RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 CHD4Q14839 1912 aa26.1■■□□□ 1.77
COPE-204ENST00000593827 CCDC184Q52MB2 194 aa26.09■■□□□ 1.77
COPE-204ENST00000593827 TPTE2Q6XPS3 522 aa26.09■■□□□ 1.77
COPE-204ENST00000593827 ZNF784Q8NCA9 323 aaPredicted RBP26.09■■□□□ 1.77
COPE-204ENST00000593827 CHMP4AQ9BY43 222 aa26.09■■□□□ 1.77
COPE-204ENST00000593827 NIP7Q9Y221 180 aaKnown RBP eCLIP26.09■■□□□ 1.77
COPE-204ENST00000593827 MAP3K15Q6ZN16 1313 aa26.09■■□□□ 1.77
COPE-204ENST00000593827 CHRNA5P30532 468 aa26.08■■□□□ 1.77
COPE-204ENST00000593827 PRR5LQ6MZQ0 368 aa26.08■■□□□ 1.77
COPE-204ENST00000593827 C2CD5Q86YS7 1000 aa26.08■■□□□ 1.77
COPE-204ENST00000593827 NCBP3Q53F19 620 aaKnown RBP26.07■■□□□ 1.76
COPE-204ENST00000593827 NRXN2Q9P2S2 1712 aa26.06■■□□□ 1.76
COPE-204ENST00000593827 ARHGAP27Q6ZUM4 889 aa26.06■■□□□ 1.76
COPE-204ENST00000593827 CCDC27Q2M243 656 aa26.05■■□□□ 1.76
COPE-204ENST00000593827 TTLL6Q8N841 843 aa26.05■■□□□ 1.76
COPE-204ENST00000593827 NYXQ9GZU5 481 aa26.05■■□□□ 1.76
COPE-204ENST00000593827 GTF2E1P29083 439 aaPredicted RBP26.04■■□□□ 1.76
COPE-204ENST00000593827 MBIPQ9NS73 344 aa26.04■■□□□ 1.76
COPE-204ENST00000593827 KIAA1551Q9HCM1 1747 aa26.03■■□□□ 1.76
COPE-204ENST00000593827 BCORQ6W2J9 1755 aa26.03■■□□□ 1.76
COPE-204ENST00000593827 N4BP2Q86UW6 1770 aaPredicted RBP26.03■■□□□ 1.76
COPE-204ENST00000593827 ZNF853P0CG23 659 aa26.03■■□□□ 1.76
COPE-204ENST00000593827 HLFQ16534 295 aa26.03■■□□□ 1.76
COPE-204ENST00000593827 HDGFL1Q5TGJ6 251 aa26.03■■□□□ 1.76
COPE-204ENST00000593827 DDX21Q9NR30 783 aaKnown RBP eCLIP26.03■■□□□ 1.76
COPE-204ENST00000593827 TTLL7Q6ZT98 887 aa26.02■■□□□ 1.76
COPE-204ENST00000593827 PDIA6Q15084 440 aa26.01■■□□□ 1.75
COPE-204ENST00000593827 DUSP27Q5VZP5 1158 aa26.01■■□□□ 1.75
COPE-204ENST00000593827 GIGYF2Q6Y7W6 1299 aaKnown RBP26.01■■□□□ 1.75
COPE-204ENST00000593827 ZBTB3Q9H5J0 574 aa26.01■■□□□ 1.75
COPE-204ENST00000593827 ATP10DQ9P241 1426 aa26.01■■□□□ 1.75
COPE-204ENST00000593827 DBF4Q9UBU7 674 aaPredicted RBP26.01■■□□□ 1.75
COPE-204ENST00000593827 AFDNP55196 1824 aaKnown RBP26■■□□□ 1.75
COPE-204ENST00000593827 HSP90AB3PQ58FF7 597 aa26■■□□□ 1.75
COPE-204ENST00000593827 NECTIN2Q92692 538 aa26■■□□□ 1.75
COPE-204ENST00000593827 ZNF622Q969S3 477 aaKnown RBP eCLIP26■■□□□ 1.75
COPE-204ENST00000593827 CNKSR1Q969H4 720 aa25.99■■□□□ 1.75
COPE-204ENST00000593827 KRT24Q2M2I5 525 aa25.98■■□□□ 1.75
COPE-204ENST00000593827 PARP10Q53GL7 1025 aa25.98■■□□□ 1.75
COPE-204ENST00000593827 STYK1Q6J9G0 422 aa25.98■■□□□ 1.75
COPE-204ENST00000593827 MASTLQ96GX5 879 aa25.98■■□□□ 1.75
COPE-204ENST00000593827 IBTKQ9P2D0 1353 aaPredicted RBP25.97■■□□□ 1.75
COPE-204ENST00000593827 COPS6Q7L5N1 327 aa25.97■■□□□ 1.75
COPE-204ENST00000593827 LRP10Q7Z4F1 713 aa25.97■■□□□ 1.75
COPE-204ENST00000593827 PPP1R42Q7Z4L9 355 aa25.97■■□□□ 1.75
COPE-204ENST00000593827 WWC1Q8IX03 1113 aa25.97■■□□□ 1.75
COPE-204ENST00000593827 CCDC24Q8N4L8 307 aa25.97■■□□□ 1.75
COPE-204ENST00000593827 HYPKQ9NX55 129 aa25.97■■□□□ 1.75
COPE-204ENST00000593827 IL16Q14005 1332 aa25.96■■□□□ 1.75
COPE-204ENST00000593827 FAM177BA6PVY3 158 aa25.96■■□□□ 1.75
COPE-204ENST00000593827 PROSER3Q2NL68 480 aa25.96■■□□□ 1.75
COPE-204ENST00000593827 XAGE3Q8WTP9 111 aa25.96■■□□□ 1.75
COPE-204ENST00000593827 SRGNP10124 158 aa25.95■■□□□ 1.74
COPE-204ENST00000593827 AIMP1Q12904 312 aaKnown RBP25.95■■□□□ 1.74
COPE-204ENST00000593827 SOGA3Q5TF21 947 aa25.95■■□□□ 1.74
COPE-204ENST00000593827 CHPF2Q9P2E5 772 aa25.95■■□□□ 1.74
COPE-204ENST00000593827 ANXA1P04083 346 aa25.94■■□□□ 1.74
COPE-204ENST00000593827 NPR1P16066 1061 aa25.94■■□□□ 1.74
COPE-204ENST00000593827 ZNF34Q8IZ26 560 aa25.94■■□□□ 1.74
COPE-204ENST00000593827 ADCY9O60503 1353 aa25.94■■□□□ 1.74
COPE-204ENST00000593827 BRCA1P38398 1863 aaKnown RBP25.94■■□□□ 1.74
COPE-204ENST00000593827 KLRG2A4D1S0 409 aaPredicted RBP25.93■■□□□ 1.74
COPE-204ENST00000593827 GPTP24298 496 aa25.93■■□□□ 1.74
COPE-204ENST00000593827 FAM9BQ8IZU0 186 aa25.93■■□□□ 1.74
COPE-204ENST00000593827 RNF123Q5XPI4 1314 aa25.92■■□□□ 1.74
COPE-204ENST00000593827 GPBP1L1Q9HC44 474 aaPredicted RBP25.92■■□□□ 1.74
COPE-204ENST00000593827 C1QTNF8P60827 252 aa25.91■■□□□ 1.74
COPE-204ENST00000593827 CCDC30Q5VVM6 783 aa25.91■■□□□ 1.74
COPE-204ENST00000593827 WDR63Q8IWG1 891 aa25.91■■□□□ 1.74
COPE-204ENST00000593827 ARFGEF1Q9Y6D6 1849 aa25.91■■□□□ 1.74
COPE-204ENST00000593827 ALDH1B1P30837 517 aa25.9■■□□□ 1.74
COPE-204ENST00000593827 C9orf131Q5VYM1 1079 aa25.9■■□□□ 1.74
COPE-204ENST00000593827 ANKRD13DQ6ZTN6 518 aa25.9■■□□□ 1.74
COPE-204ENST00000593827 PLBD2Q8NHP8 589 aa25.9■■□□□ 1.74
COPE-204ENST00000593827 UTP14AQ9BVJ6 771 aaKnown RBP25.9■■□□□ 1.74
COPE-204ENST00000593827 UBN2Q6ZU65 1347 aa25.89■■□□□ 1.74
COPE-204ENST00000593827 TCIRG1Q13488 830 aa25.89■■□□□ 1.74
COPE-204ENST00000593827 SUSD4Q5VX71 490 aa25.89■■□□□ 1.74
COPE-204ENST00000593827 ELL2O00472 640 aaPredicted RBP25.88■■□□□ 1.73
COPE-204ENST00000593827 PRPF40BQ6NWY9 871 aaKnown RBP25.88■■□□□ 1.73
COPE-204ENST00000593827 RIC1Q4ADV7 1423 aa25.88■■□□□ 1.73
COPE-204ENST00000593827 LMNB1P20700 586 aa25.87■■□□□ 1.73
COPE-204ENST00000593827 GOLGA2Q08379 1002 aa25.87■■□□□ 1.73
COPE-204ENST00000593827 ERFEQ4G0M1 354 aa25.87■■□□□ 1.73
COPE-204ENST00000593827 NUTM1Q86Y26 1132 aa25.87■■□□□ 1.73
COPE-204ENST00000593827 C8orf58Q8NAV2 365 aa25.87■■□□□ 1.73
COPE-204ENST00000593827 RNF181Q9P0P0 153 aa25.87■■□□□ 1.73
COPE-204ENST00000593827 DLEC1Q9Y238 1755 aa25.87■■□□□ 1.73
COPE-204ENST00000593827 SENP3-EIF4A1A0A087X0R7 540 aa25.86■■□□□ 1.73
COPE-204ENST00000593827 C21orf2O43822 256 aa25.86■■□□□ 1.73
COPE-204ENST00000593827 NTSR2O95665 410 aa25.86■■□□□ 1.73
COPE-204ENST00000593827 RPGRQ92834 1020 aaKnown RBP25.86■■□□□ 1.73
COPE-204ENST00000593827 ZC3H4Q9UPT8 1303 aaKnown RBP25.86■■□□□ 1.73
COPE-204ENST00000593827 DDX58O95786 925 aaKnown RBP25.85■■□□□ 1.73
COPE-204ENST00000593827 STK31Q9BXU1 1019 aa25.85■■□□□ 1.73
COPE-204ENST00000593827 ANKRD31Q8N7Z5 1873 aa25.85■■□□□ 1.73
COPE-204ENST00000593827 CRY2Q49AN0 593 aa25.84■■□□□ 1.73
COPE-204ENST00000593827 TSR2Q969E8 191 aaKnown RBP25.84■■□□□ 1.73
COPE-204ENST00000593827 NLRP3Q96P20 1036 aa25.84■■□□□ 1.73
COPE-204ENST00000593827 SALL2Q9Y467 1007 aaPredicted RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 1315.3 ms