RNA–Protein interactions for RNA: ENST00000635721.1

SSRP1-205, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-205ENST00000635721 ZBTB7BO15156 539 aaPredicted RBP9.38□□□□□ -0.91
SSRP1-205ENST00000635721 GTF2F1P35269 517 aaKnown RBP eCLIP9.38□□□□□ -0.91
SSRP1-205ENST00000635721 PIGBQ92521 554 aa9.38□□□□□ -0.91
SSRP1-205ENST00000635721 GZF1Q9H116 711 aaPredicted RBP9.38□□□□□ -0.91
SSRP1-205ENST00000635721 LMBRD1Q9NUN5 540 aa9.38□□□□□ -0.91
SSRP1-205ENST00000635721 BTAF1O14981 1849 aa9.38□□□□□ -0.91
SSRP1-205ENST00000635721 BTBD11A6QL63 1104 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 ERVV-2B6SEH9 535 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 CDC45O75419 566 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 MBD3O95983 291 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 MCM2P49736 904 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 TEFQ10587 303 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 SASS6Q6UVJ0 657 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 TSPYL6Q8N831 410 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 SYTL4Q96C24 671 aaPredicted RBP9.37□□□□□ -0.91
SSRP1-205ENST00000635721 PRIMPOLQ96LW4 560 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 SMC4Q9NTJ3 1288 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 IFT57Q9NWB7 429 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 CCDC39Q9UFE4 941 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 ASAP1Q9ULH1 1129 aa9.37□□□□□ -0.91
SSRP1-205ENST00000635721 MRC1P22897 1456 aa9.36□□□□□ -0.91
SSRP1-205ENST00000635721 PAPPAQ13219 1627 aa9.36□□□□□ -0.91
SSRP1-205ENST00000635721 PRAMEF22A3QJZ6 481 aa9.36□□□□□ -0.91
SSRP1-205ENST00000635721 ELL2O00472 640 aaPredicted RBP9.36□□□□□ -0.91
SSRP1-205ENST00000635721 NCLP19338 710 aaKnown RBP9.36□□□□□ -0.91
SSRP1-205ENST00000635721 GNAI1P63096 354 aa9.36□□□□□ -0.91
SSRP1-205ENST00000635721 HMGN5P82970 282 aaKnown RBP9.36□□□□□ -0.91
SSRP1-205ENST00000635721 EXOSC9Q06265 439 aaKnown RBP9.36□□□□□ -0.91
SSRP1-205ENST00000635721 C8orf58Q8NAV2 365 aa9.36□□□□□ -0.91
SSRP1-205ENST00000635721 FAM184AQ8NB25 1140 aa9.36□□□□□ -0.91
SSRP1-205ENST00000635721 TSPYL4Q9UJ04 414 aa9.36□□□□□ -0.91
SSRP1-205ENST00000635721 DDX49Q9Y6V7 483 aaKnown RBP9.36□□□□□ -0.91
SSRP1-205ENST00000635721 NHSQ6T4R5 1651 aa9.36□□□□□ -0.91
SSRP1-205ENST00000635721 ABCC4O15439 1325 aa9.35□□□□□ -0.91
SSRP1-205ENST00000635721 EIF4A1P60842 406 aaKnown RBP9.35□□□□□ -0.91
SSRP1-205ENST00000635721 LRSAM1Q6UWE0 723 aa9.35□□□□□ -0.91
SSRP1-205ENST00000635721 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
SSRP1-205ENST00000635721 TMEM57Q8N5G2 664 aa9.35□□□□□ -0.91
SSRP1-205ENST00000635721 DCTPP1Q9H773 170 aa9.35□□□□□ -0.91
SSRP1-205ENST00000635721 ATG3Q9NT62 314 aa9.35□□□□□ -0.91
SSRP1-205ENST00000635721 TMOD3Q9NYL9 352 aa9.35□□□□□ -0.91
SSRP1-205ENST00000635721 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.35□□□□□ -0.91
SSRP1-205ENST00000635721 NOB1Q9ULX3 412 aaKnown RBP9.35□□□□□ -0.91
SSRP1-205ENST00000635721 TNNQ9UQP3 1299 aa9.35□□□□□ -0.91
SSRP1-205ENST00000635721 C5P01031 1676 aa9.35□□□□□ -0.91
SSRP1-205ENST00000635721 UBR2Q8IWV8 1755 aa9.35□□□□□ -0.91
SSRP1-205ENST00000635721 BCL9O00512 1426 aa9.34□□□□□ -0.91
SSRP1-205ENST00000635721 TRIM37O94972 964 aa9.34□□□□□ -0.91
SSRP1-205ENST00000635721 ZSCAN23Q3MJ62 389 aa9.34□□□□□ -0.91
SSRP1-205ENST00000635721 INTS4Q96HW7 963 aaKnown RBP9.34□□□□□ -0.91
SSRP1-205ENST00000635721 SLC4A9Q96Q91 983 aa9.34□□□□□ -0.91
SSRP1-205ENST00000635721 USP26Q9BXU7 913 aa9.34□□□□□ -0.91
SSRP1-205ENST00000635721 GTPBP4Q9BZE4 634 aaKnown RBP9.34□□□□□ -0.91
SSRP1-205ENST00000635721 KCPQ6ZWJ8 1503 aa9.33□□□□□ -0.92
SSRP1-205ENST00000635721 ADRA2BP18089 450 aa9.33□□□□□ -0.92
SSRP1-205ENST00000635721 KCNQ4P56696 695 aa9.33□□□□□ -0.92
SSRP1-205ENST00000635721 ZNF790Q6PG37 636 aa9.33□□□□□ -0.92
SSRP1-205ENST00000635721 FAM196AQ6ZSG2 479 aa9.33□□□□□ -0.92
SSRP1-205ENST00000635721 ITPRIPQ8IWB1 547 aa9.33□□□□□ -0.92
SSRP1-205ENST00000635721 ZNF496Q96IT1 587 aaPredicted RBP9.33□□□□□ -0.92
SSRP1-205ENST00000635721 OSBPL3Q9H4L5 887 aa9.33□□□□□ -0.92
SSRP1-205ENST00000635721 PTCD1O75127 700 aaKnown RBP9.32□□□□□ -0.92
SSRP1-205ENST00000635721 VAMP4O75379 141 aa9.32□□□□□ -0.92
SSRP1-205ENST00000635721 KIF20AO95235 890 aa9.32□□□□□ -0.92
SSRP1-205ENST00000635721 TPM3P06753 285 aa9.32□□□□□ -0.92
SSRP1-205ENST00000635721 SSFA2P28290 1259 aa9.32□□□□□ -0.92
SSRP1-205ENST00000635721 ANAPC15P60006 121 aa9.32□□□□□ -0.92
SSRP1-205ENST00000635721 CUL4AQ13619 759 aa9.32□□□□□ -0.92
SSRP1-205ENST00000635721 RPAP2Q8IXW5 612 aaPredicted RBP9.32□□□□□ -0.92
SSRP1-205ENST00000635721 MRPL50Q8N5N7 158 aaKnown RBP9.32□□□□□ -0.92
SSRP1-205ENST00000635721 MYRIPQ8NFW9 859 aa9.32□□□□□ -0.92
SSRP1-205ENST00000635721 NECTIN2Q92692 538 aa9.32□□□□□ -0.92
SSRP1-205ENST00000635721 RBM42Q9BTD8 480 aaKnown RBP9.32□□□□□ -0.92
SSRP1-205ENST00000635721 CCDC94Q9BW85 323 aaPredicted RBP9.32□□□□□ -0.92
SSRP1-205ENST00000635721 API5Q9BZZ5 524 aaKnown RBP9.32□□□□□ -0.92
SSRP1-205ENST00000635721 USP16Q9Y5T5 823 aa9.32□□□□□ -0.92
SSRP1-205ENST00000635721 LY75O60449 1722 aa9.31□□□□□ -0.92
SSRP1-205ENST00000635721 TJP1Q07157 1748 aa9.31□□□□□ -0.92
SSRP1-205ENST00000635721 TNS1Q9HBL0 1735 aaKnown RBP9.31□□□□□ -0.92
SSRP1-205ENST00000635721 ST18O60284 1047 aa9.31□□□□□ -0.92
SSRP1-205ENST00000635721 LETM1O95202 739 aaPredicted RBP9.31□□□□□ -0.92
SSRP1-205ENST00000635721 PDIA4P13667 645 aaKnown RBP9.31□□□□□ -0.92
SSRP1-205ENST00000635721 INTS3Q68E01 1043 aaKnown RBP9.31□□□□□ -0.92
SSRP1-205ENST00000635721 ILDR2Q71H61 639 aa9.31□□□□□ -0.92
SSRP1-205ENST00000635721 TMEM87AQ8NBN3 555 aa9.31□□□□□ -0.92
SSRP1-205ENST00000635721 SYAP1Q96A49 352 aaPredicted RBP9.31□□□□□ -0.92
SSRP1-205ENST00000635721 BCL11BQ9C0K0 894 aaPredicted RBP9.31□□□□□ -0.92
SSRP1-205ENST00000635721 SPTLC3Q9NUV7 552 aa9.31□□□□□ -0.92
SSRP1-205ENST00000635721 BABAM1Q9NWV8 329 aa9.31□□□□□ -0.92
SSRP1-205ENST00000635721 HEG1Q9ULI3 1381 aa9.31□□□□□ -0.92
SSRP1-205ENST00000635721 MYH14Q7Z406 1995 aaKnown RBP9.3□□□□□ -0.92
SSRP1-205ENST00000635721 GIGYF1O75420 1035 aaPredicted RBP9.3□□□□□ -0.92
SSRP1-205ENST00000635721 PHF14O94880 888 aa9.3□□□□□ -0.92
SSRP1-205ENST00000635721 REC8O95072 547 aa9.3□□□□□ -0.92
SSRP1-205ENST00000635721 EIF2S2P20042 333 aaKnown RBP9.3□□□□□ -0.92
SSRP1-205ENST00000635721 PIP4K2AP48426 406 aaPredicted RBP9.3□□□□□ -0.92
SSRP1-205ENST00000635721 FAM193AP78312 1265 aa9.3□□□□□ -0.92
SSRP1-205ENST00000635721 SYCP1Q15431 976 aa9.3□□□□□ -0.92
SSRP1-205ENST00000635721 TWISTNBQ3B726 338 aaPredicted RBP9.3□□□□□ -0.92
SSRP1-205ENST00000635721 TTC22Q5TAA0 569 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms