RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 CCDC27Q2M243 656 aa28.15■■■□□ 2.1
R3HDM4-202ENST00000586080 PROSER3Q2NL68 480 aa28.15■■■□□ 2.1
R3HDM4-202ENST00000586080 HDGFL1Q5TGJ6 251 aa28.15■■■□□ 2.1
R3HDM4-202ENST00000586080 WWC1Q8IX03 1113 aa28.15■■■□□ 2.1
R3HDM4-202ENST00000586080 CCDC24Q8N4L8 307 aa28.15■■■□□ 2.1
R3HDM4-202ENST00000586080 ZBTB3Q9H5J0 574 aa28.15■■■□□ 2.1
R3HDM4-202ENST00000586080 NIP7Q9Y221 180 aaKnown RBP eCLIP28.15■■■□□ 2.1
R3HDM4-202ENST00000586080 MAP3K15Q6ZN16 1313 aa28.15■■■□□ 2.1
R3HDM4-202ENST00000586080 PDIA6Q15084 440 aa28.14■■■□□ 2.1
R3HDM4-202ENST00000586080 DUSP27Q5VZP5 1158 aa28.14■■■□□ 2.1
R3HDM4-202ENST00000586080 CNBD1Q8NA66 436 aa28.14■■■□□ 2.1
R3HDM4-202ENST00000586080 HOXB7P09629 217 aa28.13■■■□□ 2.09
R3HDM4-202ENST00000586080 PRR5LQ6MZQ0 368 aa28.13■■■□□ 2.09
R3HDM4-202ENST00000586080 N4BP2Q86UW6 1770 aaPredicted RBP28.13■■■□□ 2.09
R3HDM4-202ENST00000586080 KIAA1551Q9HCM1 1747 aa28.12■■■□□ 2.09
R3HDM4-202ENST00000586080 FAM177BA6PVY3 158 aa28.12■■■□□ 2.09
R3HDM4-202ENST00000586080 RGL2O15211 777 aa28.12■■■□□ 2.09
R3HDM4-202ENST00000586080 NBPF5PQ86XG9 351 aaPredicted RBP28.12■■■□□ 2.09
R3HDM4-202ENST00000586080 ERVV-1B6SEH8 477 aa28.11■■■□□ 2.09
R3HDM4-202ENST00000586080 ELL2O00472 640 aaPredicted RBP28.11■■■□□ 2.09
R3HDM4-202ENST00000586080 ST5P78524 1137 aa28.11■■■□□ 2.09
R3HDM4-202ENST00000586080 PIM2Q9P1W9 311 aa28.11■■■□□ 2.09
R3HDM4-202ENST00000586080 CHPF2Q9P2E5 772 aa28.11■■■□□ 2.09
R3HDM4-202ENST00000586080 NRXN2Q9P2S2 1712 aa28.11■■■□□ 2.09
R3HDM4-202ENST00000586080 AFDNP55196 1824 aaKnown RBP28.11■■■□□ 2.09
R3HDM4-202ENST00000586080 KCNA3P22001 575 aa28.1■■■□□ 2.09
R3HDM4-202ENST00000586080 AIMP1Q12904 312 aaKnown RBP28.1■■■□□ 2.09
R3HDM4-202ENST00000586080 TSR2Q969E8 191 aaKnown RBP28.1■■■□□ 2.09
R3HDM4-202ENST00000586080 LRP10Q7Z4F1 713 aa28.09■■■□□ 2.09
R3HDM4-202ENST00000586080 C2CD5Q86YS7 1000 aa28.09■■■□□ 2.09
R3HDM4-202ENST00000586080 DDX21Q9NR30 783 aaKnown RBP eCLIP28.09■■■□□ 2.09
R3HDM4-202ENST00000586080 DALRD3Q5D0E6 543 aaKnown RBP28.08■■■□□ 2.09
R3HDM4-202ENST00000586080 XAGE3Q8WTP9 111 aa28.08■■■□□ 2.09
R3HDM4-202ENST00000586080 GPTP24298 496 aa28.07■■■□□ 2.08
R3HDM4-202ENST00000586080 NCBP3Q53F19 620 aaKnown RBP28.07■■■□□ 2.08
R3HDM4-202ENST00000586080 COPS6Q7L5N1 327 aa28.07■■■□□ 2.08
R3HDM4-202ENST00000586080 BRIP1Q9BX63 1249 aa28.07■■■□□ 2.08
R3HDM4-202ENST00000586080 H0YIN7 160 aa28.06■■■□□ 2.08
R3HDM4-202ENST00000586080 PDE6BP35913 854 aa28.06■■■□□ 2.08
R3HDM4-202ENST00000586080 C8orf58Q8NAV2 365 aa28.06■■■□□ 2.08
R3HDM4-202ENST00000586080 IL16Q14005 1332 aa28.05■■■□□ 2.08
R3HDM4-202ENST00000586080 DBF4Q9UBU7 674 aaPredicted RBP28.05■■■□□ 2.08
R3HDM4-202ENST00000586080 ATP10DQ9P241 1426 aa28.04■■■□□ 2.08
R3HDM4-202ENST00000586080 GTF2E1P29083 439 aaPredicted RBP28.04■■■□□ 2.08
R3HDM4-202ENST00000586080 TPTE2Q6XPS3 522 aa28.04■■■□□ 2.08
R3HDM4-202ENST00000586080 GIGYF2Q6Y7W6 1299 aaKnown RBP28.04■■■□□ 2.08
R3HDM4-202ENST00000586080 ARHGAP27Q6ZUM4 889 aa28.02■■■□□ 2.08
R3HDM4-202ENST00000586080 ZNF622Q969S3 477 aaKnown RBP eCLIP28.02■■■□□ 2.08
R3HDM4-202ENST00000586080 WDR63Q8IWG1 891 aa28.01■■■□□ 2.07
R3HDM4-202ENST00000586080 NYXQ9GZU5 481 aa28.01■■■□□ 2.07
R3HDM4-202ENST00000586080 HYPKQ9NX55 129 aa28.01■■■□□ 2.07
R3HDM4-202ENST00000586080 UBN2Q6ZU65 1347 aa28■■■□□ 2.07
R3HDM4-202ENST00000586080 TSPYL6Q8N831 410 aa28■■■□□ 2.07
R3HDM4-202ENST00000586080 TTLL6Q8N841 843 aa28■■■□□ 2.07
R3HDM4-202ENST00000586080 PDZRN3Q9UPQ7 1066 aa28■■■□□ 2.07
R3HDM4-202ENST00000586080 CCER2I3L3R5 266 aa27.99■■■□□ 2.07
R3HDM4-202ENST00000586080 NUTM1Q86Y26 1132 aa27.99■■■□□ 2.07
R3HDM4-202ENST00000586080 FANCIQ9NVI1 1328 aa27.98■■■□□ 2.07
R3HDM4-202ENST00000586080 DIEXFQ68CQ4 756 aaKnown RBP27.98■■■□□ 2.07
R3HDM4-202ENST00000586080 ZNF34Q8IZ26 560 aa27.98■■■□□ 2.07
R3HDM4-202ENST00000586080 HSP90AB3PQ58FF7 597 aa27.97■■■□□ 2.07
R3HDM4-202ENST00000586080 CCDC30Q5VVM6 783 aa27.97■■■□□ 2.07
R3HDM4-202ENST00000586080 SUSD4Q5VX71 490 aa27.97■■■□□ 2.07
R3HDM4-202ENST00000586080 CHMP4AQ9BY43 222 aa27.97■■■□□ 2.07
R3HDM4-202ENST00000586080 CHD4Q14839 1912 aa27.96■■■□□ 2.07
R3HDM4-202ENST00000586080 BRCA1P38398 1863 aaKnown RBP27.96■■■□□ 2.07
R3HDM4-202ENST00000586080 PARP10Q53GL7 1025 aa27.96■■■□□ 2.07
R3HDM4-202ENST00000586080 ANKRD31Q8N7Z5 1873 aa27.95■■■□□ 2.07
R3HDM4-202ENST00000586080 TWISTNBQ3B726 338 aaPredicted RBP27.95■■■□□ 2.06
R3HDM4-202ENST00000586080 ERFEQ4G0M1 354 aa27.95■■■□□ 2.06
R3HDM4-202ENST00000586080 PPP1R42Q7Z4L9 355 aa27.95■■■□□ 2.06
R3HDM4-202ENST00000586080 ABCC12Q96J65 1359 aa27.95■■■□□ 2.06
R3HDM4-202ENST00000586080 ANKRD13DQ6ZTN6 518 aa27.94■■■□□ 2.06
R3HDM4-202ENST00000586080 ZNF784Q8NCA9 323 aaPredicted RBP27.94■■■□□ 2.06
R3HDM4-202ENST00000586080 PLBD2Q8NHP8 589 aa27.94■■■□□ 2.06
R3HDM4-202ENST00000586080 ZNF219Q9P2Y4 722 aaPredicted RBP27.94■■■□□ 2.06
R3HDM4-202ENST00000586080 IBTKQ9P2D0 1353 aaPredicted RBP27.94■■■□□ 2.06
R3HDM4-202ENST00000586080 NUP98P52948 1817 aa27.94■■■□□ 2.06
R3HDM4-202ENST00000586080 TCERG1O14776 1098 aaKnown RBP27.93■■■□□ 2.06
R3HDM4-202ENST00000586080 NTSR2O95665 410 aa27.93■■■□□ 2.06
R3HDM4-202ENST00000586080 SRGNP10124 158 aa27.93■■■□□ 2.06
R3HDM4-202ENST00000586080 GOLGA2Q08379 1002 aa27.93■■■□□ 2.06
R3HDM4-202ENST00000586080 MASTLQ96GX5 879 aa27.93■■■□□ 2.06
R3HDM4-202ENST00000586080 PHAXQ9H814 394 aaKnown RBP27.93■■■□□ 2.06
R3HDM4-202ENST00000586080 COL11A2P13942 1736 aaPredicted RBP27.92■■■□□ 2.06
R3HDM4-202ENST00000586080 TCIRG1Q13488 830 aa27.92■■■□□ 2.06
R3HDM4-202ENST00000586080 STYK1Q6J9G0 422 aa27.92■■■□□ 2.06
R3HDM4-202ENST00000586080 UTP14AQ9BVJ6 771 aaKnown RBP27.92■■■□□ 2.06
R3HDM4-202ENST00000586080 STK31Q9BXU1 1019 aa27.92■■■□□ 2.06
R3HDM4-202ENST00000586080 MYH16Q9H6N6 1097 aa27.92■■■□□ 2.06
R3HDM4-202ENST00000586080 SPINK5Q9NQ38 1064 aaPredicted RBP27.92■■■□□ 2.06
R3HDM4-202ENST00000586080 CNKSR1Q969H4 720 aa27.91■■■□□ 2.06
R3HDM4-202ENST00000586080 DLEC1Q9Y238 1755 aa27.91■■■□□ 2.06
R3HDM4-202ENST00000586080 NPR1P16066 1061 aa27.9■■■□□ 2.06
R3HDM4-202ENST00000586080 RIC3Q7Z5B4 369 aa27.9■■■□□ 2.06
R3HDM4-202ENST00000586080 NLRP10Q86W26 655 aa27.9■■■□□ 2.06
R3HDM4-202ENST00000586080 ZNF428Q96B54 188 aa27.9■■■□□ 2.06
R3HDM4-202ENST00000586080 EXOSC9Q06265 439 aaKnown RBP27.89■■■□□ 2.06
R3HDM4-202ENST00000586080 PRPF40BQ6NWY9 871 aaKnown RBP27.88■■■□□ 2.05
R3HDM4-202ENST00000586080 ARFGEF1Q9Y6D6 1849 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms