RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 PTMSP20962 102 aa20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 BRD2P25440 801 aaKnown RBP20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 ANAPC15P60006 121 aa20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 NFATC2IPQ8NCF5 419 aa20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 HYPKQ9NX55 129 aa20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 SGSM2O43147 1006 aa20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 HSPA4P34932 840 aa20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 CHRNA2Q15822 529 aa20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 KLHL40Q2TBA0 621 aa20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 ZNF790Q6PG37 636 aa20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 RAPGEF4Q8WZA2 1011 aa20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 DDX21Q9NR30 783 aaKnown RBP eCLIP20.43■□□□□ 0.86
SEMA3B-213ENST00000618865 NPHP3Q7Z494 1330 aa20.42■□□□□ 0.86
SEMA3B-213ENST00000618865 MYL6BP14649 208 aa20.42■□□□□ 0.86
SEMA3B-213ENST00000618865 COL18A1P39060 1754 aa20.42■□□□□ 0.86
SEMA3B-213ENST00000618865 TMEM94Q12767 1356 aa20.42■□□□□ 0.86
SEMA3B-213ENST00000618865 IGKV5-2P06315 115 aa20.41■□□□□ 0.86
SEMA3B-213ENST00000618865 PHKG2P15735 406 aa20.41■□□□□ 0.86
SEMA3B-213ENST00000618865 PIP4K2AP48426 406 aaPredicted RBP20.41■□□□□ 0.86
SEMA3B-213ENST00000618865 CUL4AQ13619 759 aa20.41■□□□□ 0.86
SEMA3B-213ENST00000618865 CWC27Q6UX04 472 aaKnown RBP20.41■□□□□ 0.86
SEMA3B-213ENST00000618865 IL17RAQ96F46 866 aa20.41■□□□□ 0.86
SEMA3B-213ENST00000618865 SLC52A2Q9HAB3 445 aa20.41■□□□□ 0.86
SEMA3B-213ENST00000618865 NAP1L2Q9ULW6 460 aaPredicted RBP20.41■□□□□ 0.86
SEMA3B-213ENST00000618865 BICC1Q9H694 974 aaKnown RBP20.41■□□□□ 0.86
SEMA3B-213ENST00000618865 USP42Q9H9J4 1324 aaKnown RBP20.41■□□□□ 0.86
SEMA3B-213ENST00000618865 GRM8O00222 908 aa20.4■□□□□ 0.86
SEMA3B-213ENST00000618865 HSP90AB4PQ58FF6 505 aa20.4■□□□□ 0.86
SEMA3B-213ENST00000618865 SAMD1Q6SPF0 538 aaPredicted RBP20.4■□□□□ 0.86
SEMA3B-213ENST00000618865 CNTROBQ8N137 903 aa20.4■□□□□ 0.86
SEMA3B-213ENST00000618865 LINS1Q8NG48 757 aa20.4■□□□□ 0.86
SEMA3B-213ENST00000618865 LSG1Q9H089 658 aaKnown RBP20.4■□□□□ 0.86
SEMA3B-213ENST00000618865 SPG7Q9UQ90 795 aa20.4■□□□□ 0.86
SEMA3B-213ENST00000618865 ATF3P18847 181 aa20.4■□□□□ 0.86
SEMA3B-213ENST00000618865 RAD50Q92878 1312 aa20.4■□□□□ 0.86
SEMA3B-213ENST00000618865 RASEFQ8IZ41 740 aa20.4■□□□□ 0.86
SEMA3B-213ENST00000618865 PRPF40AO75400 957 aaKnown RBP20.39■□□□□ 0.85
SEMA3B-213ENST00000618865 NCLP19338 710 aaKnown RBP20.39■□□□□ 0.85
SEMA3B-213ENST00000618865 CLASRPQ8N2M8 674 aaKnown RBP20.39■□□□□ 0.85
SEMA3B-213ENST00000618865 ZNF496Q96IT1 587 aaPredicted RBP20.39■□□□□ 0.85
SEMA3B-213ENST00000618865 LMTK3Q96Q04 1460 aa20.38■□□□□ 0.85
SEMA3B-213ENST00000618865 MCM2P49736 904 aa20.38■□□□□ 0.85
SEMA3B-213ENST00000618865 SNX14Q9Y5W7 946 aa20.38■□□□□ 0.85
SEMA3B-213ENST00000618865 SASH1O94885 1247 aa20.38■□□□□ 0.85
SEMA3B-213ENST00000618865 TATP17735 454 aaPredicted RBP20.38■□□□□ 0.85
SEMA3B-213ENST00000618865 KLHDC4Q8TBB5 520 aa20.38■□□□□ 0.85
SEMA3B-213ENST00000618865 TTC41PQ6P2S7 1318 aa20.38■□□□□ 0.85
SEMA3B-213ENST00000618865 CSB-PGBD3P0DP91 1061 aa20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 CAVIN1Q6NZI2 390 aaKnown RBP20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 GPT2Q8TD30 523 aa20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 XAGE3Q8WTP9 111 aa20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 LARP6Q9BRS8 491 aaKnown RBP20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 UTYO14607 1347 aa20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 GLRX3O76003 335 aaKnown RBP20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 RIC3Q7Z5B4 369 aa20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 AACSQ86V21 672 aa20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 JARID2Q92833 1246 aaPredicted RBP20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 ISY1Q9ULR0 285 aaKnown RBP20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 CYP27B1O15528 508 aa20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 ECHDC1Q9NTX5 307 aa20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 USP16Q9Y5T5 823 aa20.37■□□□□ 0.85
SEMA3B-213ENST00000618865 DDX58O95786 925 aaKnown RBP20.36■□□□□ 0.85
SEMA3B-213ENST00000618865 COPS6Q7L5N1 327 aa20.36■□□□□ 0.85
SEMA3B-213ENST00000618865 SIL1Q9H173 461 aa20.36■□□□□ 0.85
SEMA3B-213ENST00000618865 TLR7Q9NYK1 1049 aaKnown RBP20.36■□□□□ 0.85
SEMA3B-213ENST00000618865 RBM27Q9P2N5 1060 aaKnown RBP20.36■□□□□ 0.85
SEMA3B-213ENST00000618865 NSFL1CQ9UNZ2 370 aaKnown RBP20.36■□□□□ 0.85
SEMA3B-213ENST00000618865 EPHA10Q5JZY3 1008 aa20.36■□□□□ 0.85
SEMA3B-213ENST00000618865 BRD1O95696 1058 aa20.35■□□□□ 0.85
SEMA3B-213ENST00000618865 CPA1P15085 419 aa20.35■□□□□ 0.85
SEMA3B-213ENST00000618865 PTH1RQ03431 593 aa20.35■□□□□ 0.85
SEMA3B-213ENST00000618865 EAF2Q96CJ1 260 aaPredicted RBP20.35■□□□□ 0.85
SEMA3B-213ENST00000618865 IFIT2P09913 472 aaKnown RBP20.35■□□□□ 0.85
SEMA3B-213ENST00000618865 CCDC8Q9H0W5 538 aaPredicted RBP20.35■□□□□ 0.85
SEMA3B-213ENST00000618865 NEURL1BA8MQ27 555 aa20.34■□□□□ 0.85
SEMA3B-213ENST00000618865 MYD88Q99836 296 aa20.34■□□□□ 0.85
SEMA3B-213ENST00000618865 LRP10Q7Z4F1 713 aa20.34■□□□□ 0.85
SEMA3B-213ENST00000618865 ZSCAN23Q3MJ62 389 aa20.33■□□□□ 0.85
SEMA3B-213ENST00000618865 IFNL2Q8IZJ0 200 aa20.33■□□□□ 0.85
SEMA3B-213ENST00000618865 INTS4Q96HW7 963 aaKnown RBP20.33■□□□□ 0.85
SEMA3B-213ENST00000618865 DIAPH3Q9NSV4 1193 aa20.33■□□□□ 0.85
SEMA3B-213ENST00000618865 EPB41L2O43491 1005 aaKnown RBP20.33■□□□□ 0.84
SEMA3B-213ENST00000618865 TTC14Q96N46 770 aa20.33■□□□□ 0.84
SEMA3B-213ENST00000618865 DTNBO60941 627 aa20.32■□□□□ 0.84
SEMA3B-213ENST00000618865 FOXD4L6Q3SYB3 417 aaPredicted RBP20.32■□□□□ 0.84
SEMA3B-213ENST00000618865 LARP1Q6PKG0 1096 aaKnown RBP20.32■□□□□ 0.84
SEMA3B-213ENST00000618865 FOXD4L3Q6VB84 417 aaPredicted RBP20.32■□□□□ 0.84
SEMA3B-213ENST00000618865 ERC1Q8IUD2 1116 aa20.32■□□□□ 0.84
SEMA3B-213ENST00000618865 GCKRQ14397 625 aa20.32■□□□□ 0.84
SEMA3B-213ENST00000618865 AK2P54819 239 aa20.31■□□□□ 0.84
SEMA3B-213ENST00000618865 TNS3Q68CZ2 1445 aa20.31■□□□□ 0.84
SEMA3B-213ENST00000618865 G3BP1Q13283 466 aaKnown RBP eCLIP20.31■□□□□ 0.84
SEMA3B-213ENST00000618865 KIAA1211Q6ZU35 1233 aa20.31■□□□□ 0.84
SEMA3B-213ENST00000618865 METTL22Q9BUU2 404 aaPredicted RBP20.3■□□□□ 0.84
SEMA3B-213ENST00000618865 ADCK5Q3MIX3 580 aa20.3■□□□□ 0.84
SEMA3B-213ENST00000618865 RUFY3Q7L099 469 aa20.3■□□□□ 0.84
SEMA3B-213ENST00000618865 FAM227BQ96M60 508 aa20.3■□□□□ 0.84
SEMA3B-213ENST00000618865 ZNF445P59923 1031 aa20.3■□□□□ 0.84
SEMA3B-213ENST00000618865 DDX54Q8TDD1 881 aaKnown RBP20.3■□□□□ 0.84
SEMA3B-213ENST00000618865 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms