RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 APBB1O00213 710 aa5.9□□□□□ -1.46
SYCP1-210ENST00000618516 CNBD1Q8NA66 436 aa5.9□□□□□ -1.46
SYCP1-210ENST00000618516 MAP3K2Q9Y2U5 619 aa5.9□□□□□ -1.46
SYCP1-210ENST00000618516 CEMIPQ8WUJ3 1361 aa5.9□□□□□ -1.46
SYCP1-210ENST00000618516 PARP4Q9UKK3 1724 aaKnown RBP5.9□□□□□ -1.46
SYCP1-210ENST00000618516 ARHGAP27Q6ZUM4 889 aa5.9□□□□□ -1.46
SYCP1-210ENST00000618516 MYH16Q9H6N6 1097 aa5.9□□□□□ -1.46
SYCP1-210ENST00000618516 CCER2I3L3R5 266 aa5.9□□□□□ -1.47
SYCP1-210ENST00000618516 PTGER2P43116 358 aa5.9□□□□□ -1.47
SYCP1-210ENST00000618516 EIF5P55010 431 aaKnown RBP5.9□□□□□ -1.47
SYCP1-210ENST00000618516 CALD1Q05682 793 aaKnown RBP5.9□□□□□ -1.47
SYCP1-210ENST00000618516 ANKRD13DQ6ZTN6 518 aa5.9□□□□□ -1.47
SYCP1-210ENST00000618516 IFT57Q9NWB7 429 aa5.9□□□□□ -1.47
SYCP1-210ENST00000618516 DPEP1P16444 411 aa5.89□□□□□ -1.47
SYCP1-210ENST00000618516 SSFA2P28290 1259 aa5.89□□□□□ -1.47
SYCP1-210ENST00000618516 UBE3BQ7Z3V4 1068 aa5.89□□□□□ -1.47
SYCP1-210ENST00000618516 NLGN1Q8N2Q7 840 aa5.89□□□□□ -1.47
SYCP1-210ENST00000618516 TOGARAM1Q9Y4F4 1720 aa5.89□□□□□ -1.47
SYCP1-210ENST00000618516 SOS1Q07889 1333 aaPredicted RBP5.89□□□□□ -1.47
SYCP1-210ENST00000618516 USP42Q9H9J4 1324 aaKnown RBP5.89□□□□□ -1.47
SYCP1-210ENST00000618516 C21orf2O43822 256 aa5.89□□□□□ -1.47
SYCP1-210ENST00000618516 ERFEQ4G0M1 354 aa5.89□□□□□ -1.47
SYCP1-210ENST00000618516 CCDC30Q5VVM6 783 aa5.89□□□□□ -1.47
SYCP1-210ENST00000618516 SSH1Q8WYL5 1049 aa5.89□□□□□ -1.47
SYCP1-210ENST00000618516 C1orf115Q9H7X2 142 aa5.89□□□□□ -1.47
SYCP1-210ENST00000618516 BCL2L12Q9HB09 334 aa5.89□□□□□ -1.47
SYCP1-210ENST00000618516 DBF4Q9UBU7 674 aaPredicted RBP5.89□□□□□ -1.47
SYCP1-210ENST00000618516 FLIIQ13045 1269 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 SUSD4Q5VX71 490 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 GPR101Q96P66 508 aaPredicted RBP5.88□□□□□ -1.47
SYCP1-210ENST00000618516 TEX13AQ9BXU3 409 aaPredicted RBP5.88□□□□□ -1.47
SYCP1-210ENST00000618516 NARFQ9UHQ1 456 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 CARMIL3Q8ND23 1372 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 HTATSF1O43719 755 aaKnown RBP5.88□□□□□ -1.47
SYCP1-210ENST00000618516 CAMTA2O94983 1202 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 IL6STP40189 918 aaPredicted RBP5.88□□□□□ -1.47
SYCP1-210ENST00000618516 C2CD5Q86YS7 1000 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 MYH14Q7Z406 1995 aaKnown RBP5.88□□□□□ -1.47
SYCP1-210ENST00000618516 A0A087WZG4 1122 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 VAMP4O75379 141 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 PDIA6Q15084 440 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 C3orf67Q6ZVT6 689 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 FBXW7Q969H0 707 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 DDX21Q9NR30 783 aaKnown RBP eCLIP5.88□□□□□ -1.47
SYCP1-210ENST00000618516 JAG2Q9Y219 1238 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 ZNF652Q9Y2D9 606 aa5.88□□□□□ -1.47
SYCP1-210ENST00000618516 ITGB4P16144 1822 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 SBF2Q86WG5 1849 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 SNAP23O00161 211 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 C9orf78Q9NZ63 289 aaPredicted RBP5.87□□□□□ -1.47
SYCP1-210ENST00000618516 NOB1Q9ULX3 412 aaKnown RBP5.87□□□□□ -1.47
SYCP1-210ENST00000618516 NCAPD2Q15021 1401 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 UBN2Q6ZU65 1347 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 E9PSI1 815 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 YBX3P16989 372 aaKnown RBP eCLIP5.87□□□□□ -1.47
SYCP1-210ENST00000618516 NEXNQ0ZGT2 675 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 PRR5LQ6MZQ0 368 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 TPTE2Q6XPS3 522 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 FTSJ3Q8IY81 847 aaKnown RBP5.87□□□□□ -1.47
SYCP1-210ENST00000618516 FLAD1Q8NFF5 587 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 HELBQ8NG08 1087 aaPredicted RBP5.87□□□□□ -1.47
SYCP1-210ENST00000618516 KLHDC4Q8TBB5 520 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 SIL1Q9H173 461 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 CNTNAP4Q9C0A0 1308 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 SHANK3Q9BYB0 1731 aa5.87□□□□□ -1.47
SYCP1-210ENST00000618516 POLRMTO00411 1230 aaKnown RBP5.86□□□□□ -1.47
SYCP1-210ENST00000618516 ST5P78524 1137 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 RASSF7Q02833 373 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 VSIG10Q8N0Z9 540 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 PANK1Q8TE04 598 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 RPGRQ92834 1020 aaKnown RBP5.86□□□□□ -1.47
SYCP1-210ENST00000618516 U3KPZ7 1027 aaPredicted RBP5.86□□□□□ -1.47
SYCP1-210ENST00000618516 MAP3K15Q6ZN16 1313 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 WTIPA6NIX2 430 aaPredicted RBP5.86□□□□□ -1.47
SYCP1-210ENST00000618516 H0YIN7 160 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 RIMBP2O15034 1052 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 SLFN5Q08AF3 891 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 ITPRIPQ8IWB1 547 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 SEC31BQ9NQW1 1179 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 RGPD1P0DJD0 1748 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 TNS1Q9HBL0 1735 aaKnown RBP5.86□□□□□ -1.47
SYCP1-210ENST00000618516 DLG5Q8TDM6 1919 aa5.86□□□□□ -1.47
SYCP1-210ENST00000618516 DDX58O95786 925 aaKnown RBP5.85□□□□□ -1.47
SYCP1-210ENST00000618516 USP54Q70EL1 1684 aa5.85□□□□□ -1.47
SYCP1-210ENST00000618516 ZNF853P0CG23 659 aa5.85□□□□□ -1.47
SYCP1-210ENST00000618516 TAF7LQ5H9L4 462 aa5.85□□□□□ -1.47
SYCP1-210ENST00000618516 RC3H1Q5TC82 1133 aaKnown RBP5.85□□□□□ -1.47
SYCP1-210ENST00000618516 GIGYF2Q6Y7W6 1299 aaKnown RBP5.85□□□□□ -1.47
SYCP1-210ENST00000618516 WDR63Q8IWG1 891 aa5.85□□□□□ -1.47
SYCP1-210ENST00000618516 ZNF594Q96JF6 807 aaPredicted RBP5.85□□□□□ -1.47
SYCP1-210ENST00000618516 HYPKQ9NX55 129 aa5.85□□□□□ -1.47
SYCP1-210ENST00000618516 NSFL1CQ9UNZ2 370 aaKnown RBP5.85□□□□□ -1.47
SYCP1-210ENST00000618516 IRS4O14654 1257 aaPredicted RBP5.85□□□□□ -1.47
SYCP1-210ENST00000618516 YY1P25490 414 aa5.85□□□□□ -1.47
SYCP1-210ENST00000618516 DNAAF4Q8WXU2 420 aa5.85□□□□□ -1.47
SYCP1-210ENST00000618516 UTP14AQ9BVJ6 771 aaKnown RBP5.85□□□□□ -1.47
SYCP1-210ENST00000618516 SCAF8Q9UPN6 1271 aaKnown RBP5.85□□□□□ -1.47
SYCP1-210ENST00000618516 IQSEC3Q9UPP2 1182 aaPredicted RBP5.85□□□□□ -1.47
SYCP1-210ENST00000618516 COG6Q9Y2V7 657 aa5.85□□□□□ -1.47
SYCP1-210ENST00000618516 NHSQ6T4R5 1651 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms