RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 MCM6Q14566 821 aa21.78■■□□□ 1.08
SPAST-203ENST00000615843 ARHGAP45Q92619 1136 aa21.78■■□□□ 1.08
SPAST-203ENST00000615843 PHAXQ9H814 394 aaKnown RBP21.78■■□□□ 1.08
SPAST-203ENST00000615843 CCDC178Q5BJE1 867 aa21.78■■□□□ 1.08
SPAST-203ENST00000615843 PTGS1P23219 599 aa21.78■■□□□ 1.08
SPAST-203ENST00000615843 UBASH3AP57075 661 aa21.78■■□□□ 1.08
SPAST-203ENST00000615843 NECAB1Q8N987 351 aa21.78■■□□□ 1.08
SPAST-203ENST00000615843 NAA15Q9BXJ9 866 aaKnown RBP21.77■■□□□ 1.08
SPAST-203ENST00000615843 GOLGA6L10A0A0M3HER8 536 aa21.77■■□□□ 1.08
SPAST-203ENST00000615843 CCDC196A0A1B0GTZ2 297 aa21.77■■□□□ 1.08
SPAST-203ENST00000615843 CCDC175P0C221 793 aa21.77■■□□□ 1.08
SPAST-203ENST00000615843 ESYT1Q9BSJ8 1104 aa21.77■■□□□ 1.08
SPAST-203ENST00000615843 IFIT1P09914 478 aaKnown RBP21.76■■□□□ 1.07
SPAST-203ENST00000615843 DNM1Q05193 864 aaKnown RBP21.76■■□□□ 1.07
SPAST-203ENST00000615843 HLTFQ14527 1009 aaKnown RBP eCLIP21.76■■□□□ 1.07
SPAST-203ENST00000615843 MPHOSPH8Q99549 860 aa21.76■■□□□ 1.07
SPAST-203ENST00000615843 TYRO3Q06418 890 aa21.76■■□□□ 1.07
SPAST-203ENST00000615843 FLIIQ13045 1269 aa21.76■■□□□ 1.07
SPAST-203ENST00000615843 ALS2CR12Q96Q35 445 aa21.76■■□□□ 1.07
SPAST-203ENST00000615843 SPECC1Q5M775 1068 aa21.76■■□□□ 1.07
SPAST-203ENST00000615843 POLR3DP05423 398 aaPredicted RBP21.76■■□□□ 1.07
SPAST-203ENST00000615843 ESCO1Q5FWF5 840 aa21.76■■□□□ 1.07
SPAST-203ENST00000615843 CCDC102BQ68D86 513 aa21.76■■□□□ 1.07
SPAST-203ENST00000615843 MBIPQ9NS73 344 aa21.76■■□□□ 1.07
SPAST-203ENST00000615843 SMC1AQ14683 1233 aaKnown RBP21.75■■□□□ 1.07
SPAST-203ENST00000615843 NEK1Q96PY6 1258 aa21.75■■□□□ 1.07
SPAST-203ENST00000615843 RBSNQ9H1K0 784 aa21.75■■□□□ 1.07
SPAST-203ENST00000615843 HMG20BQ9P0W2 317 aa21.75■■□□□ 1.07
SPAST-203ENST00000615843 CTAGE15A4D2H0 777 aa21.75■■□□□ 1.07
SPAST-203ENST00000615843 CTAGE8P0CG41 777 aa21.75■■□□□ 1.07
SPAST-203ENST00000615843 CTAGE6Q86UF2 777 aa21.75■■□□□ 1.07
SPAST-203ENST00000615843 CTAGE4Q8IX94 777 aa21.75■■□□□ 1.07
SPAST-203ENST00000615843 ZGPATQ8N5A5 531 aaKnown RBP21.75■■□□□ 1.07
SPAST-203ENST00000615843 CAPN2P17655 700 aa21.74■■□□□ 1.07
SPAST-203ENST00000615843 PDE1AP54750 535 aa21.74■■□□□ 1.07
SPAST-203ENST00000615843 SPINK5Q9NQ38 1064 aaPredicted RBP21.74■■□□□ 1.07
SPAST-203ENST00000615843 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.74■■□□□ 1.07
SPAST-203ENST00000615843 TDRD12Q587J7 1177 aaKnown RBP21.74■■□□□ 1.07
SPAST-203ENST00000615843 LARP1Q6PKG0 1096 aaKnown RBP21.74■■□□□ 1.07
SPAST-203ENST00000615843 AOPEPQ8N6M6 819 aa21.74■■□□□ 1.07
SPAST-203ENST00000615843 EMILIN1Q9Y6C2 1016 aa21.74■■□□□ 1.07
SPAST-203ENST00000615843 ATP2B2Q01814 1243 aa21.74■■□□□ 1.07
SPAST-203ENST00000615843 GOPCQ9HD26 462 aa21.74■■□□□ 1.07
SPAST-203ENST00000615843 CAMSAP2Q08AD1 1489 aa21.74■■□□□ 1.07
SPAST-203ENST00000615843 PARD3Q8TEW0 1356 aa21.74■■□□□ 1.07
SPAST-203ENST00000615843 MAATS1Q7Z4T9 603 aa21.73■■□□□ 1.07
SPAST-203ENST00000615843 JADE2Q9NQC1 790 aa21.73■■□□□ 1.07
SPAST-203ENST00000615843 USP16Q9Y5T5 823 aa21.73■■□□□ 1.07
SPAST-203ENST00000615843 ZNF213O14771 459 aa21.73■■□□□ 1.07
SPAST-203ENST00000615843 ORC3Q9UBD5 711 aaPredicted RBP21.73■■□□□ 1.07
SPAST-203ENST00000615843 SCAF11Q99590 1463 aaKnown RBP21.73■■□□□ 1.07
SPAST-203ENST00000615843 LRP2BPQ9P2M1 347 aa21.73■■□□□ 1.07
SPAST-203ENST00000615843 CCDC61Q9Y6R9 512 aa21.73■■□□□ 1.07
SPAST-203ENST00000615843 KIF20AO95235 890 aa21.73■■□□□ 1.07
SPAST-203ENST00000615843 SSRP1Q08945 709 aaKnown RBP21.73■■□□□ 1.07
SPAST-203ENST00000615843 RNF216Q9NWF9 866 aaPredicted RBP21.73■■□□□ 1.07
SPAST-203ENST00000615843 SLC12A7Q9Y666 1083 aa21.73■■□□□ 1.07
SPAST-203ENST00000615843 GCOM1H8Y6P7 765 aaPredicted RBP21.72■■□□□ 1.07
SPAST-203ENST00000615843 MYZAPP0CAP1 466 aa21.72■■□□□ 1.07
SPAST-203ENST00000615843 CCDC82Q8N4S0 544 aa21.72■■□□□ 1.07
SPAST-203ENST00000615843 NUDT16Q96DE0 195 aaKnown RBP21.72■■□□□ 1.07
SPAST-203ENST00000615843 TSG101Q99816 390 aa21.72■■□□□ 1.07
SPAST-203ENST00000615843 AKAP2Q9Y2D5 859 aa21.72■■□□□ 1.07
SPAST-203ENST00000615843 NSD2O96028 1365 aa21.72■■□□□ 1.07
SPAST-203ENST00000615843 GOLGA8AA7E2F4 631 aa21.72■■□□□ 1.07
SPAST-203ENST00000615843 VPS36Q86VN1 386 aa21.72■■□□□ 1.07
SPAST-203ENST00000615843 EHBP1Q8NDI1 1231 aa21.72■■□□□ 1.07
SPAST-203ENST00000615843 ATF3P18847 181 aa21.72■■□□□ 1.07
SPAST-203ENST00000615843 TERF1P54274 439 aa21.72■■□□□ 1.07
SPAST-203ENST00000615843 SYT1P21579 422 aa21.72■■□□□ 1.07
SPAST-203ENST00000615843 TNNQ9UQP3 1299 aa21.71■■□□□ 1.07
SPAST-203ENST00000615843 HSF2BPO75031 334 aa21.71■■□□□ 1.07
SPAST-203ENST00000615843 MATR3P43243 847 aaKnown RBP eCLIP21.71■■□□□ 1.079e-6■■□□□ 13
SPAST-203ENST00000615843 ANKRD44Q8N8A2 993 aa21.71■■□□□ 1.07
SPAST-203ENST00000615843 CCDC85AQ96PX6 553 aaPredicted RBP21.71■■□□□ 1.07
SPAST-203ENST00000615843 RLBP1P12271 317 aa21.71■■□□□ 1.07
SPAST-203ENST00000615843 PPP1R42Q7Z4L9 355 aa21.71■■□□□ 1.07
SPAST-203ENST00000615843 GOLGA1Q92805 767 aa21.71■■□□□ 1.07
SPAST-203ENST00000615843 FGFR1OPO95684 399 aaKnown RBP21.71■■□□□ 1.07
SPAST-203ENST00000615843 SYKP43405 635 aa21.71■■□□□ 1.07
SPAST-203ENST00000615843 NAPBQ9H115 298 aa21.71■■□□□ 1.07
SPAST-203ENST00000615843 CKAP4Q07065 602 aaKnown RBP21.7■■□□□ 1.06
SPAST-203ENST00000615843 KANK3Q6NY19 840 aa21.7■■□□□ 1.06
SPAST-203ENST00000615843 MRPS27Q92552 414 aaKnown RBP21.7■■□□□ 1.06
SPAST-203ENST00000615843 PPFIA3O75145 1194 aa21.7■■□□□ 1.06
SPAST-203ENST00000615843 NF2P35240 595 aa21.7■■□□□ 1.06
SPAST-203ENST00000615843 IRX3P78415 501 aaPredicted RBP21.7■■□□□ 1.06
SPAST-203ENST00000615843 MTIF2P46199 727 aaKnown RBP21.7■■□□□ 1.06
SPAST-203ENST00000615843 CCDC91Q7Z6B0 441 aa21.7■■□□□ 1.06
SPAST-203ENST00000615843 NME9Q86XW9 330 aa21.69■■□□□ 1.06
SPAST-203ENST00000615843 MICALL1Q8N3F8 863 aa21.69■■□□□ 1.06
SPAST-203ENST00000615843 CEP112Q8N8E3 955 aa21.69■■□□□ 1.06
SPAST-203ENST00000615843 RALGAPBQ86X10 1494 aa21.69■■□□□ 1.06
SPAST-203ENST00000615843 N4BP3O15049 544 aa21.69■■□□□ 1.06
SPAST-203ENST00000615843 METTL24Q5JXM2 366 aa21.69■■□□□ 1.06
SPAST-203ENST00000615843 SPECC1LQ69YQ0 1117 aa21.69■■□□□ 1.06
SPAST-203ENST00000615843 BRF1Q92994 677 aa21.69■■□□□ 1.06
SPAST-203ENST00000615843 MEIS3Q99687 375 aa21.69■■□□□ 1.06
SPAST-203ENST00000615843 PPP1R12BO60237 982 aaPredicted RBP21.68■■□□□ 1.06
SPAST-203ENST00000615843 IARSP41252 1262 aaKnown RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms