RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 CYP19A1P11511 503 aaPredicted RBP18.58■□□□□ 0.57
GTF2F1-202ENST00000593678 NUCB1Q02818 461 aa18.58■□□□□ 0.57
GTF2F1-202ENST00000593678 ANKRD45Q5TZF3 282 aa18.58■□□□□ 0.57
GTF2F1-202ENST00000593678 ARXQ96QS3 562 aa18.58■□□□□ 0.57
GTF2F1-202ENST00000593678 DCTPP1Q9H773 170 aa18.58■□□□□ 0.57
GTF2F1-202ENST00000593678 ARFGEF2Q9Y6D5 1785 aa18.58■□□□□ 0.56
GTF2F1-202ENST00000593678 NBPF7P0C2Y1 421 aaPredicted RBP18.57■□□□□ 0.56
GTF2F1-202ENST00000593678 CHD1LQ86WJ1 897 aa18.57■□□□□ 0.56
GTF2F1-202ENST00000593678 NEURL1BA8MQ27 555 aa18.57■□□□□ 0.56
GTF2F1-202ENST00000593678 ATP8B2P98198 1209 aa18.57■□□□□ 0.56
GTF2F1-202ENST00000593678 SLC4A9Q96Q91 983 aa18.57■□□□□ 0.56
GTF2F1-202ENST00000593678 ZBTB3Q9H5J0 574 aa18.57■□□□□ 0.56
GTF2F1-202ENST00000593678 IBTKQ9P2D0 1353 aaPredicted RBP18.57■□□□□ 0.56
GTF2F1-202ENST00000593678 GCKRQ14397 625 aa18.56■□□□□ 0.56
GTF2F1-202ENST00000593678 TTLL7Q6ZT98 887 aa18.56■□□□□ 0.56
GTF2F1-202ENST00000593678 TJP1Q07157 1748 aa18.55■□□□□ 0.56
GTF2F1-202ENST00000593678 IGKV5-2P06315 115 aa18.55■□□□□ 0.56
GTF2F1-202ENST00000593678 LNPKQ9C0E8 428 aa18.54■□□□□ 0.56
GTF2F1-202ENST00000593678 AFDNP55196 1824 aaKnown RBP18.54■□□□□ 0.56
GTF2F1-202ENST00000593678 IL6STP40189 918 aaPredicted RBP18.54■□□□□ 0.56
GTF2F1-202ENST00000593678 CCDC87Q9NVE4 849 aa18.54■□□□□ 0.56
GTF2F1-202ENST00000593678 ZBTB1Q9Y2K1 713 aa18.54■□□□□ 0.56
GTF2F1-202ENST00000593678 UTYO14607 1347 aa18.53■□□□□ 0.56
GTF2F1-202ENST00000593678 NHSQ6T4R5 1651 aa18.53■□□□□ 0.56
GTF2F1-202ENST00000593678 SRGAP3O43295 1099 aa18.53■□□□□ 0.56
GTF2F1-202ENST00000593678 FAM182BQ5T319 152 aa18.53■□□□□ 0.56
GTF2F1-202ENST00000593678 ATP5J2-PTCD1G3V325 749 aa18.52■□□□□ 0.56
GTF2F1-202ENST00000593678 PPP1R42Q7Z4L9 355 aa18.52■□□□□ 0.56
GTF2F1-202ENST00000593678 CWC25Q9NXE8 425 aaPredicted RBP18.52■□□□□ 0.56
GTF2F1-202ENST00000593678 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.56
GTF2F1-202ENST00000593678 PNMA6EA0A0J9YXQ4 647 aa18.52■□□□□ 0.55
GTF2F1-202ENST00000593678 CRKLP46109 303 aaKnown RBP18.52■□□□□ 0.55
GTF2F1-202ENST00000593678 RBM6P78332 1123 aaKnown RBP18.52■□□□□ 0.55
GTF2F1-202ENST00000593678 HSP90AB3PQ58FF7 597 aa18.52■□□□□ 0.55
GTF2F1-202ENST00000593678 MAP3K15Q6ZN16 1313 aa18.51■□□□□ 0.55
GTF2F1-202ENST00000593678 CICQ96RK0 1608 aaPredicted RBP18.51■□□□□ 0.55
GTF2F1-202ENST00000593678 A0A087WZG4 1122 aa18.51■□□□□ 0.55
GTF2F1-202ENST00000593678 APBB1O00213 710 aa18.51■□□□□ 0.55
GTF2F1-202ENST00000593678 KRT27Q7Z3Y8 459 aa18.51■□□□□ 0.55
GTF2F1-202ENST00000593678 CCDC191Q8NCU4 936 aa18.51■□□□□ 0.55
GTF2F1-202ENST00000593678 SSH3Q8TE77 659 aa18.51■□□□□ 0.55
GTF2F1-202ENST00000593678 PDE4AP27815 886 aa18.5■□□□□ 0.55
GTF2F1-202ENST00000593678 FAM161AQ3B820 660 aa18.5■□□□□ 0.55
GTF2F1-202ENST00000593678 BTAF1O14981 1849 aa18.5■□□□□ 0.55
GTF2F1-202ENST00000593678 ZNF831Q5JPB2 1677 aa18.49■□□□□ 0.55
GTF2F1-202ENST00000593678 HSP90AB4PQ58FF6 505 aa18.49■□□□□ 0.55
GTF2F1-202ENST00000593678 FAM196AQ6ZSG2 479 aa18.49■□□□□ 0.55
GTF2F1-202ENST00000593678 DZIP3Q86Y13 1208 aaKnown RBP18.49■□□□□ 0.55
GTF2F1-202ENST00000593678 BCL11AQ9H165 835 aa18.49■□□□□ 0.55
GTF2F1-202ENST00000593678 TCIRG1Q13488 830 aa18.49■□□□□ 0.55
GTF2F1-202ENST00000593678 MTX1Q13505 466 aa18.49■□□□□ 0.55
GTF2F1-202ENST00000593678 ITPK1Q13572 414 aa18.49■□□□□ 0.55
GTF2F1-202ENST00000593678 UBE3BQ7Z3V4 1068 aa18.49■□□□□ 0.55
GTF2F1-202ENST00000593678 SUCLG2Q96I99 432 aa18.49■□□□□ 0.55
GTF2F1-202ENST00000593678 EXOC6BQ9Y2D4 811 aa18.49■□□□□ 0.55
GTF2F1-202ENST00000593678 POLA2Q14181 598 aa18.48■□□□□ 0.55
GTF2F1-202ENST00000593678 GIGYF2Q6Y7W6 1299 aaKnown RBP18.48■□□□□ 0.55
GTF2F1-202ENST00000593678 FBXO41Q8TF61 875 aa18.48■□□□□ 0.55
GTF2F1-202ENST00000593678 LRRCC1Q9C099 1032 aa18.48■□□□□ 0.55
GTF2F1-202ENST00000593678 ERVV-1B6SEH8 477 aa18.47■□□□□ 0.55
GTF2F1-202ENST00000593678 SURF6O75683 361 aaKnown RBP18.47■□□□□ 0.55
GTF2F1-202ENST00000593678 OS9Q13438 667 aaPredicted RBP18.47■□□□□ 0.55
GTF2F1-202ENST00000593678 INTS5Q6P9B9 1019 aaKnown RBP18.47■□□□□ 0.55
GTF2F1-202ENST00000593678 BICC1Q9H694 974 aaKnown RBP18.47■□□□□ 0.55
GTF2F1-202ENST00000593678 RAB11FIP3O75154 756 aa18.46■□□□□ 0.55
GTF2F1-202ENST00000593678 EIF5P55010 431 aaKnown RBP18.46■□□□□ 0.55
GTF2F1-202ENST00000593678 BACH2Q9BYV9 841 aa18.46■□□□□ 0.55
GTF2F1-202ENST00000593678 BCL11BQ9C0K0 894 aaPredicted RBP18.46■□□□□ 0.55
GTF2F1-202ENST00000593678 CCNL1Q9UK58 526 aaPredicted RBP18.46■□□□□ 0.55
GTF2F1-202ENST00000593678 SBF2Q86WG5 1849 aa18.46■□□□□ 0.55
GTF2F1-202ENST00000593678 TBC1D2BQ9UPU7 963 aa18.46■□□□□ 0.55
GTF2F1-202ENST00000593678 RBM19Q9Y4C8 960 aaKnown RBP18.46■□□□□ 0.55
GTF2F1-202ENST00000593678 RXRBP28702 533 aa18.45■□□□□ 0.54
GTF2F1-202ENST00000593678 TRIM28Q13263 835 aaKnown RBP18.45■□□□□ 0.54
GTF2F1-202ENST00000593678 PTF1AQ7RTS3 328 aa18.45■□□□□ 0.54
GTF2F1-202ENST00000593678 ISCA1Q9BUE6 129 aa18.45■□□□□ 0.54
GTF2F1-202ENST00000593678 COL5A3P25940 1745 aaPredicted RBP18.44■□□□□ 0.54
GTF2F1-202ENST00000593678 COL15A1P39059 1388 aa18.44■□□□□ 0.54
GTF2F1-202ENST00000593678 H7C1W4 665 aa18.44■□□□□ 0.54
GTF2F1-202ENST00000593678 CNTNAP4Q9C0A0 1308 aa18.44■□□□□ 0.54
GTF2F1-202ENST00000593678 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
GTF2F1-202ENST00000593678 RREB1Q92766 1687 aa18.43■□□□□ 0.54
GTF2F1-202ENST00000593678 BRWD3Q6RI45 1802 aa18.43■□□□□ 0.54
GTF2F1-202ENST00000593678 SMARCA5O60264 1052 aaPredicted RBP18.43■□□□□ 0.54
GTF2F1-202ENST00000593678 LINC00116Q8NCU8 138 aa18.43■□□□□ 0.54
GTF2F1-202ENST00000593678 ZNF652Q9Y2D9 606 aa18.43■□□□□ 0.54
GTF2F1-202ENST00000593678 HLFQ16534 295 aa18.42■□□□□ 0.54
GTF2F1-202ENST00000593678 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
GTF2F1-202ENST00000593678 JARID2Q92833 1246 aaPredicted RBP18.42■□□□□ 0.54
GTF2F1-202ENST00000593678 KIF1BPQ96EK5 621 aa18.42■□□□□ 0.54
GTF2F1-202ENST00000593678 KAZALD1Q96I82 304 aa18.42■□□□□ 0.54
GTF2F1-202ENST00000593678 GPTP24298 496 aa18.41■□□□□ 0.54
GTF2F1-202ENST00000593678 HMGB2P26583 209 aaKnown RBP18.41■□□□□ 0.54
GTF2F1-202ENST00000593678 RC3H1Q5TC82 1133 aaKnown RBP18.41■□□□□ 0.54
GTF2F1-202ENST00000593678 ANKRD36CQ5JPF3 1778 aa18.41■□□□□ 0.54
GTF2F1-202ENST00000593678 G3BP1Q13283 466 aaKnown RBP eCLIP18.4■□□□□ 0.541e-8■■■■■ 33.6
GTF2F1-202ENST00000593678 NOP58Q9Y2X3 529 aaKnown RBP18.4■□□□□ 0.54
GTF2F1-202ENST00000593678 CHMP3Q9Y3E7 222 aa18.4■□□□□ 0.54
GTF2F1-202ENST00000593678 MYH14Q7Z406 1995 aaKnown RBP18.4■□□□□ 0.54
GTF2F1-202ENST00000593678 NUP98P52948 1817 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms