RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 GAPVD1Q14C86 1478 aa20.61■□□□□ 0.89
CACNA1A-227ENST00000636549 NBPF6Q5VWK0 638 aa20.61■□□□□ 0.89
CACNA1A-227ENST00000636549 NBPF5PQ86XG9 351 aaPredicted RBP20.61■□□□□ 0.89
CACNA1A-227ENST00000636549 IQCA1Q86XH1 822 aa20.61■□□□□ 0.89
CACNA1A-227ENST00000636549 NBPF4Q96M43 638 aa20.61■□□□□ 0.89
CACNA1A-227ENST00000636549 ARID5AQ03989 594 aa20.61■□□□□ 0.89
CACNA1A-227ENST00000636549 DUSP27Q5VZP5 1158 aa20.61■□□□□ 0.89
CACNA1A-227ENST00000636549 CATIPQ7Z7H3 387 aa20.61■□□□□ 0.89
CACNA1A-227ENST00000636549 CCDC63Q8NA47 563 aa20.61■□□□□ 0.89
CACNA1A-227ENST00000636549 K7ELQ4 463 aaPredicted RBP20.6■□□□□ 0.89
CACNA1A-227ENST00000636549 EIF3JO75822 258 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-227ENST00000636549 HARSP12081 509 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-227ENST00000636549 AKAP2Q9Y2D5 859 aa20.6■□□□□ 0.89
CACNA1A-227ENST00000636549 MRE11P49959 708 aa20.6■□□□□ 0.89
CACNA1A-227ENST00000636549 WDR33Q9C0J8 1336 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-227ENST00000636549 TAF7Q15545 349 aaPredicted RBP20.6■□□□□ 0.89
CACNA1A-227ENST00000636549 SPECC1Q5M775 1068 aa20.6■□□□□ 0.89
CACNA1A-227ENST00000636549 STX8Q9UNK0 236 aa20.6■□□□□ 0.89
CACNA1A-227ENST00000636549 ZWINTO95229 277 aa20.59■□□□□ 0.89
CACNA1A-227ENST00000636549 MYCP01106 439 aaPredicted RBP20.59■□□□□ 0.89
CACNA1A-227ENST00000636549 C8orf76Q96K31 380 aa20.59■□□□□ 0.89
CACNA1A-227ENST00000636549 PPP2R5CQ13362 524 aa20.59■□□□□ 0.89
CACNA1A-227ENST00000636549 KIF4BQ2VIQ3 1234 aa20.59■□□□□ 0.89
CACNA1A-227ENST00000636549 HEATR3Q7Z4Q2 680 aa20.59■□□□□ 0.89
CACNA1A-227ENST00000636549 MICU3Q86XE3 530 aa20.59■□□□□ 0.89
CACNA1A-227ENST00000636549 RAB3IL1Q8TBN0 382 aa20.59■□□□□ 0.89
CACNA1A-227ENST00000636549 TCHPQ9BT92 498 aa20.58■□□□□ 0.89
CACNA1A-227ENST00000636549 NDC80O14777 642 aa20.58■□□□□ 0.89
CACNA1A-227ENST00000636549 BIRC2Q13490 618 aa20.58■□□□□ 0.89
CACNA1A-227ENST00000636549 GINS2Q9Y248 185 aa20.58■□□□□ 0.89
CACNA1A-227ENST00000636549 URI1O94763 535 aaPredicted RBP20.58■□□□□ 0.89
CACNA1A-227ENST00000636549 ANXA1P04083 346 aa20.58■□□□□ 0.89
CACNA1A-227ENST00000636549 PPARDQ03181 441 aa20.58■□□□□ 0.89
CACNA1A-227ENST00000636549 SPOUT1Q5T280 376 aaKnown RBP20.58■□□□□ 0.89
CACNA1A-227ENST00000636549 GCC1Q96CN9 775 aa20.58■□□□□ 0.89
CACNA1A-227ENST00000636549 NOP9Q86U38 636 aaKnown RBP20.58■□□□□ 0.88
CACNA1A-227ENST00000636549 CRACR2AQ9BSW2 395 aa20.58■□□□□ 0.88
CACNA1A-227ENST00000636549 CNNM3Q8NE01 707 aa20.58■□□□□ 0.88
CACNA1A-227ENST00000636549 SLC26A6Q9BXS9 759 aa20.58■□□□□ 0.88
CACNA1A-227ENST00000636549 HLA-DOAP06340 250 aa20.58■□□□□ 0.88
CACNA1A-227ENST00000636549 ATP6V1AP38606 617 aa20.58■□□□□ 0.88
CACNA1A-227ENST00000636549 MAATS1Q7Z4T9 603 aa20.57■□□□□ 0.88
CACNA1A-227ENST00000636549 SMTNL1A8MU46 457 aa20.57■□□□□ 0.88
CACNA1A-227ENST00000636549 SORBS3O60504 671 aa20.57■□□□□ 0.88
CACNA1A-227ENST00000636549 TMEM67Q5HYA8 995 aa20.57■□□□□ 0.88
CACNA1A-227ENST00000636549 CCDC174Q6PII3 467 aa20.57■□□□□ 0.88
CACNA1A-227ENST00000636549 MBD3O95983 291 aa20.57■□□□□ 0.88
CACNA1A-227ENST00000636549 TSPY3P0CV98 308 aa20.57■□□□□ 0.88
CACNA1A-227ENST00000636549 TSPY8P0CW00 308 aa20.57■□□□□ 0.88
CACNA1A-227ENST00000636549 FNBP4Q8N3X1 1017 aaPredicted RBP20.57■□□□□ 0.88
CACNA1A-227ENST00000636549 CALML4Q96GE6 196 aa20.57■□□□□ 0.88
CACNA1A-227ENST00000636549 SCAPERQ9BY12 1400 aa20.56■□□□□ 0.88
CACNA1A-227ENST00000636549 PPM1EQ8WY54 764 aa20.56■□□□□ 0.88
CACNA1A-227ENST00000636549 SBNO2Q9Y2G9 1366 aa20.56■□□□□ 0.88
CACNA1A-227ENST00000636549 A0A087WZG4 1122 aa20.56■□□□□ 0.88
CACNA1A-227ENST00000636549 MXRA7P84157 204 aa20.56■□□□□ 0.88
CACNA1A-227ENST00000636549 GDPD2Q9HCC8 539 aa20.56■□□□□ 0.88
CACNA1A-227ENST00000636549 EEF2P13639 858 aaKnown RBP20.56■□□□□ 0.88
CACNA1A-227ENST00000636549 MAP3K2Q9Y2U5 619 aa20.56■□□□□ 0.88
CACNA1A-227ENST00000636549 AFMP43652 599 aa20.56■□□□□ 0.88
CACNA1A-227ENST00000636549 TFCP2L1Q9NZI6 479 aa20.56■□□□□ 0.88
CACNA1A-227ENST00000636549 SMIM23A6NLE4 172 aa20.55■□□□□ 0.88
CACNA1A-227ENST00000636549 NUDT16Q96DE0 195 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-227ENST00000636549 LRRC2Q9BYS8 371 aa20.55■□□□□ 0.88
CACNA1A-227ENST00000636549 VPS36Q86VN1 386 aa20.55■□□□□ 0.88
CACNA1A-227ENST00000636549 TFIP11Q9UBB9 837 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-227ENST00000636549 TMEM57Q8N5G2 664 aa20.55■□□□□ 0.88
CACNA1A-227ENST00000636549 TIGD1Q96MW7 591 aa20.55■□□□□ 0.88
CACNA1A-227ENST00000636549 U3KPZ7 1027 aaPredicted RBP20.55■□□□□ 0.88
CACNA1A-227ENST00000636549 PLIN2Q99541 437 aa20.55■□□□□ 0.88
CACNA1A-227ENST00000636549 A0A1W2PRG0 241 aa20.54■□□□□ 0.88
CACNA1A-227ENST00000636549 ZYXQ15942 572 aaKnown RBP20.54■□□□□ 0.88
CACNA1A-227ENST00000636549 GIGYF2Q6Y7W6 1299 aaKnown RBP20.54■□□□□ 0.88
CACNA1A-227ENST00000636549 CLSTN2Q9H4D0 955 aa20.54■□□□□ 0.88
CACNA1A-227ENST00000636549 RRBP1Q9P2E9 1410 aaKnown RBP20.54■□□□□ 0.88
CACNA1A-227ENST00000636549 EAPPQ56P03 285 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-227ENST00000636549 MYOM3Q5VTT5 1437 aa20.54■□□□□ 0.88
CACNA1A-227ENST00000636549 CCDC7Q96M83 1385 aa20.54■□□□□ 0.88
CACNA1A-227ENST00000636549 RASA3Q14644 834 aa20.54■□□□□ 0.88
CACNA1A-227ENST00000636549 ZNF526Q8TF50 670 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-227ENST00000636549 MPHOSPH6Q99547 160 aaKnown RBP20.54■□□□□ 0.88
CACNA1A-227ENST00000636549 CCDC66A2RUB6 948 aa20.53■□□□□ 0.88
CACNA1A-227ENST00000636549 GCOM1H8Y6P7 765 aaPredicted RBP20.53■□□□□ 0.88
CACNA1A-227ENST00000636549 MYZAPP0CAP1 466 aa20.53■□□□□ 0.88
CACNA1A-227ENST00000636549 GSTA5Q7RTV2 222 aa20.53■□□□□ 0.88
CACNA1A-227ENST00000636549 TOP1P11387 765 aaKnown RBP20.53■□□□□ 0.88
CACNA1A-227ENST00000636549 CFAP58Q5T655 872 aa20.53■□□□□ 0.88
CACNA1A-227ENST00000636549 SLF2Q8IX21 1173 aa20.53■□□□□ 0.88
CACNA1A-227ENST00000636549 KCNA4P22459 653 aa20.53■□□□□ 0.88
CACNA1A-227ENST00000636549 IRX5P78411 483 aaPredicted RBP20.53■□□□□ 0.88
CACNA1A-227ENST00000636549 CCDC50Q8IVM0 306 aa20.53■□□□□ 0.88
CACNA1A-227ENST00000636549 NAIPQ13075 1403 aa20.52■□□□□ 0.88
CACNA1A-227ENST00000636549 MCM2P49736 904 aa20.52■□□□□ 0.88
CACNA1A-227ENST00000636549 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.88
CACNA1A-227ENST00000636549 FYCO1Q9BQS8 1478 aa20.52■□□□□ 0.88
CACNA1A-227ENST00000636549 KIF5CO60282 957 aa20.52■□□□□ 0.88
CACNA1A-227ENST00000636549 LDHAL6AQ6ZMR3 332 aa20.52■□□□□ 0.88
CACNA1A-227ENST00000636549 IKBKGQ9Y6K9 419 aa20.52■□□□□ 0.87
CACNA1A-227ENST00000636549 SAP30BPQ9UHR5 308 aaKnown RBP20.51■□□□□ 0.87
CACNA1A-227ENST00000636549 ANKRD50Q9ULJ7 1429 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms