RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 H0YIN7 160 aa15□□□□□ -0.01
CCDC12-209ENST00000604164 TPTE2Q6XPS3 522 aa15□□□□□ -0.01
CCDC12-209ENST00000604164 NBPF5PQ86XG9 351 aaPredicted RBP15□□□□□ -0.01
CCDC12-209ENST00000604164 NGEFQ8N5V2 710 aa15□□□□□ -0.01
CCDC12-209ENST00000604164 NIP7Q9Y221 180 aaKnown RBP eCLIP15□□□□□ -0.01
CCDC12-209ENST00000604164 BCORQ6W2J9 1755 aa15□□□□□ -0.01
CCDC12-209ENST00000604164 ZNF853P0CG23 659 aa14.99□□□□□ -0.01
CCDC12-209ENST00000604164 KCNA3P22001 575 aa14.99□□□□□ -0.01
CCDC12-209ENST00000604164 NYXQ9GZU5 481 aa14.99□□□□□ -0.01
CCDC12-209ENST00000604164 MBIPQ9NS73 344 aa14.99□□□□□ -0.01
CCDC12-209ENST00000604164 WWC3Q9ULE0 1092 aa14.99□□□□□ -0.01
CCDC12-209ENST00000604164 HDGFL1Q5TGJ6 251 aa14.98□□□□□ -0.01
CCDC12-209ENST00000604164 PRR5LQ6MZQ0 368 aa14.98□□□□□ -0.01
CCDC12-209ENST00000604164 C2CD5Q86YS7 1000 aa14.98□□□□□ -0.01
CCDC12-209ENST00000604164 DDX21Q9NR30 783 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC12-209ENST00000604164 N4BP2Q86UW6 1770 aaPredicted RBP14.98□□□□□ -0.01
CCDC12-209ENST00000604164 AFDNP55196 1824 aaKnown RBP14.97□□□□□ -0.01
CCDC12-209ENST00000604164 GTF2E1P29083 439 aaPredicted RBP14.97□□□□□ -0.01
CCDC12-209ENST00000604164 CHRNA5P30532 468 aa14.97□□□□□ -0.01
CCDC12-209ENST00000604164 DUSP27Q5VZP5 1158 aa14.97□□□□□ -0.01
CCDC12-209ENST00000604164 TTLL6Q8N841 843 aa14.97□□□□□ -0.01
CCDC12-209ENST00000604164 DBF4Q9UBU7 674 aaPredicted RBP14.97□□□□□ -0.01
CCDC12-209ENST00000604164 KIAA1551Q9HCM1 1747 aa14.97□□□□□ -0.01
CCDC12-209ENST00000604164 IL16Q14005 1332 aa14.96□□□□□ -0.01
CCDC12-209ENST00000604164 PDIA6Q15084 440 aa14.96□□□□□ -0.01
CCDC12-209ENST00000604164 HSP90AB3PQ58FF7 597 aa14.96□□□□□ -0.01
CCDC12-209ENST00000604164 GIGYF2Q6Y7W6 1299 aaKnown RBP14.96□□□□□ -0.01
CCDC12-209ENST00000604164 ARHGAP27Q6ZUM4 889 aa14.96□□□□□ -0.01
CCDC12-209ENST00000604164 WWC1Q8IX03 1113 aa14.96□□□□□ -0.01
CCDC12-209ENST00000604164 ATP10DQ9P241 1426 aa14.96□□□□□ -0.01
CCDC12-209ENST00000604164 HLFQ16534 295 aa14.95□□□□□ -0.02
CCDC12-209ENST00000604164 PARP10Q53GL7 1025 aa14.95□□□□□ -0.02
CCDC12-209ENST00000604164 TTLL7Q6ZT98 887 aa14.95□□□□□ -0.02
CCDC12-209ENST00000604164 ZNF784Q8NCA9 323 aaPredicted RBP14.95□□□□□ -0.02
CCDC12-209ENST00000604164 ZBTB3Q9H5J0 574 aa14.95□□□□□ -0.02
CCDC12-209ENST00000604164 HYPKQ9NX55 129 aa14.95□□□□□ -0.02
CCDC12-209ENST00000604164 KRT24Q2M2I5 525 aa14.94□□□□□ -0.02
CCDC12-209ENST00000604164 PPP1R42Q7Z4L9 355 aa14.94□□□□□ -0.02
CCDC12-209ENST00000604164 FAM9BQ8IZU0 186 aa14.94□□□□□ -0.02
CCDC12-209ENST00000604164 NECTIN2Q92692 538 aa14.94□□□□□ -0.02
CCDC12-209ENST00000604164 CNKSR1Q969H4 720 aa14.94□□□□□ -0.02
CCDC12-209ENST00000604164 ZNF622Q969S3 477 aaKnown RBP eCLIP14.94□□□□□ -0.025e-8■□□□□ 11.2
CCDC12-209ENST00000604164 IBTKQ9P2D0 1353 aaPredicted RBP14.94□□□□□ -0.02
CCDC12-209ENST00000604164 BRCA1P38398 1863 aaKnown RBP14.93□□□□□ -0.02
CCDC12-209ENST00000604164 STYK1Q6J9G0 422 aa14.93□□□□□ -0.02
CCDC12-209ENST00000604164 COPS6Q7L5N1 327 aa14.93□□□□□ -0.02
CCDC12-209ENST00000604164 LRP10Q7Z4F1 713 aa14.93□□□□□ -0.02
CCDC12-209ENST00000604164 WDR63Q8IWG1 891 aa14.93□□□□□ -0.02
CCDC12-209ENST00000604164 MASTLQ96GX5 879 aa14.93□□□□□ -0.02
CCDC12-209ENST00000604164 CHPF2Q9P2E5 772 aa14.93□□□□□ -0.02
CCDC12-209ENST00000604164 AIMP1Q12904 312 aaKnown RBP14.92□□□□□ -0.02
CCDC12-209ENST00000604164 PROSER3Q2NL68 480 aa14.92□□□□□ -0.02
CCDC12-209ENST00000604164 SOGA3Q5TF21 947 aa14.92□□□□□ -0.02
CCDC12-209ENST00000604164 CCDC30Q5VVM6 783 aa14.92□□□□□ -0.02
CCDC12-209ENST00000604164 ZNF34Q8IZ26 560 aa14.92□□□□□ -0.02
CCDC12-209ENST00000604164 XAGE3Q8WTP9 111 aa14.92□□□□□ -0.02
CCDC12-209ENST00000604164 ARFGEF1Q9Y6D6 1849 aa14.92□□□□□ -0.02
CCDC12-209ENST00000604164 RNF123Q5XPI4 1314 aa14.92□□□□□ -0.02
CCDC12-209ENST00000604164 FAM177BA6PVY3 158 aa14.91□□□□□ -0.02
CCDC12-209ENST00000604164 ANXA1P04083 346 aa14.91□□□□□ -0.02
CCDC12-209ENST00000604164 SRGNP10124 158 aa14.91□□□□□ -0.02
CCDC12-209ENST00000604164 NPR1P16066 1061 aa14.91□□□□□ -0.02
CCDC12-209ENST00000604164 PLBD2Q8NHP8 589 aa14.91□□□□□ -0.02
CCDC12-209ENST00000604164 DLEC1Q9Y238 1755 aa14.9□□□□□ -0.02
CCDC12-209ENST00000604164 KLRG2A4D1S0 409 aaPredicted RBP14.9□□□□□ -0.02
CCDC12-209ENST00000604164 GPTP24298 496 aa14.9□□□□□ -0.02
CCDC12-209ENST00000604164 ANKRD13DQ6ZTN6 518 aa14.9□□□□□ -0.02
CCDC12-209ENST00000604164 CCDC24Q8N4L8 307 aa14.9□□□□□ -0.02
CCDC12-209ENST00000604164 NUP98P52948 1817 aa14.89□□□□□ -0.03
CCDC12-209ENST00000604164 ALDH1B1P30837 517 aa14.89□□□□□ -0.03
CCDC12-209ENST00000604164 GOLGA2Q08379 1002 aa14.89□□□□□ -0.03
CCDC12-209ENST00000604164 TCIRG1Q13488 830 aa14.89□□□□□ -0.03
CCDC12-209ENST00000604164 UTP14AQ9BVJ6 771 aaKnown RBP14.89□□□□□ -0.03
CCDC12-209ENST00000604164 STK31Q9BXU1 1019 aa14.89□□□□□ -0.03
CCDC12-209ENST00000604164 RIC1Q4ADV7 1423 aa14.89□□□□□ -0.03
CCDC12-209ENST00000604164 GOLGB1Q14789 3259 aaKnown RBP14.89□□□□□ -0.03
CCDC12-209ENST00000604164 ADCY9O60503 1353 aa14.88□□□□□ -0.03
CCDC12-209ENST00000604164 CCER2I3L3R5 266 aa14.88□□□□□ -0.03
CCDC12-209ENST00000604164 ELL2O00472 640 aaPredicted RBP14.88□□□□□ -0.03
CCDC12-209ENST00000604164 DDX58O95786 925 aaKnown RBP14.88□□□□□ -0.03
CCDC12-209ENST00000604164 SUSD4Q5VX71 490 aa14.88□□□□□ -0.03
CCDC12-209ENST00000604164 C8orf58Q8NAV2 365 aa14.88□□□□□ -0.03
CCDC12-209ENST00000604164 MYH16Q9H6N6 1097 aa14.88□□□□□ -0.03
CCDC12-209ENST00000604164 ANKRD31Q8N7Z5 1873 aa14.88□□□□□ -0.03
CCDC12-209ENST00000604164 UBN2Q6ZU65 1347 aa14.88□□□□□ -0.03
CCDC12-209ENST00000604164 ERFEQ4G0M1 354 aa14.87□□□□□ -0.03
CCDC12-209ENST00000604164 PRPF40BQ6NWY9 871 aaKnown RBP14.87□□□□□ -0.03
CCDC12-209ENST00000604164 RPGRQ92834 1020 aaKnown RBP14.87□□□□□ -0.03
CCDC12-209ENST00000604164 TSR2Q969E8 191 aaKnown RBP14.87□□□□□ -0.03
CCDC12-209ENST00000604164 GPBP1L1Q9HC44 474 aaPredicted RBP14.87□□□□□ -0.03
CCDC12-209ENST00000604164 SALL2Q9Y467 1007 aaPredicted RBP14.87□□□□□ -0.03
CCDC12-209ENST00000604164 UTRNP46939 3433 aa14.87□□□□□ -0.03
CCDC12-209ENST00000604164 NTSR2O95665 410 aa14.86□□□□□ -0.03
CCDC12-209ENST00000604164 TWISTNBQ3B726 338 aaPredicted RBP14.86□□□□□ -0.03
CCDC12-209ENST00000604164 CRY2Q49AN0 593 aa14.86□□□□□ -0.03
CCDC12-209ENST00000604164 C9orf131Q5VYM1 1079 aa14.86□□□□□ -0.03
CCDC12-209ENST00000604164 RIC3Q7Z5B4 369 aa14.86□□□□□ -0.03
CCDC12-209ENST00000604164 NUTM1Q86Y26 1132 aa14.86□□□□□ -0.03
CCDC12-209ENST00000604164 NLRP3Q96P20 1036 aa14.86□□□□□ -0.03
CCDC12-209ENST00000604164 ZC3H4Q9UPT8 1303 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms