RNA–Protein interactions for RNA: ENST00000619186.4

TP53-224, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-224	ENST00000619186	ERBB4	Q15303	1308 aa		13.25	□□□□□ -0.29
TP53-224	ENST00000619186	GPT2	Q8TD30	523 aa		13.24	□□□□□ -0.29
TP53-224	ENST00000619186	LARP6	Q9BRS8	491 aa	Known RBP	13.24	□□□□□ -0.29
TP53-224	ENST00000619186	RBM27	Q9P2N5	1060 aa	Known RBP	13.24	□□□□□ -0.29
TP53-224	ENST00000619186	MAP3K2	Q9Y2U5	619 aa		13.24	□□□□□ -0.29
TP53-224	ENST00000619186	GIGYF1	O75420	1035 aa	Predicted RBP	13.23	□□□□□ -0.29
TP53-224	ENST00000619186	KLHL40	Q2TBA0	621 aa		13.23	□□□□□ -0.29
TP53-224	ENST00000619186	PRPF40A	O75400	957 aa	Known RBP	13.23	□□□□□ -0.29
TP53-224	ENST00000619186	SLC39A6	Q13433	755 aa		13.23	□□□□□ -0.29
TP53-224	ENST00000619186	CAVIN1	Q6NZI2	390 aa	Known RBP	13.23	□□□□□ -0.29
TP53-224	ENST00000619186	NUCB2	P80303	420 aa		13.22	□□□□□ -0.29
TP53-224	ENST00000619186	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.22	□□□□□ -0.29
TP53-224	ENST00000619186	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.22	□□□□□ -0.29
TP53-224	ENST00000619186	COL18A1	P39060	1754 aa		13.22	□□□□□ -0.29
TP53-224	ENST00000619186	NCL	P19338	710 aa	Known RBP	13.22	□□□□□ -0.29
TP53-224	ENST00000619186	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.22	□□□□□ -0.29
TP53-224	ENST00000619186	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.22	□□□□□ -0.29
TP53-224	ENST00000619186	RASEF	Q8IZ41	740 aa		13.22	□□□□□ -0.29
TP53-224	ENST00000619186	KAZALD1	Q96I82	304 aa		13.22	□□□□□ -0.29
TP53-224	ENST00000619186	CRYBG1	Q9Y4K1	1723 aa		13.21	□□□□□ -0.29
TP53-224	ENST00000619186	CSB-PGBD3	P0DP91	1061 aa		13.21	□□□□□ -0.29
TP53-224	ENST00000619186	PIP4K2A	P48426	406 aa	Predicted RBP	13.21	□□□□□ -0.29
TP53-224	ENST00000619186	ZMYND15	Q9H091	742 aa		13.21	□□□□□ -0.29
TP53-224	ENST00000619186	SOS2	Q07890	1332 aa	Predicted RBP	13.21	□□□□□ -0.3
TP53-224	ENST00000619186	HEG1	Q9ULI3	1381 aa		13.21	□□□□□ -0.3
TP53-224	ENST00000619186	CPA1	P15085	419 aa		13.2	□□□□□ -0.3
TP53-224	ENST00000619186	AIMP1	Q12904	312 aa	Known RBP	13.2	□□□□□ -0.3
TP53-224	ENST00000619186	COL9A3	Q14050	684 aa	Predicted RBP	13.2	□□□□□ -0.3
TP53-224	ENST00000619186	CWC27	Q6UX04	472 aa	Known RBP	13.2	□□□□□ -0.3
TP53-224	ENST00000619186	SPG7	Q9UQ90	795 aa		13.2	□□□□□ -0.3
TP53-224	ENST00000619186	NCAPD2	Q15021	1401 aa		13.2	□□□□□ -0.3
TP53-224	ENST00000619186	HOXB7	P09629	217 aa		13.2	□□□□□ -0.3
TP53-224	ENST00000619186	PDIA6	Q15084	440 aa		13.2	□□□□□ -0.3
TP53-224	ENST00000619186	C1orf141	Q5JVX7	400 aa		13.2	□□□□□ -0.3
TP53-224	ENST00000619186	KIF1BP	Q96EK5	621 aa		13.2	□□□□□ -0.3
TP53-224	ENST00000619186	CWC22	Q9HCG8	908 aa	Known RBP	13.2	□□□□□ -0.3
TP53-224	ENST00000619186	DBF4	Q9UBU7	674 aa	Predicted RBP	13.2	□□□□□ -0.3
TP53-224	ENST00000619186	GOLGA6L22	H0YM25	854 aa		13.19	□□□□□ -0.3
TP53-224	ENST00000619186	SGSM2	O43147	1006 aa		13.19	□□□□□ -0.3
TP53-224	ENST00000619186	RAB11FIP3	O75154	756 aa		13.19	□□□□□ -0.3
TP53-224	ENST00000619186	HSPA4	P34932	840 aa		13.19	□□□□□ -0.3
TP53-224	ENST00000619186	ZSCAN23	Q3MJ62	389 aa		13.19	□□□□□ -0.3
TP53-224	ENST00000619186	KLHDC4	Q8TBB5	520 aa		13.19	□□□□□ -0.3
TP53-224	ENST00000619186	CUL4A	Q13619	759 aa		13.19	□□□□□ -0.3
TP53-224	ENST00000619186	LSG1	Q9H089	658 aa	Known RBP	13.19	□□□□□ -0.3
TP53-224	ENST00000619186	AMOT	Q4VCS5	1084 aa		13.18	□□□□□ -0.3
TP53-224	ENST00000619186	DDX54	Q8TDD1	881 aa	Known RBP	13.18	□□□□□ -0.3
TP53-224	ENST00000619186	JARID2	Q92833	1246 aa	Predicted RBP	13.18	□□□□□ -0.3
TP53-224	ENST00000619186	SUCLG2	Q96I99	432 aa		13.18	□□□□□ -0.3
TP53-224	ENST00000619186	TMEM63C	Q9P1W3	806 aa		13.18	□□□□□ -0.3
TP53-224	ENST00000619186	MEGF6	O75095	1541 aa		13.18	□□□□□ -0.3
TP53-224	ENST00000619186	AOX1	Q06278	1338 aa		13.18	□□□□□ -0.3
TP53-224	ENST00000619186	SIPA1L3	O60292	1781 aa	Predicted RBP	13.18	□□□□□ -0.3
TP53-224	ENST00000619186	KSR2	Q6VAB6	950 aa		13.18	□□□□□ -0.3
TP53-224	ENST00000619186	GDPD2	Q9HCC8	539 aa		13.18	□□□□□ -0.3
TP53-224	ENST00000619186	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.18	□□□□□ -0.3
TP53-224	ENST00000619186	SNX14	Q9Y5W7	946 aa		13.18	□□□□□ -0.3
TP53-224	ENST00000619186	BRD1	O95696	1058 aa		13.17	□□□□□ -0.3
TP53-224	ENST00000619186	PRIM1	P49642	420 aa	Known RBP	13.17	□□□□□ -0.3
TP53-224	ENST00000619186	ANAPC15	P60006	121 aa		13.17	□□□□□ -0.3
TP53-224	ENST00000619186	PTH1R	Q03431	593 aa		13.17	□□□□□ -0.3
TP53-224	ENST00000619186	OS9	Q13438	667 aa	Predicted RBP	13.17	□□□□□ -0.3
TP53-224	ENST00000619186	PRDM11	Q9NQV5	511 aa		13.17	□□□□□ -0.3
TP53-224	ENST00000619186	TLR7	Q9NYK1	1049 aa	Known RBP	13.17	□□□□□ -0.3
TP53-224	ENST00000619186	RAD50	Q92878	1312 aa		13.17	□□□□□ -0.3
TP53-224	ENST00000619186	TCHH	Q07283	1943 aa		13.17	□□□□□ -0.3
TP53-224	ENST00000619186	IGKV5-2	P06315	115 aa		13.16	□□□□□ -0.3
TP53-224	ENST00000619186	MYL6B	P14649	208 aa		13.16	□□□□□ -0.3
TP53-224	ENST00000619186	IL17RA	Q96F46	866 aa		13.16	□□□□□ -0.3
TP53-224	ENST00000619186	RBSN	Q9H1K0	784 aa		13.16	□□□□□ -0.3
TP53-224	ENST00000619186	BICC1	Q9H694	974 aa	Known RBP	13.16	□□□□□ -0.3
TP53-224	ENST00000619186	KDM6A	O15550	1401 aa	Predicted RBP	13.16	□□□□□ -0.3
TP53-224	ENST00000619186	C5	P01031	1676 aa		13.16	□□□□□ -0.3
TP53-224	ENST00000619186	CAMTA1	Q9Y6Y1	1673 aa		13.16	□□□□□ -0.3
TP53-224	ENST00000619186	SASH1	O94885	1247 aa		13.16	□□□□□ -0.3
TP53-224	ENST00000619186	MCC	P23508	829 aa		13.16	□□□□□ -0.3
TP53-224	ENST00000619186	MTX1	Q13505	466 aa		13.16	□□□□□ -0.3
TP53-224	ENST00000619186	NFATC2IP	Q8NCF5	419 aa		13.16	□□□□□ -0.3
TP53-224	ENST00000619186	LARGE1	O95461	756 aa		13.15	□□□□□ -0.3
TP53-224	ENST00000619186	NASP	P49321	788 aa	Predicted RBP	13.15	□□□□□ -0.3
TP53-224	ENST00000619186	ADCK5	Q3MIX3	580 aa		13.15	□□□□□ -0.3
TP53-224	ENST00000619186	EPHA10	Q5JZY3	1008 aa		13.15	□□□□□ -0.3
TP53-224	ENST00000619186	RAPGEF4	Q8WZA2	1011 aa		13.15	□□□□□ -0.3
TP53-224	ENST00000619186	SIL1	Q9H173	461 aa		13.15	□□□□□ -0.3
TP53-224	ENST00000619186	ISY1	Q9ULR0	285 aa	Known RBP	13.15	□□□□□ -0.3
TP53-224	ENST00000619186	KCTD17	Q8N5Z5	321 aa		13.15	□□□□□ -0.3
TP53-224	ENST00000619186	EAF2	Q96CJ1	260 aa	Predicted RBP	13.15	□□□□□ -0.3
TP53-224	ENST00000619186	TTC14	Q96N46	770 aa		13.15	□□□□□ -0.3
TP53-224	ENST00000619186	PTMS	P20962	102 aa		13.14	□□□□□ -0.31
TP53-224	ENST00000619186	AK2	P54819	239 aa		13.14	□□□□□ -0.31
TP53-224	ENST00000619186	ZNF445	P59923	1031 aa		13.14	□□□□□ -0.31
TP53-224	ENST00000619186	ZNF790	Q6PG37	636 aa		13.14	□□□□□ -0.31
TP53-224	ENST00000619186	RUFY3	Q7L099	469 aa		13.14	□□□□□ -0.31
TP53-224	ENST00000619186	CNTROB	Q8N137	903 aa		13.14	□□□□□ -0.31
TP53-224	ENST00000619186	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.14	□□□□□ -0.31
TP53-224	ENST00000619186	STRN4	Q9NRL3	753 aa		13.14	□□□□□ -0.31
TP53-224	ENST00000619186	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.14	□□□□□ -0.31
TP53-224	ENST00000619186	USP42	Q9H9J4	1324 aa	Known RBP	13.14	□□□□□ -0.31
TP53-224	ENST00000619186	SYCE3	A1L190	88 aa		13.14	□□□□□ -0.31
TP53-224	ENST00000619186	GRM8	O00222	908 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms