RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 RGS12O14924 1447 aa11.5□□□□□ -0.57
FARP1-220ENST00000596613 SLIT2O94813 1529 aa11.5□□□□□ -0.57
FARP1-220ENST00000596613 QRICH2Q9H0J4 1663 aa11.49□□□□□ -0.57
FARP1-220ENST00000596613 SPDYE5A6NIY4 337 aa11.49□□□□□ -0.57
FARP1-220ENST00000596613 MTMR2Q13614 643 aa11.49□□□□□ -0.57
FARP1-220ENST00000596613 MORN1Q5T089 497 aa11.49□□□□□ -0.57
FARP1-220ENST00000596613 KRT27Q7Z3Y8 459 aa11.49□□□□□ -0.57
FARP1-220ENST00000596613 TTC21AQ8NDW8 1320 aa11.49□□□□□ -0.57
FARP1-220ENST00000596613 NRG2O14511 850 aaPredicted RBP11.48□□□□□ -0.57
FARP1-220ENST00000596613 TMF1P82094 1093 aa11.48□□□□□ -0.57
FARP1-220ENST00000596613 CHRNA2Q15822 529 aa11.48□□□□□ -0.57
FARP1-220ENST00000596613 SNRKQ9NRH2 765 aa11.48□□□□□ -0.57
FARP1-220ENST00000596613 KTN1Q86UP2 1357 aaKnown RBP11.48□□□□□ -0.57
FARP1-220ENST00000596613 KIAA0232Q92628 1395 aa11.48□□□□□ -0.57
FARP1-220ENST00000596613 RALGAPBQ86X10 1494 aa11.47□□□□□ -0.57
FARP1-220ENST00000596613 ST20-MTHFSA0A0A6YYL1 179 aa11.47□□□□□ -0.57
FARP1-220ENST00000596613 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
FARP1-220ENST00000596613 PDE3BQ13370 1112 aa11.47□□□□□ -0.57
FARP1-220ENST00000596613 USP35Q9P2H5 1018 aa11.47□□□□□ -0.57
FARP1-220ENST00000596613 SLC27A5Q9Y2P5 690 aa11.47□□□□□ -0.57
FARP1-220ENST00000596613 SBNO2Q9Y2G9 1366 aa11.46□□□□□ -0.57
FARP1-220ENST00000596613 TTC21BQ7Z4L5 1316 aa11.46□□□□□ -0.57
FARP1-220ENST00000596613 NR1I2O75469 434 aa11.46□□□□□ -0.57
FARP1-220ENST00000596613 AP1G2O75843 785 aa11.46□□□□□ -0.57
FARP1-220ENST00000596613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.46□□□□□ -0.573e-6■□□□□ 9.4
FARP1-220ENST00000596613 SYMPKQ92797 1274 aaKnown RBP11.46□□□□□ -0.57
FARP1-220ENST00000596613 TRPM3Q9HCF6 1732 aaPredicted RBP11.46□□□□□ -0.58
FARP1-220ENST00000596613 USP6P35125 1406 aa11.45□□□□□ -0.58
FARP1-220ENST00000596613 SPATA31A5Q5VU36 1347 aa11.45□□□□□ -0.58
FARP1-220ENST00000596613 SPATA31A7Q8IWB4 1347 aa11.45□□□□□ -0.58
FARP1-220ENST00000596613 CSB-PGBD3P0DP91 1061 aa11.45□□□□□ -0.58
FARP1-220ENST00000596613 THRAP3Q9Y2W1 955 aaKnown RBP11.45□□□□□ -0.58
FARP1-220ENST00000596613 COL14A1Q05707 1796 aaKnown RBP11.45□□□□□ -0.58
FARP1-220ENST00000596613 NWD2Q9ULI1 1742 aa11.45□□□□□ -0.58
FARP1-220ENST00000596613 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.44□□□□□ -0.58
FARP1-220ENST00000596613 ALS2Q96Q42 1657 aa11.44□□□□□ -0.58
FARP1-220ENST00000596613 C11orf95C9JLR9 678 aaPredicted RBP11.44□□□□□ -0.58
FARP1-220ENST00000596613 CLUAP1Q96AJ1 413 aa11.44□□□□□ -0.58
FARP1-220ENST00000596613 NINLQ9Y2I6 1382 aa11.43□□□□□ -0.58
FARP1-220ENST00000596613 USP19O94966 1318 aa11.43□□□□□ -0.58
FARP1-220ENST00000596613 TRAF7Q6Q0C0 670 aa11.43□□□□□ -0.58
FARP1-220ENST00000596613 TOM1L2Q6ZVM7 507 aa11.43□□□□□ -0.58
FARP1-220ENST00000596613 TCP11L2Q8N4U5 519 aa11.43□□□□□ -0.58
FARP1-220ENST00000596613 MTMR14Q8NCE2 650 aa11.43□□□□□ -0.58
FARP1-220ENST00000596613 SLC12A5Q9H2X9 1139 aa11.43□□□□□ -0.58
FARP1-220ENST00000596613 CPDO75976 1380 aa11.42□□□□□ -0.58
FARP1-220ENST00000596613 SPATA31A1Q5TZJ5 1347 aa11.42□□□□□ -0.58
FARP1-220ENST00000596613 CFAP99D6REC4 459 aa11.42□□□□□ -0.58
FARP1-220ENST00000596613 USP17L8P0C7I0 530 aa11.42□□□□□ -0.58
FARP1-220ENST00000596613 BAG6P46379 1132 aa11.42□□□□□ -0.58
FARP1-220ENST00000596613 Q3C1V9 767 aa11.42□□□□□ -0.58
FARP1-220ENST00000596613 TOPAZ1Q8N9V7 1692 aa11.42□□□□□ -0.58
FARP1-220ENST00000596613 PLCH1Q4KWH8 1693 aa11.41□□□□□ -0.58
FARP1-220ENST00000596613 A6NJR5 290 aa11.41□□□□□ -0.58
FARP1-220ENST00000596613 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
FARP1-220ENST00000596613 FAM196AQ6ZSG2 479 aa11.41□□□□□ -0.58
FARP1-220ENST00000596613 ANKLE1Q8NAG6 615 aa11.41□□□□□ -0.58
FARP1-220ENST00000596613 CDCA7Q9BWT1 371 aaPredicted RBP11.41□□□□□ -0.58
FARP1-220ENST00000596613 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
FARP1-220ENST00000596613 SLC19A1P41440 591 aa11.4□□□□□ -0.58
FARP1-220ENST00000596613 CTDSPL2Q05D32 466 aa11.4□□□□□ -0.58
FARP1-220ENST00000596613 LARP1Q6PKG0 1096 aaKnown RBP11.4□□□□□ -0.58
FARP1-220ENST00000596613 RETREG3Q86VR2 466 aa11.4□□□□□ -0.58
FARP1-220ENST00000596613 SCUBE3Q8IX30 993 aa11.4□□□□□ -0.58
FARP1-220ENST00000596613 HELBQ8NG08 1087 aaPredicted RBP11.4□□□□□ -0.58
FARP1-220ENST00000596613 TSC1Q92574 1164 aa11.4□□□□□ -0.58
FARP1-220ENST00000596613 POM121Q96HA1 1249 aa11.4□□□□□ -0.58
FARP1-220ENST00000596613 COG3Q96JB2 828 aa11.4□□□□□ -0.58
FARP1-220ENST00000596613 BLMP54132 1417 aaPredicted RBP11.4□□□□□ -0.58
FARP1-220ENST00000596613 AATKQ6ZMQ8 1374 aa11.4□□□□□ -0.59
FARP1-220ENST00000596613 USP47Q96K76 1375 aa11.4□□□□□ -0.59
FARP1-220ENST00000596613 ADH1BP00325 375 aa11.39□□□□□ -0.59
FARP1-220ENST00000596613 CPSF1Q10570 1443 aaKnown RBP11.39□□□□□ -0.59
FARP1-220ENST00000596613 RNF19BQ6ZMZ0 732 aa11.39□□□□□ -0.59
FARP1-220ENST00000596613 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
FARP1-220ENST00000596613 ABCA3Q99758 1704 aa11.39□□□□□ -0.59
FARP1-220ENST00000596613 POLR3GLQ9BT43 218 aa11.39□□□□□ -0.59
FARP1-220ENST00000596613 GLI3P10071 1580 aa11.38□□□□□ -0.59
FARP1-220ENST00000596613 SSH2Q76I76 1423 aa11.38□□□□□ -0.59
FARP1-220ENST00000596613 RAD21O60216 631 aa11.38□□□□□ -0.59
FARP1-220ENST00000596613 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
FARP1-220ENST00000596613 ARHGEF25Q86VW2 580 aa11.38□□□□□ -0.59
FARP1-220ENST00000596613 TESK2Q96S53 571 aa11.38□□□□□ -0.59
FARP1-220ENST00000596613 SALL2Q9Y467 1007 aaPredicted RBP11.38□□□□□ -0.59
FARP1-220ENST00000596613 EDC4Q6P2E9 1401 aaKnown RBP11.37□□□□□ -0.59
FARP1-220ENST00000596613 EXOC5O00471 708 aa11.37□□□□□ -0.59
FARP1-220ENST00000596613 TLL1O43897 1013 aa11.37□□□□□ -0.59
FARP1-220ENST00000596613 DDB1Q16531 1140 aa11.37□□□□□ -0.59
FARP1-220ENST00000596613 BRICD5Q6PL45 260 aa11.37□□□□□ -0.59
FARP1-220ENST00000596613 NME9Q86XW9 330 aa11.37□□□□□ -0.59
FARP1-220ENST00000596613 COG6Q9Y2V7 657 aa11.37□□□□□ -0.59
FARP1-220ENST00000596613 CRB1P82279 1406 aa11.36□□□□□ -0.59
FARP1-220ENST00000596613 PHRF1Q9P1Y6 1649 aaKnown RBP11.36□□□□□ -0.59
FARP1-220ENST00000596613 AMPHP49418 695 aa11.36□□□□□ -0.59
FARP1-220ENST00000596613 THAP11Q96EK4 314 aa11.36□□□□□ -0.59
FARP1-220ENST00000596613 USB1Q9BQ65 265 aaKnown RBP11.36□□□□□ -0.59
FARP1-220ENST00000596613 NLRP2Q9NX02 1062 aa11.36□□□□□ -0.59
FARP1-220ENST00000596613 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
FARP1-220ENST00000596613 APBB1O00213 710 aa11.35□□□□□ -0.59
FARP1-220ENST00000596613 S1PR4O95977 384 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms