RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 KDM6AO15550 1401 aaPredicted RBP10.51□□□□□ -0.73
TCF4-260ENST00000627685 TUBGCP6Q96RT7 1819 aa10.5□□□□□ -0.73
TCF4-260ENST00000627685 AEBP1Q8IUX7 1158 aa10.5□□□□□ -0.73
TCF4-260ENST00000627685 WNT2BQ93097 391 aa10.5□□□□□ -0.73
TCF4-260ENST00000627685 PDGFDQ9GZP0 370 aaPredicted RBP10.5□□□□□ -0.73
TCF4-260ENST00000627685 LRRC4BQ9NT99 713 aa10.5□□□□□ -0.73
TCF4-260ENST00000627685 COL24A1Q17RW2 1714 aa10.5□□□□□ -0.73
TCF4-260ENST00000627685 IL13P35225 146 aa10.49□□□□□ -0.73
TCF4-260ENST00000627685 TNNT2P45379 298 aaPredicted RBP10.49□□□□□ -0.73
TCF4-260ENST00000627685 RBM26Q5T8P6 1007 aaKnown RBP10.49□□□□□ -0.73
TCF4-260ENST00000627685 LAPTM4BQ86VI4 370 aa10.49□□□□□ -0.73
TCF4-260ENST00000627685 ACSBG1Q96GR2 724 aa10.49□□□□□ -0.73
TCF4-260ENST00000627685 FAM198AQ9UFP1 575 aa10.49□□□□□ -0.73
TCF4-260ENST00000627685 CICQ96RK0 1608 aaPredicted RBP10.48□□□□□ -0.73
TCF4-260ENST00000627685 QSER1Q2KHR3 1735 aa10.48□□□□□ -0.73
TCF4-260ENST00000627685 PTPN5P54829 565 aa10.48□□□□□ -0.73
TCF4-260ENST00000627685 R3HDM1Q15032 1099 aaKnown RBP10.48□□□□□ -0.73
TCF4-260ENST00000627685 ZCRB1Q8TBF4 217 aaKnown RBP10.48□□□□□ -0.73
TCF4-260ENST00000627685 HCSTQ9UBK5 93 aa10.48□□□□□ -0.73
TCF4-260ENST00000627685 MRC1P22897 1456 aa10.48□□□□□ -0.73
TCF4-260ENST00000627685 SMAPO00193 183 aa10.47□□□□□ -0.73
TCF4-260ENST00000627685 PTGDRQ13258 359 aa10.47□□□□□ -0.73
TCF4-260ENST00000627685 TXNRD1Q16881 649 aa10.47□□□□□ -0.73
TCF4-260ENST00000627685 ZNF827Q17R98 1081 aa10.47□□□□□ -0.73
TCF4-260ENST00000627685 PADI6Q6TGC4 694 aa10.47□□□□□ -0.73
TCF4-260ENST00000627685 ITGB4P16144 1822 aa10.47□□□□□ -0.73
TCF4-260ENST00000627685 NBPF14Q5TI25 921 aa10.46□□□□□ -0.73
TCF4-260ENST00000627685 ANKK1Q8NFD2 765 aa10.46□□□□□ -0.73
TCF4-260ENST00000627685 DDX54Q8TDD1 881 aaKnown RBP10.46□□□□□ -0.73
TCF4-260ENST00000627685 ZFRQ96KR1 1074 aaKnown RBP10.46□□□□□ -0.73
TCF4-260ENST00000627685 PNMA3Q9UL41 463 aa10.46□□□□□ -0.73
TCF4-260ENST00000627685 PCDH11XQ9BZA7 1347 aa10.46□□□□□ -0.73
TCF4-260ENST00000627685 PCDH11YQ9BZA8 1340 aa10.46□□□□□ -0.73
TCF4-260ENST00000627685 C5P01031 1676 aa10.45□□□□□ -0.74
TCF4-260ENST00000627685 NBPF26B4DH59 902 aa10.45□□□□□ -0.74
TCF4-260ENST00000627685 THSD4Q6ZMP0 1018 aa10.45□□□□□ -0.74
TCF4-260ENST00000627685 MORC1Q86VD1 984 aa10.45□□□□□ -0.74
TCF4-260ENST00000627685 TATDN2Q93075 761 aa10.45□□□□□ -0.74
TCF4-260ENST00000627685 RBM27Q9P2N5 1060 aaKnown RBP10.45□□□□□ -0.74
TCF4-260ENST00000627685 KNSTRNQ9Y448 316 aa10.45□□□□□ -0.74
TCF4-260ENST00000627685 ZNF831Q5JPB2 1677 aa10.44□□□□□ -0.74
TCF4-260ENST00000627685 C3orf80F5H4A9 247 aa10.44□□□□□ -0.74
TCF4-260ENST00000627685 PPM1GO15355 546 aaPredicted RBP10.44□□□□□ -0.74
TCF4-260ENST00000627685 PHKG2P15735 406 aa10.44□□□□□ -0.74
TCF4-260ENST00000627685 TATP17735 454 aaPredicted RBP10.44□□□□□ -0.74
TCF4-260ENST00000627685 MTHFSP49914 203 aa10.44□□□□□ -0.74
TCF4-260ENST00000627685 CC2D1BQ5T0F9 858 aaKnown RBP10.44□□□□□ -0.74
TCF4-260ENST00000627685 AMIGO3Q86WK7 504 aa10.44□□□□□ -0.74
TCF4-260ENST00000627685 RAPGEF4Q8WZA2 1011 aa10.44□□□□□ -0.74
TCF4-260ENST00000627685 FCHSD2O94868 740 aa10.43□□□□□ -0.74
TCF4-260ENST00000627685 KCNQ4P56696 695 aa10.43□□□□□ -0.74
TCF4-260ENST00000627685 NUDT18Q6ZVK8 323 aa10.43□□□□□ -0.74
TCF4-260ENST00000627685 TAF1LQ8IZX4 1826 aa10.42□□□□□ -0.74
TCF4-260ENST00000627685 TJP1Q07157 1748 aa10.42□□□□□ -0.74
TCF4-260ENST00000627685 C4BP0C0L5 1744 aa10.41□□□□□ -0.74
TCF4-260ENST00000627685 COL5A3P25940 1745 aaPredicted RBP10.41□□□□□ -0.74
TCF4-260ENST00000627685 PALLDQ8WX93 1383 aa10.41□□□□□ -0.74
TCF4-260ENST00000627685 TULP1O00294 542 aaPredicted RBP10.41□□□□□ -0.74
TCF4-260ENST00000627685 BCAMP50895 628 aa10.41□□□□□ -0.74
TCF4-260ENST00000627685 SLC15A2Q16348 729 aa10.41□□□□□ -0.74
TCF4-260ENST00000627685 TTC13Q8NBP0 860 aa10.41□□□□□ -0.74
TCF4-260ENST00000627685 SLC4A9Q96Q91 983 aa10.41□□□□□ -0.74
TCF4-260ENST00000627685 KCPQ6ZWJ8 1503 aa10.41□□□□□ -0.74
TCF4-260ENST00000627685 PNPLA7Q6ZV29 1317 aa10.4□□□□□ -0.74
TCF4-260ENST00000627685 SCN11AQ9UI33 1791 aa10.4□□□□□ -0.74
TCF4-260ENST00000627685 PIGBQ92521 554 aa10.4□□□□□ -0.74
TCF4-260ENST00000627685 SIPA1L3O60292 1781 aaPredicted RBP10.39□□□□□ -0.75
TCF4-260ENST00000627685 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
TCF4-260ENST00000627685 PPP2R1AP30153 589 aa10.39□□□□□ -0.75
TCF4-260ENST00000627685 SULT6B1Q6IMI4 303 aa10.39□□□□□ -0.75
TCF4-260ENST00000627685 UBR2Q8IWV8 1755 aa10.39□□□□□ -0.75
TCF4-260ENST00000627685 UBR3Q6ZT12 1888 aa10.38□□□□□ -0.75
TCF4-260ENST00000627685 ITPK1Q13572 414 aa10.38□□□□□ -0.75
TCF4-260ENST00000627685 SLC27A3Q5K4L6 730 aa10.38□□□□□ -0.75
TCF4-260ENST00000627685 LRCH3Q96II8 777 aa10.38□□□□□ -0.75
TCF4-260ENST00000627685 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.38□□□□□ -0.75
TCF4-260ENST00000627685 IFNL2Q8IZJ0 200 aa10.37□□□□□ -0.75
TCF4-260ENST00000627685 SPON1Q9HCB6 807 aa10.37□□□□□ -0.75
TCF4-260ENST00000627685 ATG3Q9NT62 314 aa10.37□□□□□ -0.75
TCF4-260ENST00000627685 ASAP1Q9ULH1 1129 aa10.37□□□□□ -0.75
TCF4-260ENST00000627685 SPG7Q9UQ90 795 aa10.37□□□□□ -0.75
TCF4-260ENST00000627685 HMOX1P09601 288 aa10.36□□□□□ -0.75
TCF4-260ENST00000627685 HIC1Q14526 733 aa10.36□□□□□ -0.75
TCF4-260ENST00000627685 FAM161AQ3B820 660 aa10.36□□□□□ -0.75
TCF4-260ENST00000627685 SAMD7Q7Z3H4 446 aa10.36□□□□□ -0.75
TCF4-260ENST00000627685 GPIHBP1Q8IV16 184 aa10.36□□□□□ -0.75
TCF4-260ENST00000627685 LINC00116Q8NCU8 138 aa10.36□□□□□ -0.75
TCF4-260ENST00000627685 SYTL4Q96C24 671 aaPredicted RBP10.36□□□□□ -0.75
TCF4-260ENST00000627685 RSPH6AQ9H0K4 717 aa10.36□□□□□ -0.75
TCF4-260ENST00000627685 STK32BQ9NY57 414 aa10.36□□□□□ -0.75
TCF4-260ENST00000627685 DIAPH1O60610 1272 aaKnown RBP10.35□□□□□ -0.75
TCF4-260ENST00000627685 MTHFSDQ2M296 383 aaKnown RBP10.35□□□□□ -0.75
TCF4-260ENST00000627685 ZNF530Q6P9A1 599 aaPredicted RBP10.35□□□□□ -0.75
TCF4-260ENST00000627685 MPRIPQ6WCQ1 1025 aa10.35□□□□□ -0.75
TCF4-260ENST00000627685 SMIM5Q71RC9 77 aa10.35□□□□□ -0.75
TCF4-260ENST00000627685 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
TCF4-260ENST00000627685 C4AP0C0L4 1744 aa10.35□□□□□ -0.75
TCF4-260ENST00000627685 ZBTB7AO95365 584 aa10.34□□□□□ -0.75
TCF4-260ENST00000627685 HMGB2P26583 209 aaKnown RBP10.34□□□□□ -0.75
TCF4-260ENST00000627685 DCAF5Q96JK2 942 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms