RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 IFT57Q9NWB7 429 aa20.63■□□□□ 0.89
PPFIA4-213ENST00000601609 PIM2Q9P1W9 311 aa20.63■□□□□ 0.89
PPFIA4-213ENST00000601609 NIP7Q9Y221 180 aaKnown RBP eCLIP20.63■□□□□ 0.89
PPFIA4-213ENST00000601609 FAM177BA6PVY3 158 aa20.62■□□□□ 0.89
PPFIA4-213ENST00000601609 ANXA1P04083 346 aa20.62■□□□□ 0.89
PPFIA4-213ENST00000601609 NBPF5PQ86XG9 351 aaPredicted RBP20.62■□□□□ 0.89
PPFIA4-213ENST00000601609 ZBTB3Q9H5J0 574 aa20.62■□□□□ 0.89
PPFIA4-213ENST00000601609 MAP3K15Q6ZN16 1313 aa20.61■□□□□ 0.89
PPFIA4-213ENST00000601609 DALRD3Q5D0E6 543 aaKnown RBP20.61■□□□□ 0.89
PPFIA4-213ENST00000601609 HDGFL1Q5TGJ6 251 aa20.61■□□□□ 0.89
PPFIA4-213ENST00000601609 PRR5LQ6MZQ0 368 aa20.61■□□□□ 0.89
PPFIA4-213ENST00000601609 TTLL7Q6ZT98 887 aa20.61■□□□□ 0.89
PPFIA4-213ENST00000601609 C2CD5Q86YS7 1000 aa20.61■□□□□ 0.89
PPFIA4-213ENST00000601609 SALL2Q9Y467 1007 aaPredicted RBP20.61■□□□□ 0.89
PPFIA4-213ENST00000601609 HLFQ16534 295 aa20.6■□□□□ 0.89
PPFIA4-213ENST00000601609 BRCA1P38398 1863 aaKnown RBP20.59■□□□□ 0.89
PPFIA4-213ENST00000601609 H0YIN7 160 aa20.59■□□□□ 0.89
PPFIA4-213ENST00000601609 GTF2E1P29083 439 aaPredicted RBP20.59■□□□□ 0.89
PPFIA4-213ENST00000601609 PROSER3Q2NL68 480 aa20.59■□□□□ 0.89
PPFIA4-213ENST00000601609 ERVV-1B6SEH8 477 aa20.58■□□□□ 0.89
PPFIA4-213ENST00000601609 RGL2O15211 777 aa20.58■□□□□ 0.89
PPFIA4-213ENST00000601609 KCNA3P22001 575 aa20.58■□□□□ 0.89
PPFIA4-213ENST00000601609 PDE6BP35913 854 aa20.58■□□□□ 0.89
PPFIA4-213ENST00000601609 AIMP1Q12904 312 aaKnown RBP20.58■□□□□ 0.89
PPFIA4-213ENST00000601609 DUSP27Q5VZP5 1158 aa20.58■□□□□ 0.89
PPFIA4-213ENST00000601609 ARHGAP27Q6ZUM4 889 aa20.58■□□□□ 0.89
PPFIA4-213ENST00000601609 HOXB7P09629 217 aa20.57■□□□□ 0.88
PPFIA4-213ENST00000601609 ZNF853P0CG23 659 aa20.57■□□□□ 0.88
PPFIA4-213ENST00000601609 BRIP1Q9BX63 1249 aa20.57■□□□□ 0.88
PPFIA4-213ENST00000601609 CHPF2Q9P2E5 772 aa20.57■□□□□ 0.88
PPFIA4-213ENST00000601609 NUP98P52948 1817 aa20.56■□□□□ 0.88
PPFIA4-213ENST00000601609 ELL2O00472 640 aaPredicted RBP20.56■□□□□ 0.88
PPFIA4-213ENST00000601609 GPTP24298 496 aa20.56■□□□□ 0.88
PPFIA4-213ENST00000601609 CCDC27Q2M243 656 aa20.56■□□□□ 0.88
PPFIA4-213ENST00000601609 TPTE2Q6XPS3 522 aa20.56■□□□□ 0.88
PPFIA4-213ENST00000601609 ZNF622Q969S3 477 aaKnown RBP eCLIP20.56■□□□□ 0.88
PPFIA4-213ENST00000601609 DDX21Q9NR30 783 aaKnown RBP eCLIP20.56■□□□□ 0.88
PPFIA4-213ENST00000601609 ANKRD31Q8N7Z5 1873 aa20.56■□□□□ 0.88
PPFIA4-213ENST00000601609 PDIA6Q15084 440 aa20.55■□□□□ 0.88
PPFIA4-213ENST00000601609 WWC1Q8IX03 1113 aa20.55■□□□□ 0.88
PPFIA4-213ENST00000601609 XAGE3Q8WTP9 111 aa20.55■□□□□ 0.88
PPFIA4-213ENST00000601609 DLEC1Q9Y238 1755 aa20.54■□□□□ 0.88
PPFIA4-213ENST00000601609 COPS6Q7L5N1 327 aa20.54■□□□□ 0.88
PPFIA4-213ENST00000601609 TSR2Q969E8 191 aaKnown RBP20.54■□□□□ 0.88
PPFIA4-213ENST00000601609 DBF4Q9UBU7 674 aaPredicted RBP20.54■□□□□ 0.88
PPFIA4-213ENST00000601609 PDZRN3Q9UPQ7 1066 aa20.54■□□□□ 0.88
PPFIA4-213ENST00000601609 ARFGEF1Q9Y6D6 1849 aa20.54■□□□□ 0.88
PPFIA4-213ENST00000601609 ATP10DQ9P241 1426 aa20.53■□□□□ 0.88
PPFIA4-213ENST00000601609 TTLL6Q8N841 843 aa20.53■□□□□ 0.88
PPFIA4-213ENST00000601609 ZNF784Q8NCA9 323 aaPredicted RBP20.53■□□□□ 0.88
PPFIA4-213ENST00000601609 NYXQ9GZU5 481 aa20.53■□□□□ 0.88
PPFIA4-213ENST00000601609 COL11A2P13942 1736 aaPredicted RBP20.53■□□□□ 0.88
PPFIA4-213ENST00000601609 GIGYF2Q6Y7W6 1299 aaKnown RBP20.52■□□□□ 0.88
PPFIA4-213ENST00000601609 LRP10Q7Z4F1 713 aa20.51■□□□□ 0.87
PPFIA4-213ENST00000601609 ZNF219Q9P2Y4 722 aaPredicted RBP20.51■□□□□ 0.87
PPFIA4-213ENST00000601609 GOLGB1Q14789 3259 aaKnown RBP20.51■□□□□ 0.87
PPFIA4-213ENST00000601609 HSP90AB3PQ58FF7 597 aa20.5■□□□□ 0.87
PPFIA4-213ENST00000601609 NUTM1Q86Y26 1132 aa20.5■□□□□ 0.87
PPFIA4-213ENST00000601609 C8orf58Q8NAV2 365 aa20.5■□□□□ 0.87
PPFIA4-213ENST00000601609 HYPKQ9NX55 129 aa20.5■□□□□ 0.87
PPFIA4-213ENST00000601609 UBN2Q6ZU65 1347 aa20.5■□□□□ 0.87
PPFIA4-213ENST00000601609 UTRNP46939 3433 aa20.49■□□□□ 0.87
PPFIA4-213ENST00000601609 PPP1R42Q7Z4L9 355 aa20.49■□□□□ 0.87
PPFIA4-213ENST00000601609 IL16Q14005 1332 aa20.49■□□□□ 0.87
PPFIA4-213ENST00000601609 CACNA1SQ13698 1873 aa20.48■□□□□ 0.87
PPFIA4-213ENST00000601609 NCBP3Q53F19 620 aaKnown RBP20.48■□□□□ 0.87
PPFIA4-213ENST00000601609 PARP10Q53GL7 1025 aa20.48■□□□□ 0.87
PPFIA4-213ENST00000601609 ZNF34Q8IZ26 560 aa20.48■□□□□ 0.87
PPFIA4-213ENST00000601609 CNKSR1Q969H4 720 aa20.48■□□□□ 0.87
PPFIA4-213ENST00000601609 MASTLQ96GX5 879 aa20.48■□□□□ 0.87
PPFIA4-213ENST00000601609 CHMP4AQ9BY43 222 aa20.48■□□□□ 0.87
PPFIA4-213ENST00000601609 ABCC12Q96J65 1359 aa20.47■□□□□ 0.87
PPFIA4-213ENST00000601609 ANKRD36CQ5JPF3 1778 aa20.47■□□□□ 0.87
PPFIA4-213ENST00000601609 ERFEQ4G0M1 354 aa20.47■□□□□ 0.87
PPFIA4-213ENST00000601609 CCDC30Q5VVM6 783 aa20.47■□□□□ 0.87
PPFIA4-213ENST00000601609 SUSD4Q5VX71 490 aa20.47■□□□□ 0.87
PPFIA4-213ENST00000601609 ZNF526Q8TF50 670 aaPredicted RBP20.47■□□□□ 0.87
PPFIA4-213ENST00000601609 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
PPFIA4-213ENST00000601609 SRGNP10124 158 aa20.46■□□□□ 0.87
PPFIA4-213ENST00000601609 GOLGA2Q08379 1002 aa20.46■□□□□ 0.87
PPFIA4-213ENST00000601609 STYK1Q6J9G0 422 aa20.46■□□□□ 0.87
PPFIA4-213ENST00000601609 WDR63Q8IWG1 891 aa20.46■□□□□ 0.87
PPFIA4-213ENST00000601609 TSPYL6Q8N831 410 aa20.46■□□□□ 0.87
PPFIA4-213ENST00000601609 UTP14AQ9BVJ6 771 aaKnown RBP20.46■□□□□ 0.87
PPFIA4-213ENST00000601609 FANCIQ9NVI1 1328 aa20.46■□□□□ 0.87
PPFIA4-213ENST00000601609 NPR1P16066 1061 aa20.45■□□□□ 0.86
PPFIA4-213ENST00000601609 TWISTNBQ3B726 338 aaPredicted RBP20.45■□□□□ 0.86
PPFIA4-213ENST00000601609 ANKRD13DQ6ZTN6 518 aa20.45■□□□□ 0.86
PPFIA4-213ENST00000601609 PLBD2Q8NHP8 589 aa20.45■□□□□ 0.86
PPFIA4-213ENST00000601609 STK31Q9BXU1 1019 aa20.45■□□□□ 0.86
PPFIA4-213ENST00000601609 TNRC6CQ9HCJ0 1690 aaKnown RBP20.45■□□□□ 0.86
PPFIA4-213ENST00000601609 C21orf2O43822 256 aa20.44■□□□□ 0.86
PPFIA4-213ENST00000601609 NTSR2O95665 410 aa20.44■□□□□ 0.86
PPFIA4-213ENST00000601609 RASSF7Q02833 373 aa20.44■□□□□ 0.86
PPFIA4-213ENST00000601609 TCIRG1Q13488 830 aa20.44■□□□□ 0.86
PPFIA4-213ENST00000601609 C9orf131Q5VYM1 1079 aa20.44■□□□□ 0.86
PPFIA4-213ENST00000601609 PRPF40BQ6NWY9 871 aaKnown RBP20.44■□□□□ 0.86
PPFIA4-213ENST00000601609 RIC3Q7Z5B4 369 aa20.44■□□□□ 0.86
PPFIA4-213ENST00000601609 RPGRQ92834 1020 aaKnown RBP20.44■□□□□ 0.86
PPFIA4-213ENST00000601609 TCERG1O14776 1098 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms