RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 ZIC5Q96T25 663 aa6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 CEP126Q9P2H0 1117 aa6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 GJA3Q9Y6H8 435 aa6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 MCM6Q14566 821 aa6.52□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 TMEM132AQ24JP5 1023 aa6.52□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 NBPF1Q3BBV0 1214 aa6.52□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 SAMD5Q5TGI4 173 aa6.52□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 WWC1Q8IX03 1113 aa6.52□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 TATP17735 454 aaPredicted RBP6.51□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 USP4Q13107 963 aa6.51□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 TRAPPC3LQ5T215 181 aa6.51□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 FMNL2Q96PY5 1086 aa6.51□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 RNF112Q9ULX5 631 aa6.51□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 NRG1Q02297 640 aaPredicted RBP6.5□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 TSGA10IPQ3SY00 556 aa6.5□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 TNFRSF25Q93038 417 aa6.5□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 LENG1Q96BZ8 264 aaPredicted RBP6.5□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 ZDHHC3Q9NYG2 299 aa6.5□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 TBC1D2BQ9UPU7 963 aa6.5□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 INHAP05111 366 aa6.49□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 SIRT1Q96EB6 747 aa6.49□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 SSBP4Q9BWG4 385 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 A0A0A0MRY4 1105 aa6.48□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 SCNN1DP51172 638 aa6.48□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 SMTNP53814 917 aa6.48□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 GDF10P55107 478 aa6.48□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 C20orf204Q6ZNR8 217 aa6.48□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 ZNF295-AS1Q8N0V1 137 aa6.48□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 IRF5Q13568 498 aa6.47□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 BICDL1Q6ZP65 573 aa6.47□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 SLC30A3Q99726 388 aa6.47□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 DOLKQ9UPQ8 538 aa6.47□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 ARID1BQ8NFD5 2236 aaPredicted RBP6.47□□□□□ -1.37
NPHP3-ACAD11-202ENST00000632629 RAD21O60216 631 aa6.46□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 ADH7P40394 386 aa6.46□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 MAP7D1Q3KQU3 841 aa6.46□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 PCMTD2Q9NV79 361 aa6.46□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 CHIC2Q9UKJ5 165 aa6.46□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 LZTS3O60299 673 aaPredicted RBP6.45□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 LILRB5O75023 590 aa6.45□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 FZD5Q13467 585 aa6.45□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 SLFNL1Q499Z3 407 aa6.45□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 CABP1Q9NZU7 370 aa6.45□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 USP21Q9UK80 565 aa6.45□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 IQSEC3Q9UPP2 1182 aaPredicted RBP6.45□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 CDK2AP1O14519 115 aa6.44□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 RAC1P63000 192 aa6.44□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 OXLD1Q5BKU9 147 aa6.44□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 PHTF2Q8N3S3 785 aa6.44□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 GDPD2Q9HCC8 539 aa6.44□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 SERTAD1Q9UHV2 236 aa6.44□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 COG6Q9Y2V7 657 aa6.44□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 USP3Q9Y6I4 520 aa6.44□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 ABL2P42684 1182 aa6.43□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 IRAK1P51617 712 aa6.43□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 SFSWAPQ12872 951 aaKnown RBP6.43□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 PARP3Q9Y6F1 533 aa6.43□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 A6NJY4 79 aa6.42□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 TXLNAP40222 546 aa6.42□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 SEMA3FQ13275 785 aa6.42□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 MTFR1Q15390 333 aa6.42□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 LRRC69Q6ZNQ3 347 aa6.42□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 NFATC2IPQ8NCF5 419 aa6.42□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 SLC4A9Q96Q91 983 aa6.42□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 UBTFP17480 764 aaKnown RBP6.41□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 SPEM2Q0P670 501 aa6.41□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 NEUROD1Q13562 356 aa6.41□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 RAB44Q7Z6P3 723 aaPredicted RBP6.41□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 TAL1P17542 331 aaPredicted RBP6.4□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 SSTR4P31391 388 aa6.4□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 VAC14Q08AM6 782 aa6.4□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 FMR1NBQ8N0W7 255 aaPredicted RBP6.4□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 RNF114Q9Y508 228 aa6.4□□□□□ -1.38
NPHP3-ACAD11-202ENST00000632629 TMEM229AB2RXF0 380 aa6.39□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 WFDC12Q8WWY7 111 aa6.39□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 NEUROD4Q9HD90 331 aa6.39□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 DMRTC2Q8IXT2 367 aaPredicted RBP6.38□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 JPH1Q9HDC5 661 aaPredicted RBP6.38□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 IREB2P48200 963 aaKnown RBP6.37□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 PRR23CQ6ZRP0 262 aa6.37□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 ILDR2Q71H61 639 aa6.37□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 PLPP7Q8NBV4 271 aa6.37□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 NUDT8Q8WV74 236 aa6.37□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 C7orf43Q8WVR3 580 aa6.37□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 ALG2Q9H553 416 aa6.37□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 EML1O00423 815 aa6.36□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 NOS3P29474 1203 aa6.36□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 CD97P48960 835 aa6.36□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 AFF1P51825 1210 aaKnown RBP6.36□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 SLC51AQ86UW1 340 aa6.36□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 ZDHHC1Q8WTX9 485 aa6.36□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 L3MBTL2Q969R5 705 aa6.36□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 OAS3Q9Y6K5 1087 aaKnown RBP6.36□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 TBC1D8BQ0IIM8 1120 aa6.35□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 EML3Q32P44 896 aa6.35□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 MEGF10Q96KG7 1140 aa6.35□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 KRTAP4-2Q9BYR5 136 aa6.35□□□□□ -1.39
NPHP3-ACAD11-202ENST00000632629 SLC6A14Q9UN76 642 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms