RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 KIF6Q6ZMV9 814 aa17.23■□□□□ 0.35
NUP85-215ENST00000580879 LRP10Q7Z4F1 713 aa17.23■□□□□ 0.35
NUP85-215ENST00000580879 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
NUP85-215ENST00000580879 CARMIL3Q8ND23 1372 aa17.23■□□□□ 0.35
NUP85-215ENST00000580879 KIF13BQ9NQT8 1826 aa17.23■□□□□ 0.35
NUP85-215ENST00000580879 KIAA1551Q9HCM1 1747 aa17.22■□□□□ 0.35
NUP85-215ENST00000580879 AFDNP55196 1824 aaKnown RBP17.22■□□□□ 0.35
NUP85-215ENST00000580879 CHRNA5P30532 468 aa17.22■□□□□ 0.35
NUP85-215ENST00000580879 CLEC4GQ6UXB4 293 aa17.22■□□□□ 0.35
NUP85-215ENST00000580879 CHPF2Q9P2E5 772 aa17.22■□□□□ 0.35
NUP85-215ENST00000580879 N4BP2Q86UW6 1770 aaPredicted RBP17.22■□□□□ 0.35
NUP85-215ENST00000580879 MAP3K15Q6ZN16 1313 aa17.21■□□□□ 0.35
NUP85-215ENST00000580879 FAM177BA6PVY3 158 aa17.21■□□□□ 0.35
NUP85-215ENST00000580879 AIMP1Q12904 312 aaKnown RBP17.21■□□□□ 0.35
NUP85-215ENST00000580879 DIEXFQ68CQ4 756 aaKnown RBP17.21■□□□□ 0.35
NUP85-215ENST00000580879 PRR5LQ6MZQ0 368 aa17.21■□□□□ 0.35
NUP85-215ENST00000580879 C8orf58Q8NAV2 365 aa17.21■□□□□ 0.35
NUP85-215ENST00000580879 NIP7Q9Y221 180 aaKnown RBP eCLIP17.21■□□□□ 0.35
NUP85-215ENST00000580879 NPHP1O15259 732 aa17.2■□□□□ 0.34
NUP85-215ENST00000580879 HOXB7P09629 217 aa17.2■□□□□ 0.34
NUP85-215ENST00000580879 KCNA3P22001 575 aa17.2■□□□□ 0.34
NUP85-215ENST00000580879 XAGE3Q8WTP9 111 aa17.2■□□□□ 0.34
NUP85-215ENST00000580879 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
NUP85-215ENST00000580879 NRXN2Q9P2S2 1712 aa17.2■□□□□ 0.34
NUP85-215ENST00000580879 ERVV-1B6SEH8 477 aa17.19■□□□□ 0.34
NUP85-215ENST00000580879 CCER2I3L3R5 266 aa17.19■□□□□ 0.34
NUP85-215ENST00000580879 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
NUP85-215ENST00000580879 COPS6Q7L5N1 327 aa17.19■□□□□ 0.34
NUP85-215ENST00000580879 NBPF5PQ86XG9 351 aaPredicted RBP17.19■□□□□ 0.34
NUP85-215ENST00000580879 TSPYL6Q8N831 410 aa17.19■□□□□ 0.34
NUP85-215ENST00000580879 CNBD1Q8NA66 436 aa17.19■□□□□ 0.34
NUP85-215ENST00000580879 BCS1LQ9Y276 419 aa17.19■□□□□ 0.34
NUP85-215ENST00000580879 GRIN3BO60391 1043 aa17.18■□□□□ 0.34
NUP85-215ENST00000580879 GPTP24298 496 aa17.18■□□□□ 0.34
NUP85-215ENST00000580879 YY1P25490 414 aa17.18■□□□□ 0.34
NUP85-215ENST00000580879 IL16Q14005 1332 aa17.18■□□□□ 0.34
NUP85-215ENST00000580879 RGL2O15211 777 aa17.17■□□□□ 0.34
NUP85-215ENST00000580879 C2CD5Q86YS7 1000 aa17.17■□□□□ 0.34
NUP85-215ENST00000580879 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
NUP85-215ENST00000580879 MIER1Q8N108 512 aa17.17■□□□□ 0.34
NUP85-215ENST00000580879 DBF4Q9UBU7 674 aaPredicted RBP17.17■□□□□ 0.34
NUP85-215ENST00000580879 ST5P78524 1137 aa17.16■□□□□ 0.34
NUP85-215ENST00000580879 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
NUP85-215ENST00000580879 PIM2Q9P1W9 311 aa17.16■□□□□ 0.34
NUP85-215ENST00000580879 FANCIQ9NVI1 1328 aa17.16■□□□□ 0.34
NUP85-215ENST00000580879 GIGYF2Q6Y7W6 1299 aaKnown RBP17.15■□□□□ 0.34
NUP85-215ENST00000580879 BRIP1Q9BX63 1249 aa17.15■□□□□ 0.34
NUP85-215ENST00000580879 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
NUP85-215ENST00000580879 ATP10DQ9P241 1426 aa17.14■□□□□ 0.33
NUP85-215ENST00000580879 H0YIN7 160 aa17.14■□□□□ 0.33
NUP85-215ENST00000580879 TCERG1O14776 1098 aaKnown RBP17.14■□□□□ 0.33
NUP85-215ENST00000580879 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
NUP85-215ENST00000580879 TPTE2Q6XPS3 522 aa17.14■□□□□ 0.33
NUP85-215ENST00000580879 NUP98P52948 1817 aa17.14■□□□□ 0.33
NUP85-215ENST00000580879 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
NUP85-215ENST00000580879 PDE6BP35913 854 aa17.13■□□□□ 0.33
NUP85-215ENST00000580879 NUTM1Q86Y26 1132 aa17.13■□□□□ 0.33
NUP85-215ENST00000580879 ZNF34Q8IZ26 560 aa17.13■□□□□ 0.33
NUP85-215ENST00000580879 ZNF428Q96B54 188 aa17.13■□□□□ 0.33
NUP85-215ENST00000580879 PHAXQ9H814 394 aaKnown RBP17.13■□□□□ 0.33
NUP85-215ENST00000580879 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
NUP85-215ENST00000580879 ANKRD31Q8N7Z5 1873 aa17.13■□□□□ 0.33
NUP85-215ENST00000580879 TWISTNBQ3B726 338 aaPredicted RBP17.12■□□□□ 0.33
NUP85-215ENST00000580879 SUSD4Q5VX71 490 aa17.12■□□□□ 0.33
NUP85-215ENST00000580879 ZNF622Q969S3 477 aaKnown RBP eCLIP17.12■□□□□ 0.33
NUP85-215ENST00000580879 BRCA1P38398 1863 aaKnown RBP17.12■□□□□ 0.33
NUP85-215ENST00000580879 EXOSC9Q06265 439 aaKnown RBP17.11■□□□□ 0.33
NUP85-215ENST00000580879 ERFEQ4G0M1 354 aa17.11■□□□□ 0.33
NUP85-215ENST00000580879 CCDC30Q5VVM6 783 aa17.11■□□□□ 0.33
NUP85-215ENST00000580879 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
NUP85-215ENST00000580879 ABCC12Q96J65 1359 aa17.11■□□□□ 0.33
NUP85-215ENST00000580879 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
NUP85-215ENST00000580879 ANKRD13DQ6ZTN6 518 aa17.1■□□□□ 0.33
NUP85-215ENST00000580879 ARHGAP27Q6ZUM4 889 aa17.1■□□□□ 0.33
NUP85-215ENST00000580879 PLBD2Q8NHP8 589 aa17.1■□□□□ 0.33
NUP85-215ENST00000580879 NYXQ9GZU5 481 aa17.1■□□□□ 0.33
NUP85-215ENST00000580879 COL11A2P13942 1736 aaPredicted RBP17.1■□□□□ 0.33
NUP85-215ENST00000580879 NTSR2O95665 410 aa17.09■□□□□ 0.33
NUP85-215ENST00000580879 TCIRG1Q13488 830 aa17.09■□□□□ 0.33
NUP85-215ENST00000580879 HSP90AB3PQ58FF7 597 aa17.09■□□□□ 0.33
NUP85-215ENST00000580879 TTLL6Q8N841 843 aa17.09■□□□□ 0.33
NUP85-215ENST00000580879 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
NUP85-215ENST00000580879 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
NUP85-215ENST00000580879 CHD4Q14839 1912 aa17.09■□□□□ 0.33
NUP85-215ENST00000580879 ATP5J2-PTCD1G3V325 749 aa17.08■□□□□ 0.32
NUP85-215ENST00000580879 SRGNP10124 158 aa17.08■□□□□ 0.32
NUP85-215ENST00000580879 PARP10Q53GL7 1025 aa17.08■□□□□ 0.32
NUP85-215ENST00000580879 RIC3Q7Z5B4 369 aa17.08■□□□□ 0.32
NUP85-215ENST00000580879 NLRP10Q86W26 655 aa17.08■□□□□ 0.32
NUP85-215ENST00000580879 STK31Q9BXU1 1019 aa17.08■□□□□ 0.32
NUP85-215ENST00000580879 IBTKQ9P2D0 1353 aaPredicted RBP17.07■□□□□ 0.32
NUP85-215ENST00000580879 PPP1R42Q7Z4L9 355 aa17.07■□□□□ 0.32
NUP85-215ENST00000580879 UTP14AQ9BVJ6 771 aaKnown RBP17.07■□□□□ 0.32
NUP85-215ENST00000580879 CHMP4AQ9BY43 222 aa17.07■□□□□ 0.32
NUP85-215ENST00000580879 PDZRN3Q9UPQ7 1066 aa17.07■□□□□ 0.32
NUP85-215ENST00000580879 DLEC1Q9Y238 1755 aa17.07■□□□□ 0.32
NUP85-215ENST00000580879 VAMP4O75379 141 aa17.06■□□□□ 0.32
NUP85-215ENST00000580879 G2E3Q7L622 706 aa17.06■□□□□ 0.32
NUP85-215ENST00000580879 MASTLQ96GX5 879 aa17.06■□□□□ 0.32
NUP85-215ENST00000580879 TNRC6CQ9HCJ0 1690 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms