RNA–Protein interactions for RNA: ENST00000588162.1

TXNL4A-208, Transcript of thioredoxin like 4A, human

TSL 2 BASIC

Gene TXNL4A, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TXNL4A-208	ENST00000588162	PIP4K2A	P48426	406 aa	Predicted RBP	32.58	■■■□□ 2.81
TXNL4A-208	ENST00000588162	PDIA6	Q15084	440 aa		32.57	■■■□□ 2.8
TXNL4A-208	ENST00000588162	COL15A1	P39059	1388 aa		32.56	■■■□□ 2.8
TXNL4A-208	ENST00000588162	RFC4	P35249	363 aa		32.55	■■■□□ 2.8
TXNL4A-208	ENST00000588162	HSPA6	P17066	643 aa		32.54	■■■□□ 2.8
TXNL4A-208	ENST00000588162	ZNF526	Q8TF50	670 aa	Predicted RBP	32.54	■■■□□ 2.8
TXNL4A-208	ENST00000588162	ARHGEF1	Q92888	912 aa	Known RBP	32.54	■■■□□ 2.8
TXNL4A-208	ENST00000588162	SLC4A2	P04920	1241 aa		32.53	■■■□□ 2.8
TXNL4A-208	ENST00000588162	ALDH1L2	Q3SY69	923 aa		32.53	■■■□□ 2.8
TXNL4A-208	ENST00000588162	AMIGO3	Q86WK7	504 aa		32.53	■■■□□ 2.8
TXNL4A-208	ENST00000588162	TCERG1	O14776	1098 aa	Known RBP	32.52	■■■□□ 2.8
TXNL4A-208	ENST00000588162	ANXA1	P04083	346 aa		32.52	■■■□□ 2.8
TXNL4A-208	ENST00000588162	PROSER3	Q2NL68	480 aa		32.52	■■■□□ 2.8
TXNL4A-208	ENST00000588162	ZPR1	O75312	459 aa		32.51	■■■□□ 2.79
TXNL4A-208	ENST00000588162	KIF6	Q6ZMV9	814 aa		32.5	■■■□□ 2.79
TXNL4A-208	ENST00000588162	SMIM5	Q71RC9	77 aa		32.5	■■■□□ 2.79
TXNL4A-208	ENST00000588162	DZIP3	Q86Y13	1208 aa	Known RBP	32.5	■■■□□ 2.79
TXNL4A-208	ENST00000588162	NARF	Q9UHQ1	456 aa		32.49	■■■□□ 2.79
TXNL4A-208	ENST00000588162	COPS6	Q7L5N1	327 aa		32.48	■■■□□ 2.79
TXNL4A-208	ENST00000588162	LRP10	Q7Z4F1	713 aa		32.48	■■■□□ 2.79
TXNL4A-208	ENST00000588162	WWC3	Q9ULE0	1092 aa		32.48	■■■□□ 2.79
TXNL4A-208	ENST00000588162	TBC1D2B	Q9UPU7	963 aa		32.48	■■■□□ 2.79
TXNL4A-208	ENST00000588162	C4A	P0C0L4	1744 aa		32.48	■■■□□ 2.79
TXNL4A-208	ENST00000588162	AIMP1	Q12904	312 aa	Known RBP	32.47	■■■□□ 2.79
TXNL4A-208	ENST00000588162	XAGE3	Q8WTP9	111 aa		32.47	■■■□□ 2.79
TXNL4A-208	ENST00000588162	SSH1	Q8WYL5	1049 aa		32.46	■■■□□ 2.79
TXNL4A-208	ENST00000588162	SMC4	Q9NTJ3	1288 aa		32.46	■■■□□ 2.79
TXNL4A-208	ENST00000588162	DDX58	O95786	925 aa	Known RBP	32.45	■■■□□ 2.79
TXNL4A-208	ENST00000588162	RARS	P54136	660 aa	Known RBP	32.45	■■■□□ 2.79
TXNL4A-208	ENST00000588162	MRPL50	Q8N5N7	158 aa	Known RBP	32.44	■■■□□ 2.78
TXNL4A-208	ENST00000588162	PHAX	Q9H814	394 aa	Known RBP	32.44	■■■□□ 2.78
TXNL4A-208	ENST00000588162	USP42	Q9H9J4	1324 aa	Known RBP	32.44	■■■□□ 2.78
TXNL4A-208	ENST00000588162	TTLL7	Q6ZT98	887 aa		32.43	■■■□□ 2.78
TXNL4A-208	ENST00000588162	ERVV-1	B6SEH8	477 aa		32.42	■■■□□ 2.78
TXNL4A-208	ENST00000588162	RGL2	O15211	777 aa		32.42	■■■□□ 2.78
TXNL4A-208	ENST00000588162	USPL1	Q5W0Q7	1092 aa		32.42	■■■□□ 2.78
TXNL4A-208	ENST00000588162	ZNF652	Q9Y2D9	606 aa		32.42	■■■□□ 2.78
TXNL4A-208	ENST00000588162	MAP3K15	Q6ZN16	1313 aa		32.42	■■■□□ 2.78
TXNL4A-208	ENST00000588162	FLII	Q13045	1269 aa		32.41	■■■□□ 2.78
TXNL4A-208	ENST00000588162	ANKRD13D	Q6ZTN6	518 aa		32.41	■■■□□ 2.78
TXNL4A-208	ENST00000588162	SRP68	Q9UHB9	627 aa	Known RBP	32.41	■■■□□ 2.78
TXNL4A-208	ENST00000588162	CAMTA2	O94983	1202 aa		32.4	■■■□□ 2.78
TXNL4A-208	ENST00000588162	PLBD2	Q8NHP8	589 aa		32.4	■■■□□ 2.78
TXNL4A-208	ENST00000588162	BCL2L13	Q9BXK5	485 aa		32.4	■■■□□ 2.78
TXNL4A-208	ENST00000588162	KIF3C	O14782	793 aa		32.39	■■■□□ 2.78
TXNL4A-208	ENST00000588162	BRPF1	P55201	1214 aa	Predicted RBP	32.39	■■■□□ 2.78
TXNL4A-208	ENST00000588162	CLEC4G	Q6UXB4	293 aa		32.39	■■■□□ 2.78
TXNL4A-208	ENST00000588162	G2E3	Q7L622	706 aa		32.39	■■■□□ 2.78
TXNL4A-208	ENST00000588162	NLGN1	Q8N2Q7	840 aa		32.39	■■■□□ 2.78
TXNL4A-208	ENST00000588162	BCOR	Q6W2J9	1755 aa		32.38	■■■□□ 2.77
TXNL4A-208	ENST00000588162	RIC3	Q7Z5B4	369 aa		32.38	■■■□□ 2.77
TXNL4A-208	ENST00000588162	ZBTB3	Q9H5J0	574 aa		32.38	■■■□□ 2.77
TXNL4A-208	ENST00000588162	SCN7A	Q01118	1682 aa		32.37	■■■□□ 2.77
TXNL4A-208	ENST00000588162	GYS1	P13807	737 aa		32.37	■■■□□ 2.77
TXNL4A-208	ENST00000588162	FKBP5	Q13451	457 aa	Predicted RBP	32.37	■■■□□ 2.77
TXNL4A-208	ENST00000588162	RCAN3	Q9UKA8	241 aa		32.37	■■■□□ 2.77
TXNL4A-208	ENST00000588162	NUP98	P52948	1817 aa		32.35	■■■□□ 2.77
TXNL4A-208	ENST00000588162	PTPRC	P08575	1304 aa		32.35	■■■□□ 2.77
TXNL4A-208	ENST00000588162	KIF16B	Q96L93	1317 aa		32.35	■■■□□ 2.77
TXNL4A-208	ENST00000588162	KSR2	Q6VAB6	950 aa		32.35	■■■□□ 2.77
TXNL4A-208	ENST00000588162	HSP90AB3P	Q58FF7	597 aa		32.34	■■■□□ 2.77
TXNL4A-208	ENST00000588162	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.34	■■■□□ 2.77
TXNL4A-208	ENST00000588162	IPO8	O15397	1037 aa	Known RBP	32.33	■■■□□ 2.77
TXNL4A-208	ENST00000588162	BCAR3	O75815	825 aa		32.32	■■■□□ 2.76
TXNL4A-208	ENST00000588162	HLF	Q16534	295 aa		32.32	■■■□□ 2.76
TXNL4A-208	ENST00000588162	BCL2L12	Q9HB09	334 aa		32.32	■■■□□ 2.76
TXNL4A-208	ENST00000588162	PI4KAP2	A4QPH2	592 aa		32.31	■■■□□ 2.76
TXNL4A-208	ENST00000588162	FKBP8	Q14318	412 aa		32.31	■■■□□ 2.76
TXNL4A-208	ENST00000588162	PI4KAP1	Q8N8J0	262 aa		32.31	■■■□□ 2.76
TXNL4A-208	ENST00000588162	NOB1	Q9ULX3	412 aa	Known RBP	32.31	■■■□□ 2.76
TXNL4A-208	ENST00000588162	ARFGEF2	Q9Y6D5	1785 aa		32.31	■■■□□ 2.76
TXNL4A-208	ENST00000588162	MMP10	P09238	476 aa		32.3	■■■□□ 2.76
TXNL4A-208	ENST00000588162	MAP3K2	Q9Y2U5	619 aa		32.3	■■■□□ 2.76
TXNL4A-208	ENST00000588162	ARHGAP45	Q92619	1136 aa		32.29	■■■□□ 2.76
TXNL4A-208	ENST00000588162	NEXN	Q0ZGT2	675 aa		32.28	■■■□□ 2.76
TXNL4A-208	ENST00000588162	TCIRG1	Q13488	830 aa		32.28	■■■□□ 2.76
TXNL4A-208	ENST00000588162	SETDB2	Q96T68	719 aa		32.28	■■■□□ 2.76
TXNL4A-208	ENST00000588162	API5	Q9BZZ5	524 aa	Known RBP	32.28	■■■□□ 2.76
TXNL4A-208	ENST00000588162	DNAAF4	Q8WXU2	420 aa		32.27	■■■□□ 2.76
TXNL4A-208	ENST00000588162	FRAT1	Q92837	279 aa	Predicted RBP	32.27	■■■□□ 2.76
TXNL4A-208	ENST00000588162	PXDNL	A1KZ92	1463 aa		32.27	■■■□□ 2.76
TXNL4A-208	ENST00000588162	ANKRD36C	Q5JPF3	1778 aa		32.27	■■■□□ 2.76
TXNL4A-208	ENST00000588162	TBC1D9B	Q66K14	1250 aa		32.26	■■■□□ 2.75
TXNL4A-208	ENST00000588162	METTL22	Q9BUU2	404 aa	Predicted RBP	32.26	■■■□□ 2.75
TXNL4A-208	ENST00000588162	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.26	■■■□□ 2.75
TXNL4A-208	ENST00000588162	TM4SF1	P30408	202 aa		32.25	■■■□□ 2.75
TXNL4A-208	ENST00000588162	APLP1	P51693	650 aa		32.25	■■■□□ 2.75
TXNL4A-208	ENST00000588162	TGFB2	P61812	414 aa		32.25	■■■□□ 2.75
TXNL4A-208	ENST00000588162	BICDL1	Q6ZP65	573 aa		32.25	■■■□□ 2.75
TXNL4A-208	ENST00000588162	NFIX	Q14938	502 aa		32.24	■■■□□ 2.75
TXNL4A-208	ENST00000588162	ZKSCAN2	Q63HK3	967 aa		32.23	■■■□□ 2.75
TXNL4A-208	ENST00000588162	ZNF34	Q8IZ26	560 aa		32.23	■■■□□ 2.75
TXNL4A-208	ENST00000588162	MYD88	Q99836	296 aa		32.23	■■■□□ 2.75
TXNL4A-208	ENST00000588162	BCS1L	Q9Y276	419 aa		32.23	■■■□□ 2.75
TXNL4A-208	ENST00000588162	PARP3	Q9Y6F1	533 aa		32.23	■■■□□ 2.75
TXNL4A-208	ENST00000588162	TOMM70	O94826	608 aa		32.22	■■■□□ 2.75
TXNL4A-208	ENST00000588162	PARP10	Q53GL7	1025 aa		32.22	■■■□□ 2.75
TXNL4A-208	ENST00000588162	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.22	■■■□□ 2.75
TXNL4A-208	ENST00000588162		A0A0G2JLW4	131 aa		32.21	■■■□□ 2.75
TXNL4A-208	ENST00000588162		F6X3S4	739 aa		32.21	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms