RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 NAIF1Q69YI7 327 aaPredicted RBP6.07□□□□□ -1.44
CHD2-204ENST00000625463 TTC19Q6DKK2 380 aaPredicted RBP6.07□□□□□ -1.44
CHD2-204ENST00000625463 BARGINQ6ZT62 677 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 C3orf67Q6ZVT6 689 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 PHC3Q8NDX5 983 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 VPS37AQ8NEZ2 397 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 HDAC7Q8WUI4 952 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 TCP11Q8WWU5 503 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 CCDC47Q96A33 483 aaKnown RBP6.07□□□□□ -1.44
CHD2-204ENST00000625463 FAXDC2Q96IV6 333 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 PLEKHG4BQ96PX9 1271 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 SLKQ9H2G2 1235 aaPredicted RBP6.07□□□□□ -1.44
CHD2-204ENST00000625463 A1CFQ9NQ94 594 aaKnown RBP6.07□□□□□ -1.44
CHD2-204ENST00000625463 FAM53CQ9NYF3 392 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.07□□□□□ -1.44
CHD2-204ENST00000625463 FBXO9Q9UK97 447 aaPredicted RBP6.07□□□□□ -1.44
CHD2-204ENST00000625463 RABL2BQ9UNT1 228 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 NUDCQ9Y266 331 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 AMOTL2Q9Y2J4 779 aa6.07□□□□□ -1.44
CHD2-204ENST00000625463 V9GYY5 206 aaPredicted RBP6.07□□□□□ -1.44
CHD2-204ENST00000625463 NPC1L1Q9UHC9 1359 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 RAB11FIP3O75154 756 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 U2AF1L5P0DN76 240 aaPredicted RBP6.06□□□□□ -1.44
CHD2-204ENST00000625463 GCFC2P16383 781 aaKnown RBP6.06□□□□□ -1.44
CHD2-204ENST00000625463 XBP1P17861 261 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 GJA8P48165 433 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 GYS2P54840 703 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 U2AF1Q01081 240 aaKnown RBP eCLIP6.06□□□□□ -1.44
CHD2-204ENST00000625463 DEUP1Q05D60 604 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 PRPF4BQ13523 1007 aaKnown RBP6.06□□□□□ -1.44
CHD2-204ENST00000625463 E2F5Q15329 346 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 TBC1D25Q3MII6 688 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 CCDC70Q6NSX1 233 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 SYT10Q6XYQ8 523 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 CCDC80Q76M96 950 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 SDCCAG8Q86SQ7 713 aaPredicted RBP6.06□□□□□ -1.44
CHD2-204ENST00000625463 TRIM42Q8IWZ5 723 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 ELOA2Q8IYF1 753 aaPredicted RBP6.06□□□□□ -1.44
CHD2-204ENST00000625463 IQUBQ8NA54 791 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 GOLGA5Q8TBA6 731 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 BICD1Q96G01 975 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 SENP7Q9BQF6 1050 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 TRIM6Q9C030 488 aaPredicted RBP6.06□□□□□ -1.44
CHD2-204ENST00000625463 FAM107BQ9H098 131 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 ANTXR1Q9H6X2 564 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 INCENPQ9NQS7 918 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 ATG3Q9NT62 314 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.06□□□□□ -1.44
CHD2-204ENST00000625463 SWAP70Q9UH65 585 aa6.06□□□□□ -1.44
CHD2-204ENST00000625463 IQSEC3Q9UPP2 1182 aaPredicted RBP6.06□□□□□ -1.44
CHD2-204ENST00000625463 SOS1Q07889 1333 aaPredicted RBP6.05□□□□□ -1.44
CHD2-204ENST00000625463 GPR37O15354 613 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 SASH1O94885 1247 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 ATICP31939 592 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 PRIM1P49642 420 aaKnown RBP6.05□□□□□ -1.44
CHD2-204ENST00000625463 CDR1P51861 262 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 MNAT1P51948 309 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 FOSBP53539 338 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 LARP1BQ659C4 914 aaKnown RBP6.05□□□□□ -1.44
CHD2-204ENST00000625463 SYNE3Q6ZMZ3 975 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 ANKRD18AQ8IVF6 992 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 STAG2Q8N3U4 1231 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 PDILTQ8N807 584 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 CCDC191Q8NCU4 936 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 PMFBP1Q8TBY8 1022 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 DDX12PQ92771 950 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 SPOCK3Q9BQ16 436 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 ATP1B4Q9UN42 357 aaPredicted RBP6.05□□□□□ -1.44
CHD2-204ENST00000625463 ATP8A1Q9Y2Q0 1164 aa6.05□□□□□ -1.44
CHD2-204ENST00000625463 RRP15Q9Y3B9 282 aaKnown RBP6.05□□□□□ -1.44
CHD2-204ENST00000625463 RSF1Q96T23 1441 aaPredicted RBP6.05□□□□□ -1.44
CHD2-204ENST00000625463 CFAP69A5D8W1 941 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 F8VZ95 297 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 U2SURPO15042 1029 aaKnown RBP6.04□□□□□ -1.44
CHD2-204ENST00000625463 NPHP1O15259 732 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 EVI5O60447 810 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 CCDC159P0C7I6 412 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 HARSP12081 509 aaKnown RBP6.04□□□□□ -1.44
CHD2-204ENST00000625463 FOSL1P15407 271 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 PECAM1P16284 738 aaPredicted RBP6.04□□□□□ -1.44
CHD2-204ENST00000625463 OSBPP22059 807 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 TPP2P29144 1249 aaPredicted RBP6.04□□□□□ -1.44
CHD2-204ENST00000625463 NEDD9Q14511 834 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 KRT72Q14CN4 511 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 UBE2Q1Q7Z7E8 422 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 KIAA1328Q86T90 577 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 ERC1Q8IUD2 1116 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 FAM114A1Q8IWE2 563 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 CCDC65Q8IXS2 484 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 ZNF397Q8NF99 534 aaPredicted RBP6.04□□□□□ -1.44
CHD2-204ENST00000625463 FBXO18Q8NFZ0 1043 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 KIF18AQ8NI77 898 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 ZNF483Q8TF39 744 aaPredicted RBP6.04□□□□□ -1.44
CHD2-204ENST00000625463 PIBF1Q8WXW3 757 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 SEZ6LQ9BYH1 1024 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 HOMER3Q9NSC5 361 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 ZNF446Q9NWS9 450 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 ODF2LQ9ULJ1 636 aa6.04□□□□□ -1.44
CHD2-204ENST00000625463 BARX2Q9UMQ3 279 aaPredicted RBP6.04□□□□□ -1.44
CHD2-204ENST00000625463 KDRP35968 1356 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms