RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	RABEP1	Q15276	862 aa		11.41	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	EP400NL	Q6ZTU2	488 aa		11.41	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	CCDC27	Q2M243	656 aa		11.41	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	LARP1	Q6PKG0	1096 aa	Known RBP	11.41	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	USHBP1	Q8N6Y0	703 aa		11.41	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	LRP6	O75581	1613 aa		11.41	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	EIF4A2	Q14240	407 aa	Known RBP	11.4	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	APBB1	O00213	710 aa		11.4	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	RIOK3	O14730	519 aa	Known RBP	11.4	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	UNC5CL	Q8IV45	518 aa		11.4	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	NFAT5	O94916	1531 aa		11.4	□□□□□ -0.58
CACNA2D4-223	ENST00000588077	GADD45B	O75293	160 aa	Predicted RBP	11.4	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	LMOD3	Q0VAK6	560 aa		11.4	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	BANK1	Q8NDB2	785 aa		11.4	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	SMARCA5	O60264	1052 aa	Predicted RBP	11.39	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	HMOX1	P09601	288 aa		11.39	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	SIRT2	Q8IXJ6	389 aa		11.39	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	ERBB3	P21860	1342 aa		11.39	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	RTL1	A6NKG5	1358 aa		11.39	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	ADCY5	O95622	1261 aa		11.39	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.39	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	FEZ1	Q99689	392 aa		11.39	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	QTRT2	Q9H974	415 aa	Known RBP	11.39	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	OGFR	Q9NZT2	677 aa		11.39	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	TULP2	O00295	520 aa		11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	USP26	Q9BXU7	913 aa		11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	KIF24	Q5T7B8	1368 aa		11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	ELL2	O00472	640 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	SLFN14	P0C7P3	912 aa		11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	NAA30	Q147X3	362 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	ZNF772	Q68DY9	489 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	SULT6B1	Q6IMI4	303 aa		11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	EFCC1	Q9HA90	598 aa		11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	WDR17	Q8IZU2	1322 aa		11.38	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	HCLS1	P14317	486 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	FKBP5	Q13451	457 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	EYA1	Q99502	592 aa		11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	TRPC5	Q9UL62	973 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	PYCARD	Q9ULZ3	195 aa		11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	TRIM35	Q9UPQ4	493 aa		11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	GTF2A1	P52655	376 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	NBPF6	Q5VWK0	638 aa		11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	RAPGEF4	Q8WZA2	1011 aa		11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	NBPF4	Q96M43	638 aa		11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	COL3A1	P02461	1466 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	IL13	P35225	146 aa		11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	SPC24	Q8NBT2	197 aa		11.37	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	CAMTA1	Q9Y6Y1	1673 aa		11.36	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	MAP2	P11137	1827 aa	Known RBP	11.36	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	TMPO	P42166	694 aa	Known RBP	11.36	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.36	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	ZBTB7B	O15156	539 aa	Predicted RBP	11.35	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	ST18	O60284	1047 aa		11.35	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	PLEKHM2	Q8IWE5	1019 aa		11.35	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	TMX1	Q9H3N1	280 aa		11.35	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	CWC22	Q9HCG8	908 aa	Known RBP	11.35	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	MBD3	O95983	291 aa		11.35	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	FAM98C	Q17RN3	349 aa	Known RBP	11.35	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.35	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	IPO8	O15397	1037 aa	Known RBP	11.35	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	DTNB	O60941	627 aa		11.35	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	CARD10	Q9BWT7	1032 aa		11.35	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	COL5A2	P05997	1499 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	VPS72	Q15906	364 aa		11.34	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	GCC1	Q96CN9	775 aa		11.34	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	RSPH14	Q9UHP6	348 aa		11.34	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	MARF1	Q9Y4F3	1742 aa	Known RBP	11.34	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	TAT	P17735	454 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	ADRA2B	P18089	450 aa		11.34	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	NEK4	P51957	841 aa		11.34	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	GJD4	Q96KN9	370 aa	Predicted RBP	11.34	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	KCNF1	Q9H3M0	494 aa		11.34	□□□□□ -0.59
CACNA2D4-223	ENST00000588077	LTN1	O94822	1766 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	ABCA3	Q99758	1704 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	AP5Z1	O43299	807 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	TERF2	Q15554	542 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	GRIPAP1	Q4V328	841 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	ANKRD7	Q92527	254 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	TMX3	Q96JJ7	454 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	MYCBP	Q99417	103 aa	Predicted RBP	11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	SPTLC3	Q9NUV7	552 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	SLIT2	O94813	1529 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	PRKAR2B	P31323	418 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	THUMPD2	Q9BTF0	503 aa	Known RBP	11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	COL14A1	Q05707	1796 aa	Known RBP	11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	BCL9L	Q86UU0	1499 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	CRB1	P82279	1406 aa		11.33	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	USP48	Q86UV5	1035 aa		11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	USP54	Q70EL1	1684 aa		11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	CT47B1	P0C2W7	299 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	IL2RB	P14784	551 aa		11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	SDS	P20132	328 aa		11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	RXRB	P28702	533 aa		11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	NCBP1	Q09161	790 aa	Known RBP	11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms