ -0.16
CLN6-217ENST00000636964 BICC1Q9H694 974 aaKnown RBP14.08□□□□□ -0.16
CLN6-217ENST00000636964 SHANK3Q9BYB0 1731 aa14.08□□□□□ -0.16
CLN6-217ENST00000636964 AHDC1Q5TGY3 1603 aaPredicted RBP14.08□□□□□ -0.16
CLN6-217ENST00000636964 EXOC5O00471 708 aa14.08□□□□□ -0.16
CLN6-217ENST00000636964 MX1P20591 662 aa14.08□□□□□ -0.16
CLN6-217ENST00000636964 RHPN1Q8TCX5 695 aa14.08□□□□□ -0.16
CLN6-217ENST00000636964 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
CLN6-217ENST00000636964 TOM1O60784 492 aa14.07□□□□□ -0.16
CLN6-217ENST00000636964 PRDM10Q9NQV6 1147 aa14.07□□□□□ -0.16
CLN6-217ENST00000636964 CCDC9Q9Y3X0 531 aaKnown RBP14.07□□□□□ -0.16
CLN6-217ENST00000636964 GCKRQ14397 625 aa14.07□□□□□ -0.16
CLN6-217ENST00000636964 SPRYD3Q8NCJ5 442 aa14.07□□□□□ -0.16
CLN6-217ENST00000636964 ZBTB3Q9H5J0 574 aa14.06□□□□□ -0.16
CLN6-217ENST00000636964 UBAP1LF5GYI3 381 aa14.06□□□□□ -0.16
CLN6-217ENST00000636964 COL16A1Q07092 1604 aaPredicted RBP14.06□□□□□ -0.16
CLN6-217ENST00000636964 COL14A1Q05707 1796 aaKnown RBP14.06□□□□□ -0.16
CLN6-217ENST00000636964 KCNA4P22459 653 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 BECN1Q14457 450 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 EPHA10Q5JZY3 1008 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 KLHDC4Q8TBB5 520 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 RILPL2Q969X0 211 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 SALL3Q9BXA9 1300 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 TRIM6-TRIM34B2RNG4 842 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 MAP4K4O95819 1239 aaPredicted RBP14.05□□□□□ -0.16
CLN6-217ENST00000636964 MCM4P33991 863 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 UBE3BQ7Z3V4 1068 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 DNAJC10Q8IXB1 793 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 SIL1Q9H173 461 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 OSBPL3Q9H4L5 887 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 ATG3Q9NT62 314 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 PHLPP1O60346 1717 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 RAB11FIP3O75154 756 aa14.05□□□□□ -0.16
CLN6-217ENST00000636964 PLBD2Q8NHP8 589 aa14.04□□□□□ -0.16
CLN6-217ENST00000636964 KIF1BPQ96EK5 621 aa14.04□□□□□ -0.16
CLN6-217ENST00000636964 KCPQ6ZWJ8 1503 aa14.04□□□□□ -0.16
CLN6-217ENST00000636964 GLI3P10071 1580 aa14.04□□□□□ -0.16
CLN6-217ENST00000636964 NCLP19338 710 aaKnown RBP14.04□□□□□ -0.16
CLN6-217ENST00000636964 MTX1Q13505 466 aa14.04□□□□□ -0.16
CLN6-217ENST00000636964 TOGARAM1Q9Y4F4 1720 aa14.04□□□□□ -0.16
CLN6-217ENST00000636964 A0A087WZG4 1122 aa14.03□□□□□ -0.16
CLN6-217ENST00000636964 UNC5CLQ8IV45 518 aa14.03□□□□□ -0.16
CLN6-217ENST00000636964 UTYO14607 1347 aa14.03□□□□□ -0.16
CLN6-217ENST00000636964 PRIM1P49642 420 aaKnown RBP14.03□□□□□ -0.16
CLN6-217ENST00000636964 DISP2A7MBM2 1401 aa14.03□□□□□ -0.16
CLN6-217ENST00000636964 RBM25P49756 843 aaKnown RBP14.03□□□□□ -0.16
CLN6-217ENST00000636964 HDAC5Q9UQL6 1122 aa14.03□□□□□ -0.16
CLN6-217ENST00000636964 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 378.5 ms