RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 STARD3NLO95772 234 aa18.59■□□□□ 0.57
CDK5RAP3-236ENST00000584991 PTF1AQ7RTS3 328 aa18.59■□□□□ 0.57
CDK5RAP3-236ENST00000584991 ANTXR1Q9H6X2 564 aa18.59■□□□□ 0.57
CDK5RAP3-236ENST00000584991 PALLDQ8WX93 1383 aa18.59■□□□□ 0.57
CDK5RAP3-236ENST00000584991 NUCB1Q02818 461 aa18.58■□□□□ 0.57
CDK5RAP3-236ENST00000584991 SMARCC1Q92922 1105 aaPredicted RBP18.58■□□□□ 0.57
CDK5RAP3-236ENST00000584991 GCC1Q96CN9 775 aa18.58■□□□□ 0.57
CDK5RAP3-236ENST00000584991 SRCIN1Q9C0H9 1055 aa18.58■□□□□ 0.57
CDK5RAP3-236ENST00000584991 BEND3Q5T5X7 828 aa18.58■□□□□ 0.56
CDK5RAP3-236ENST00000584991 RIC3Q7Z5B4 369 aa18.58■□□□□ 0.56
CDK5RAP3-236ENST00000584991 BTAF1O14981 1849 aa18.58■□□□□ 0.56
CDK5RAP3-236ENST00000584991 LOC102724428A0A0B4J2F2 783 aa18.57■□□□□ 0.56
CDK5RAP3-236ENST00000584991 CYP19A1P11511 503 aaPredicted RBP18.57■□□□□ 0.56
CDK5RAP3-236ENST00000584991 SIK1P57059 783 aa18.57■□□□□ 0.56
CDK5RAP3-236ENST00000584991 ANKRD13DQ6ZTN6 518 aa18.57■□□□□ 0.56
CDK5RAP3-236ENST00000584991 ATP6V1AP38606 617 aa18.56■□□□□ 0.56
CDK5RAP3-236ENST00000584991 C22orf23Q9BZE7 217 aa18.56■□□□□ 0.56
CDK5RAP3-236ENST00000584991 ATP10DQ9P241 1426 aa18.56■□□□□ 0.56
CDK5RAP3-236ENST00000584991 KRT27Q7Z3Y8 459 aa18.56■□□□□ 0.56
CDK5RAP3-236ENST00000584991 TBC1D2Q9BYX2 928 aa18.56■□□□□ 0.56
CDK5RAP3-236ENST00000584991 ARFGEF2Q9Y6D5 1785 aa18.55■□□□□ 0.56
CDK5RAP3-236ENST00000584991 TTLL7Q6ZT98 887 aa18.54■□□□□ 0.56
CDK5RAP3-236ENST00000584991 USP44Q9H0E7 712 aa18.54■□□□□ 0.56
CDK5RAP3-236ENST00000584991 ZNF330Q9Y3S2 320 aaPredicted RBP18.54■□□□□ 0.56
CDK5RAP3-236ENST00000584991 GNAI3P08754 354 aa18.53■□□□□ 0.56
CDK5RAP3-236ENST00000584991 RXRBP28702 533 aa18.53■□□□□ 0.56
CDK5RAP3-236ENST00000584991 ITPK1Q13572 414 aa18.53■□□□□ 0.56
CDK5RAP3-236ENST00000584991 CHD1LQ86WJ1 897 aa18.53■□□□□ 0.56
CDK5RAP3-236ENST00000584991 PLBD2Q8NHP8 589 aa18.53■□□□□ 0.56
CDK5RAP3-236ENST00000584991 METTL22Q9BUU2 404 aaPredicted RBP18.53■□□□□ 0.56
CDK5RAP3-236ENST00000584991 CICQ96RK0 1608 aaPredicted RBP18.52■□□□□ 0.56
CDK5RAP3-236ENST00000584991 ALDH1L1O75891 902 aa18.52■□□□□ 0.56
CDK5RAP3-236ENST00000584991 RBM25P49756 843 aaKnown RBP18.52■□□□□ 0.56
CDK5RAP3-236ENST00000584991 CWF19L2Q2TBE0 894 aaKnown RBP18.52■□□□□ 0.56
CDK5RAP3-236ENST00000584991 BMP2KLQ5H9B9 411 aa18.52■□□□□ 0.56
CDK5RAP3-236ENST00000584991 MYD88Q99836 296 aa18.52■□□□□ 0.56
CDK5RAP3-236ENST00000584991 RGS17Q9UGC6 210 aaPredicted RBP18.52■□□□□ 0.56
CDK5RAP3-236ENST00000584991 ZBTB1Q9Y2K1 713 aa18.52■□□□□ 0.56
CDK5RAP3-236ENST00000584991 NEXNQ0ZGT2 675 aa18.52■□□□□ 0.55
CDK5RAP3-236ENST00000584991 FAM196AQ6ZSG2 479 aa18.52■□□□□ 0.55
CDK5RAP3-236ENST00000584991 SIRT2Q8IXJ6 389 aa18.52■□□□□ 0.55
CDK5RAP3-236ENST00000584991 LINS1Q8NG48 757 aa18.52■□□□□ 0.55
CDK5RAP3-236ENST00000584991 NUP188Q5SRE5 1749 aa18.51■□□□□ 0.55
CDK5RAP3-236ENST00000584991 ZNF831Q5JPB2 1677 aa18.51■□□□□ 0.55
CDK5RAP3-236ENST00000584991 GNAI2P04899 355 aa18.51■□□□□ 0.55
CDK5RAP3-236ENST00000584991 IGKV5-2P06315 115 aa18.5■□□□□ 0.55
CDK5RAP3-236ENST00000584991 UBTFL1P0CB47 393 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-236ENST00000584991 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
CDK5RAP3-236ENST00000584991 AFDNP55196 1824 aaKnown RBP18.5■□□□□ 0.55
CDK5RAP3-236ENST00000584991 NBPF7P0C2Y1 421 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-236ENST00000584991 COL5A3P25940 1745 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-236ENST00000584991 CRKLP46109 303 aaKnown RBP18.5■□□□□ 0.55
CDK5RAP3-236ENST00000584991 CEP85Q6P2H3 762 aa18.5■□□□□ 0.55
CDK5RAP3-236ENST00000584991 RPAP2Q8IXW5 612 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-236ENST00000584991 SNX21Q969T3 373 aa18.5■□□□□ 0.55
CDK5RAP3-236ENST00000584991 BCL11BQ9C0K0 894 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-236ENST00000584991 MYH14Q7Z406 1995 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP3-236ENST00000584991 KCNQ4P56696 695 aa18.49■□□□□ 0.55
CDK5RAP3-236ENST00000584991 INTS5Q6P9B9 1019 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP3-236ENST00000584991 ANKRD44Q8N8A2 993 aa18.49■□□□□ 0.55
CDK5RAP3-236ENST00000584991 ARXQ96QS3 562 aa18.49■□□□□ 0.55
CDK5RAP3-236ENST00000584991 CCDC87Q9NVE4 849 aa18.49■□□□□ 0.55
CDK5RAP3-236ENST00000584991 NEURL1BA8MQ27 555 aa18.48■□□□□ 0.55
CDK5RAP3-236ENST00000584991 IL6STP40189 918 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP3-236ENST00000584991 POTEAQ6S8J7 498 aa18.48■□□□□ 0.55
CDK5RAP3-236ENST00000584991 C9orf78Q9NZ63 289 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP3-236ENST00000584991 CHMP5Q9NZZ3 219 aa18.48■□□□□ 0.55
CDK5RAP3-236ENST00000584991 LRRFIP2Q9Y608 721 aaKnown RBP18.48■□□□□ 0.55
CDK5RAP3-236ENST00000584991 LY75O60449 1722 aa18.48■□□□□ 0.55
CDK5RAP3-236ENST00000584991 KIF6Q6ZMV9 814 aa18.48■□□□□ 0.55
CDK5RAP3-236ENST00000584991 RREB1Q92766 1687 aa18.47■□□□□ 0.55
CDK5RAP3-236ENST00000584991 ATP5J2-PTCD1G3V325 749 aa18.47■□□□□ 0.55
CDK5RAP3-236ENST00000584991 LINC00116Q8NCU8 138 aa18.47■□□□□ 0.55
CDK5RAP3-236ENST00000584991 SLKQ9H2G2 1235 aaPredicted RBP18.46■□□□□ 0.55
CDK5RAP3-236ENST00000584991 GRM8O00222 908 aa18.46■□□□□ 0.54
CDK5RAP3-236ENST00000584991 TRIM37O94972 964 aa18.46■□□□□ 0.54
CDK5RAP3-236ENST00000584991 MFAP1P55081 439 aaKnown RBP18.46■□□□□ 0.54
CDK5RAP3-236ENST00000584991 GCKRQ14397 625 aa18.46■□□□□ 0.54
CDK5RAP3-236ENST00000584991 HSCBQ8IWL3 235 aa18.46■□□□□ 0.54
CDK5RAP3-236ENST00000584991 EIF5P55010 431 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP3-236ENST00000584991 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP3-236ENST00000584991 CCNL1Q9UK58 526 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP3-236ENST00000584991 MAP3K15Q6ZN16 1313 aa18.45■□□□□ 0.54
CDK5RAP3-236ENST00000584991 DZIP3Q86Y13 1208 aaKnown RBP18.43■□□□□ 0.54
CDK5RAP3-236ENST00000584991 TBC1D2BQ9UPU7 963 aa18.43■□□□□ 0.54
CDK5RAP3-236ENST00000584991 UTYO14607 1347 aa18.43■□□□□ 0.54
CDK5RAP3-236ENST00000584991 IBTKQ9P2D0 1353 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-236ENST00000584991 EP400Q96L91 3159 aa18.43■□□□□ 0.54
CDK5RAP3-236ENST00000584991 ATP8B2P98198 1209 aa18.43■□□□□ 0.54
CDK5RAP3-236ENST00000584991 CIZ1Q9ULV3 898 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-236ENST00000584991 TAF1LQ8IZX4 1826 aa18.43■□□□□ 0.54
CDK5RAP3-236ENST00000584991 HMMRO75330 724 aa18.42■□□□□ 0.54
CDK5RAP3-236ENST00000584991 TCIRG1Q13488 830 aa18.42■□□□□ 0.54
CDK5RAP3-236ENST00000584991 HLFQ16534 295 aa18.42■□□□□ 0.54
CDK5RAP3-236ENST00000584991 LNPKQ9C0E8 428 aa18.42■□□□□ 0.54
CDK5RAP3-236ENST00000584991 NUP98P52948 1817 aa18.42■□□□□ 0.54
CDK5RAP3-236ENST00000584991 PNMA6EA0A0J9YXQ4 647 aa18.41■□□□□ 0.54
CDK5RAP3-236ENST00000584991 ANKRD45Q5TZF3 282 aa18.41■□□□□ 0.54
CDK5RAP3-236ENST00000584991 GIGYF2Q6Y7W6 1299 aaKnown RBP18.41■□□□□ 0.54
CDK5RAP3-236ENST00000584991 DCTPP1Q9H773 170 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms