RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 CENPQQ7L2Z9 268 aaPredicted RBP14.51□□□□□ -0.09
LINC00538-201ENST00000626109 MCM10Q7L590 875 aa14.51□□□□□ -0.09
LINC00538-201ENST00000626109 KRT27Q7Z3Y8 459 aa14.51□□□□□ -0.09
LINC00538-201ENST00000626109 CHMP4BQ9H444 224 aaKnown RBP14.51□□□□□ -0.09
LINC00538-201ENST00000626109 RNMTO43148 476 aaKnown RBP14.5□□□□□ -0.09
LINC00538-201ENST00000626109 FAM193AP78312 1265 aa14.5□□□□□ -0.09
LINC00538-201ENST00000626109 CALD1Q05682 793 aaKnown RBP14.5□□□□□ -0.09
LINC00538-201ENST00000626109 DCTN1Q14203 1278 aa14.5□□□□□ -0.09
LINC00538-201ENST00000626109 RBM26Q5T8P6 1007 aaKnown RBP14.5□□□□□ -0.09
LINC00538-201ENST00000626109 NME8Q8N427 588 aa14.5□□□□□ -0.09
LINC00538-201ENST00000626109 EVI5LQ96CN4 794 aa14.5□□□□□ -0.09
LINC00538-201ENST00000626109 KDM6AO15550 1401 aaPredicted RBP14.5□□□□□ -0.09
LINC00538-201ENST00000626109 KCNA1Q09470 495 aa14.49□□□□□ -0.09
LINC00538-201ENST00000626109 RTL5Q5HYW3 569 aaPredicted RBP14.49□□□□□ -0.09
LINC00538-201ENST00000626109 IL17REQ8NFR9 667 aa14.49□□□□□ -0.09
LINC00538-201ENST00000626109 THUMPD2Q9BTF0 503 aaKnown RBP14.49□□□□□ -0.09
LINC00538-201ENST00000626109 LGR6Q9HBX8 967 aa14.49□□□□□ -0.09
LINC00538-201ENST00000626109 CEMIPQ8WUJ3 1361 aa14.48□□□□□ -0.09
LINC00538-201ENST00000626109 ADAMTS7Q9UKP4 1686 aa14.48□□□□□ -0.09
LINC00538-201ENST00000626109 TEFQ10587 303 aa14.48□□□□□ -0.09
LINC00538-201ENST00000626109 TRMT2AQ8IZ69 625 aaKnown RBP14.48□□□□□ -0.09
LINC00538-201ENST00000626109 DDRGK1Q96HY6 314 aa14.48□□□□□ -0.09
LINC00538-201ENST00000626109 BRWD3Q6RI45 1802 aa14.47□□□□□ -0.09
LINC00538-201ENST00000626109 SCN11AQ9UI33 1791 aa14.47□□□□□ -0.09
LINC00538-201ENST00000626109 PATL2C9JE40 543 aaKnown RBP14.47□□□□□ -0.09
LINC00538-201ENST00000626109 MCM6Q14566 821 aa14.47□□□□□ -0.09
LINC00538-201ENST00000626109 TRIM66O15016 1216 aa14.47□□□□□ -0.09
LINC00538-201ENST00000626109 WDR63Q8IWG1 891 aa14.47□□□□□ -0.09
LINC00538-201ENST00000626109 KRI1Q8N9T8 703 aaKnown RBP14.47□□□□□ -0.09
LINC00538-201ENST00000626109 PLSCR2Q9NRY7 297 aa14.47□□□□□ -0.09
LINC00538-201ENST00000626109 IVNS1ABPQ9Y6Y0 642 aa14.47□□□□□ -0.09
LINC00538-201ENST00000626109 BCL9O00512 1426 aa14.46□□□□□ -0.09
LINC00538-201ENST00000626109 CARNS1A5YM72 827 aa14.46□□□□□ -0.09
LINC00538-201ENST00000626109 ERVV-2B6SEH9 535 aa14.46□□□□□ -0.09
LINC00538-201ENST00000626109 CABP4P57796 275 aa14.46□□□□□ -0.09
LINC00538-201ENST00000626109 MRC1P22897 1456 aa14.46□□□□□ -0.1
LINC00538-201ENST00000626109 FAM182BQ5T319 152 aa14.45□□□□□ -0.1
LINC00538-201ENST00000626109 SND1Q7KZF4 910 aaKnown RBP eCLIP14.45□□□□□ -0.1
LINC00538-201ENST00000626109 SLC52A2Q9HAB3 445 aa14.45□□□□□ -0.1
LINC00538-201ENST00000626109 DOT1LQ8TEK3 1739 aa14.45□□□□□ -0.1
LINC00538-201ENST00000626109 TOGARAM1Q9Y4F4 1720 aa14.45□□□□□ -0.1
LINC00538-201ENST00000626109 IL16Q14005 1332 aa14.45□□□□□ -0.1
LINC00538-201ENST00000626109 RBM47A0AV96 593 aaKnown RBP14.45□□□□□ -0.1
LINC00538-201ENST00000626109 MAP4K4O95819 1239 aaPredicted RBP14.45□□□□□ -0.1
LINC00538-201ENST00000626109 FAM196AQ6ZSG2 479 aa14.45□□□□□ -0.1
LINC00538-201ENST00000626109 VIRMAQ69YN4 1812 aaKnown RBP14.44□□□□□ -0.1
LINC00538-201ENST00000626109 SYTL4Q96C24 671 aaPredicted RBP14.44□□□□□ -0.1
LINC00538-201ENST00000626109 ACSBG1Q96GR2 724 aa14.44□□□□□ -0.1
LINC00538-201ENST00000626109 TMOD3Q9NYL9 352 aa14.44□□□□□ -0.1
LINC00538-201ENST00000626109 KDM2BQ8NHM5 1336 aa14.44□□□□□ -0.1
LINC00538-201ENST00000626109 TAF7Q15545 349 aaPredicted RBP14.43□□□□□ -0.1
LINC00538-201ENST00000626109 C20orf194Q5TEA3 1177 aa14.43□□□□□ -0.1
LINC00538-201ENST00000626109 IFT57Q9NWB7 429 aa14.43□□□□□ -0.1
LINC00538-201ENST00000626109 PRIM1P49642 420 aaKnown RBP14.43□□□□□ -0.1
LINC00538-201ENST00000626109 GNAI1P63096 354 aa14.43□□□□□ -0.1
LINC00538-201ENST00000626109 NFATC2IPQ8NCF5 419 aa14.43□□□□□ -0.1
LINC00538-201ENST00000626109 BTBD11A6QL63 1104 aa14.41□□□□□ -0.1
LINC00538-201ENST00000626109 FOXD4Q12950 439 aaPredicted RBP14.41□□□□□ -0.1
LINC00538-201ENST00000626109 BABAM1Q9NWV8 329 aa14.41□□□□□ -0.1
LINC00538-201ENST00000626109 NHSQ6T4R5 1651 aa14.41□□□□□ -0.1
LINC00538-201ENST00000626109 SIPA1L3O60292 1781 aaPredicted RBP14.41□□□□□ -0.1
LINC00538-201ENST00000626109 TSPYL4Q9UJ04 414 aa14.41□□□□□ -0.1
LINC00538-201ENST00000626109 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
LINC00538-201ENST00000626109 STK24Q9Y6E0 443 aa14.4□□□□□ -0.1
LINC00538-201ENST00000626109 ITGB4P16144 1822 aa14.4□□□□□ -0.1
LINC00538-201ENST00000626109 CHL1O00533 1208 aa14.39□□□□□ -0.11
LINC00538-201ENST00000626109 ZNF853P0CG23 659 aa14.39□□□□□ -0.11
LINC00538-201ENST00000626109 PDE3AQ14432 1141 aa14.39□□□□□ -0.11
LINC00538-201ENST00000626109 TSR1Q2NL82 804 aaKnown RBP14.39□□□□□ -0.11
LINC00538-201ENST00000626109 PIGBQ92521 554 aa14.39□□□□□ -0.11
LINC00538-201ENST00000626109 KCNQ2O43526 872 aa14.39□□□□□ -0.11
LINC00538-201ENST00000626109 FAM161AQ3B820 660 aa14.39□□□□□ -0.11
LINC00538-201ENST00000626109 TTC5Q8N0Z6 440 aa14.39□□□□□ -0.11
LINC00538-201ENST00000626109 MIS18AQ9NYP9 233 aa14.39□□□□□ -0.11
LINC00538-201ENST00000626109 KLHL42Q9P2K6 505 aa14.39□□□□□ -0.11
LINC00538-201ENST00000626109 ARHGEF1Q92888 912 aaKnown RBP14.38□□□□□ -0.11
LINC00538-201ENST00000626109 VTI1AQ96AJ9 217 aa14.38□□□□□ -0.11
LINC00538-201ENST00000626109 MBIPQ9NS73 344 aa14.38□□□□□ -0.11
LINC00538-201ENST00000626109 ZNF790Q6PG37 636 aa14.37□□□□□ -0.11
LINC00538-201ENST00000626109 MORC4Q8TE76 937 aa14.37□□□□□ -0.11
LINC00538-201ENST00000626109 TSR2Q969E8 191 aaKnown RBP14.37□□□□□ -0.11
LINC00538-201ENST00000626109 SBF2Q86WG5 1849 aa14.37□□□□□ -0.11
LINC00538-201ENST00000626109 TCF3P15923 654 aa14.37□□□□□ -0.11
LINC00538-201ENST00000626109 SLC39A6Q13433 755 aa14.37□□□□□ -0.11
LINC00538-201ENST00000626109 PAPPAQ13219 1627 aa14.36□□□□□ -0.11
LINC00538-201ENST00000626109 KDM3BQ7LBC6 1761 aa14.36□□□□□ -0.11
LINC00538-201ENST00000626109 PPFIA4O75335 1185 aa14.36□□□□□ -0.11
LINC00538-201ENST00000626109 TRIM37O94972 964 aa14.36□□□□□ -0.11
LINC00538-201ENST00000626109 SKIV2LQ15477 1246 aaKnown RBP14.36□□□□□ -0.11
LINC00538-201ENST00000626109 SMARCC1Q92922 1105 aaPredicted RBP14.36□□□□□ -0.11
LINC00538-201ENST00000626109 KAT6BQ8WYB5 2073 aa14.36□□□□□ -0.11
LINC00538-201ENST00000626109 STK25O00506 426 aa14.35□□□□□ -0.11
LINC00538-201ENST00000626109 ATG3Q9NT62 314 aa14.35□□□□□ -0.11
LINC00538-201ENST00000626109 ASAP1Q9ULH1 1129 aa14.35□□□□□ -0.11
LINC00538-201ENST00000626109 BTAF1O14981 1849 aa14.34□□□□□ -0.11
LINC00538-201ENST00000626109 KCNQ3O43525 872 aa14.34□□□□□ -0.11
LINC00538-201ENST00000626109 PTF1AQ7RTS3 328 aa14.34□□□□□ -0.11
LINC00538-201ENST00000626109 UBXN4Q92575 508 aa14.34□□□□□ -0.11
LINC00538-201ENST00000626109 PALLDQ8WX93 1383 aa14.33□□□□□ -0.11
LINC00538-201ENST00000626109 BCAR3O75815 825 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms